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The map label for this gene is 15898303

Identifier: 15898303

GI number: 15898303

Start: 1332122

End: 1332589

Strand: Reverse

Name: 15898303

Synonym: SSO1471

Alternate gene names: NA

Gene position: 1332589-1332122 (Counterclockwise)

Preceding gene: 15898308

Following gene: 15898302

Centisome position: 44.53

GC content: 33.55

Gene sequence:

>468_bases
ATGGAAAAAGAGATTGTTGAAGCATTTCTGAAAGTTTACGGTGACAACTTAGTCTCCATCGTCCTTTTTGGATCTTATGC
TAGAGGGGATCAGAGGAAAGATAGTGACATTGATTTGCTTATAGTTCTTGATAAAATTGAAGATAGATATGAAGTATTCA
AAAAATTCTTTGAAGTAGAAAAGATCCTAGATCTCACTGTATATAAGGAGTTAAGGCAAAAGGGTTATAATCCCTACGTT
TCGCCAATTTTCCTTGATGTTGAAAAAGCTACTAAGTTTAGACCACTATACATTGACATAGTGTTTGATGCTAAGATACT
TTATGATAAAAACGATGTTATGAAAAACACTTTTGAGAGAGTTAGAAAAAGACTTGAGGAGCTAGGTGCAGTGAGGAAGA
AGAAAGGGAGAATATATTATGTGATACTAACTAAGGTAAAACCTGGAGAGGTTATAAAGTATGAATAG

Upstream 100 bases:

>100_bases
CGTATTATTTACAAATTACAATTCGCAGAAGACACATGAATCGCACTCAACTACTACAAAGGCAATAAAAATAAAATTAG
TAGATCAGTACTCTTTTACT

Downstream 100 bases:

>100_bases
TAAGGAAATTGCTGAAGGTTATTTAAGAGAAGCTAAAATAAGGATTAAGTATGCGGAACTTAGCCTTAATGAGGATAAGG
ATTACGCTTTTTGTGTTAGA

Product: hypothetical protein

Products: NA

Alternate protein names: DNA Polymerase Beta Domain-Containing Protein; Nucleotidyltransferase/HEPN Domain-Containing Protein; DNA Polymerase Beta Subunit

Number of amino acids: Translated: 155; Mature: 155

Protein sequence:

>155_residues
MEKEIVEAFLKVYGDNLVSIVLFGSYARGDQRKDSDIDLLIVLDKIEDRYEVFKKFFEVEKILDLTVYKELRQKGYNPYV
SPIFLDVEKATKFRPLYIDIVFDAKILYDKNDVMKNTFERVRKRLEELGAVRKKKGRIYYVILTKVKPGEVIKYE

Sequences:

>Translated_155_residues
MEKEIVEAFLKVYGDNLVSIVLFGSYARGDQRKDSDIDLLIVLDKIEDRYEVFKKFFEVEKILDLTVYKELRQKGYNPYV
SPIFLDVEKATKFRPLYIDIVFDAKILYDKNDVMKNTFERVRKRLEELGAVRKKKGRIYYVILTKVKPGEVIKYE
>Mature_155_residues
MEKEIVEAFLKVYGDNLVSIVLFGSYARGDQRKDSDIDLLIVLDKIEDRYEVFKKFFEVEKILDLTVYKELRQKGYNPYV
SPIFLDVEKATKFRPLYIDIVFDAKILYDKNDVMKNTFERVRKRLEELGAVRKKKGRIYYVILTKVKPGEVIKYE

Specific function: Unknown

COG id: COG1708

COG function: function code R; Predicted nucleotidyltransferases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18420; Mature: 18420

Theoretical pI: Translated: 9.48; Mature: 9.48

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEKEIVEAFLKVYGDNLVSIVLFGSYARGDQRKDSDIDLLIVLDKIEDRYEVFKKFFEVE
CCHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCEEEEEEECCHHHHHHHHHHHHHH
KILDLTVYKELRQKGYNPYVSPIFLDVEKATKFRPLYIDIVFDAKILYDKNDVMKNTFER
HHHHHHHHHHHHHCCCCCCCCCEEEEEHHCCCCCEEEEEEEEEEEEEECCHHHHHHHHHH
VRKRLEELGAVRKKKGRIYYVILTKVKPGEVIKYE
HHHHHHHHHHHHHHCCCEEEEEEEECCCCCEEECC
>Mature Secondary Structure
MEKEIVEAFLKVYGDNLVSIVLFGSYARGDQRKDSDIDLLIVLDKIEDRYEVFKKFFEVE
CCHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCEEEEEEECCHHHHHHHHHHHHHH
KILDLTVYKELRQKGYNPYVSPIFLDVEKATKFRPLYIDIVFDAKILYDKNDVMKNTFER
HHHHHHHHHHHHHCCCCCCCCCEEEEEHHCCCCCEEEEEEEEEEEEEECCHHHHHHHHHH
VRKRLEELGAVRKKKGRIYYVILTKVKPGEVIKYE
HHHHHHHHHHHHHHCCCEEEEEEEECCCCCEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA