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The map label for this gene is 15898474

Identifier: 15898474

GI number: 15898474

Start: 1510060

End: 1510713

Strand: Direct

Name: 15898474

Synonym: SSO1656

Alternate gene names: NA

Gene position: 1510060-1510713 (Clockwise)

Preceding gene: 15898473

Following gene: 15898475

Centisome position: 50.47

GC content: 32.26

Gene sequence:

>654_bases
ATGAAAAGAGGGTGGTTGTTTGACTTCGGAAAGAATATAAGAGAAGAAATTGATGATGGTAGAGCCAGTAGGGGAAGAGA
ATATGTAAGAAATGGTGCGGTGAGAAAGATAGAGATAAACCCTGGAAAAATAGCAGCCCAAGTTTCAGGCACAAAGTTAT
ACGATGTTAATATATATGGTAATACTCTTTCTGAAGAAGATAAAAGAAAAGTGATAAATATAATTAATAAAAAAGGTTAT
TTATCGTCTCTGCTTTCCTATAAGTTTCCTACATCCATAATTGACGATTTAGATGAAGAAGGTATCGAGTTAATTCCAAG
AAATTTATCTTATGAATGCACTTGTCCAGATTACCAAAGACCTTGTAAGCACATATACGCCGTATATCTTACTGCATATG
ATATAATTAGTAATAACCCGCTTCTTTTATTTAAGTTTCTTGGTATAAATAAAGAGGAATTAATTTATGAGAAAGGACAG
AAAATAATGCAGGAAATTTCAGTAAAAGACTTCCAGAGGAAATATGAATTTCCAAGTATAAAATTCGTGAACGCTAAGCC
ATGGAATAAGTTTGGCAATGATAAGGAAGTTGTAAAACACATGTATATGCTGATCATGAAAACTGCTGAGAGAAAAATAG
ACGAACTTAAGTAA

Upstream 100 bases:

>100_bases
CGTTATTTAAGGATATAATATCTTCTGGAGACTCGTGGATTACTGAACTAAGTACAGAGGAATTAAGGAAGGTGATAGAA
CTCTCTGTAGGTGGATATTA

Downstream 100 bases:

>100_bases
CGTCCTCCCGCTTAGTTAGTCTGTTGAATATTTTTAAATTAAATCACTATTATCTCCCTTTCAATTAATCTCAGGGTGTA
CAATTTAGGCTTGCGAGATC

Product: hypothetical protein

Products: NA

Alternate protein names: Zinc Finger SWIM Domain-Containing Protein; Zinc Finger SWIM-Type; SWIM Zinc Finger Domain Protein; SWIM Zinc Finger Domain-Containing Protein; Swim Zinc Finger Domain Protein; Non-Specific Serine/Threonine Protein Kinase; SNF2-Related Protein; SWIM Zinc-Finger Protein; SNF2 Family Helicase; Swim Zn-Finger Containing Protein; Helicase SNF2 Family; Zinc Finger Protein; Zinc Finger Domain-Containing Protein; SWIM Zinc Finger Containing Protein; Zinc Finger Swim Domain-Containing Protein; Snf2 Family Protein; Helicase

Number of amino acids: Translated: 217; Mature: 217

Protein sequence:

>217_residues
MKRGWLFDFGKNIREEIDDGRASRGREYVRNGAVRKIEINPGKIAAQVSGTKLYDVNIYGNTLSEEDKRKVINIINKKGY
LSSLLSYKFPTSIIDDLDEEGIELIPRNLSYECTCPDYQRPCKHIYAVYLTAYDIISNNPLLLFKFLGINKEELIYEKGQ
KIMQEISVKDFQRKYEFPSIKFVNAKPWNKFGNDKEVVKHMYMLIMKTAERKIDELK

Sequences:

>Translated_217_residues
MKRGWLFDFGKNIREEIDDGRASRGREYVRNGAVRKIEINPGKIAAQVSGTKLYDVNIYGNTLSEEDKRKVINIINKKGY
LSSLLSYKFPTSIIDDLDEEGIELIPRNLSYECTCPDYQRPCKHIYAVYLTAYDIISNNPLLLFKFLGINKEELIYEKGQ
KIMQEISVKDFQRKYEFPSIKFVNAKPWNKFGNDKEVVKHMYMLIMKTAERKIDELK
>Mature_217_residues
MKRGWLFDFGKNIREEIDDGRASRGREYVRNGAVRKIEINPGKIAAQVSGTKLYDVNIYGNTLSEEDKRKVINIINKKGY
LSSLLSYKFPTSIIDDLDEEGIELIPRNLSYECTCPDYQRPCKHIYAVYLTAYDIISNNPLLLFKFLGINKEELIYEKGQ
KIMQEISVKDFQRKYEFPSIKFVNAKPWNKFGNDKEVVKHMYMLIMKTAERKIDELK

Specific function: Unknown

COG id: COG4279

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 25383; Mature: 25383

Theoretical pI: Translated: 9.30; Mature: 9.30

Prosite motif: PS50966 ZF_SWIM

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRGWLFDFGKNIREEIDDGRASRGREYVRNGAVRKIEINPGKIAAQVSGTKLYDVNIYG
CCCCCCHHHHHHHHHHHHCCHHHCCHHHHHCCCEEEEEECCCEEEEEECCCEEEEEEEEC
NTLSEEDKRKVINIINKKGYLSSLLSYKFPTSIIDDLDEEGIELIPRNLSYECTCPDYQR
CCCCHHHHHHHHHHHCCCHHHHHHHHHCCCHHHHHHCCCCCHHCCCCCCCEEECCCCHHH
PCKHIYAVYLTAYDIISNNPLLLFKFLGINKEELIYEKGQKIMQEISVKDFQRKYEFPSI
HHHHHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCE
KFVNAKPWNKFGNDKEVVKHMYMLIMKTAERKIDELK
EEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MKRGWLFDFGKNIREEIDDGRASRGREYVRNGAVRKIEINPGKIAAQVSGTKLYDVNIYG
CCCCCCHHHHHHHHHHHHCCHHHCCHHHHHCCCEEEEEECCCEEEEEECCCEEEEEEEEC
NTLSEEDKRKVINIINKKGYLSSLLSYKFPTSIIDDLDEEGIELIPRNLSYECTCPDYQR
CCCCHHHHHHHHHHHCCCHHHHHHHHHCCCHHHHHHCCCCCHHCCCCCCCEEECCCCHHH
PCKHIYAVYLTAYDIISNNPLLLFKFLGINKEELIYEKGQKIMQEISVKDFQRKYEFPSI
HHHHHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCE
KFVNAKPWNKFGNDKEVVKHMYMLIMKTAERKIDELK
EEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA