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The map label for this gene is 15898309

Identifier: 15898309

GI number: 15898309

Start: 1336991

End: 1337419

Strand: Reverse

Name: 15898309

Synonym: SSO1479

Alternate gene names: NA

Gene position: 1337419-1336991 (Counterclockwise)

Preceding gene: 15898310

Following gene: 15898308

Centisome position: 44.7

GC content: 42.66

Gene sequence:

>429_bases
ATGGTAAAGGCAATTTCAACTGAAAAGGACCTCTTACTCAAGGTGGATAAATCCTTCCCTTGGGAAACGTTTAGGAGTAA
GCTTAAGTCCCTTTACTCCAAGAAGCCCAAGTGGGACGTCATCTTACTCCTCAAAGTCCTCCTAATCAAGTTCGTTTTCG
ACATCTCTTGGAATAACTTGGAGGGAGAAATTAGGGACAGTAAGAGGTTTATGGACTTCTTGGGCGGGAAAGTTCCACCA
AAGAGCACAGTATTCTTCTTCTACAAGAAACTTCAACAAACAGTTATTCAAGAGGGCGAGACGATGAGAACAACACTGAT
GGATGAGTTAAACAAGGCTTTGGACAAGGTGATCAGCGAGTATAGGGAAAAGGGCTTTGAACTTGAAGTTGGGAGAGAAA
AAACGATAGGTTCGAGGACTACCACATAA

Upstream 100 bases:

>100_bases
CACTCTGTTCGTCCAGCGGTAGACCACGGGACGTTATCCAAGTTGATTAAAATGGCAATTCATGAGTAATATTAATAAGA
AATTAGGATGAGATAATATT

Downstream 100 bases:

>100_bases
TTGACACATTCTTCCGTGAGGCCTACCCCGGAAAGAGGAGTCTTCAAAACGGTCTTGAGAAGATCTCACTTGACCTTAAG
GAGATGGGGTTCAATGACGT

Product: transposon ISC1212 Orf1

Products: NA

Alternate protein names: Partial ORF In Transposon ISC

Number of amino acids: Translated: 142; Mature: 142

Protein sequence:

>142_residues
MVKAISTEKDLLLKVDKSFPWETFRSKLKSLYSKKPKWDVILLLKVLLIKFVFDISWNNLEGEIRDSKRFMDFLGGKVPP
KSTVFFFYKKLQQTVIQEGETMRTTLMDELNKALDKVISEYREKGFELEVGREKTIGSRTTT

Sequences:

>Translated_142_residues
MVKAISTEKDLLLKVDKSFPWETFRSKLKSLYSKKPKWDVILLLKVLLIKFVFDISWNNLEGEIRDSKRFMDFLGGKVPP
KSTVFFFYKKLQQTVIQEGETMRTTLMDELNKALDKVISEYREKGFELEVGREKTIGSRTTT
>Mature_142_residues
MVKAISTEKDLLLKVDKSFPWETFRSKLKSLYSKKPKWDVILLLKVLLIKFVFDISWNNLEGEIRDSKRFMDFLGGKVPP
KSTVFFFYKKLQQTVIQEGETMRTTLMDELNKALDKVISEYREKGFELEVGREKTIGSRTTT

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16650; Mature: 16650

Theoretical pI: Translated: 10.23; Mature: 10.23

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVKAISTEKDLLLKVDKSFPWETFRSKLKSLYSKKPKWDVILLLKVLLIKFVFDISWNNL
CCCCCCCCCHHHEEECCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCC
EGEIRDSKRFMDFLGGKVPPKSTVFFFYKKLQQTVIQEGETMRTTLMDELNKALDKVISE
CCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH
YREKGFELEVGREKTIGSRTTT
HHHCCCEEECCCCCCCCCCCCC
>Mature Secondary Structure
MVKAISTEKDLLLKVDKSFPWETFRSKLKSLYSKKPKWDVILLLKVLLIKFVFDISWNNL
CCCCCCCCCHHHEEECCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCC
EGEIRDSKRFMDFLGGKVPPKSTVFFFYKKLQQTVIQEGETMRTTLMDELNKALDKVISE
CCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH
YREKGFELEVGREKTIGSRTTT
HHHCCCEEECCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA