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The map label for this gene is 15898302

Identifier: 15898302

GI number: 15898302

Start: 1331704

End: 1332129

Strand: Reverse

Name: 15898302

Synonym: SSO1470

Alternate gene names: NA

Gene position: 1332129-1331704 (Counterclockwise)

Preceding gene: 15898303

Following gene: 15898301

Centisome position: 44.52

GC content: 33.8

Gene sequence:

>426_bases
ATGAATAGTAAGGAAATTGCTGAAGGTTATTTAAGAGAAGCTAAAATAAGGATTAAGTATGCGGAACTTAGCCTTAATGA
GGATAAGGATTACGCTTTTTGTGTTAGAGCTTCACAAGAAATAGTTGAATTGTCTATAAAAGCAATTTTACGCTTATTGG
GAATTGAGTATGGAAAGATCCACGATCCGGGTAAGATATTAGTTGAAAATATGGATAGATTACCATCATGGTTAAAAAAG
GAAGCTGAAAATATAGCTTATATCTCACGATGGTTAAGGGCTGAGAGAGAACCATCAATGTACGGTGACGAAGTTGAAGG
AATACCTCCTACAGAGCTTTATACTGAAAGTTATTGCAGAAAAGCATTAGAATCAGCAAAGTACGTATATGAGTTATCAC
TCAAACTGTATAACGAAATTAAATAA

Upstream 100 bases:

>100_bases
GTTAGAAAAAGACTTGAGGAGCTAGGTGCAGTGAGGAAGAAGAAAGGGAGAATATATTATGTGATACTAACTAAGGTAAA
ACCTGGAGAGGTTATAAAGT

Downstream 100 bases:

>100_bases
GTTAAATCAAGACAAGAAAGGGTTGATACTTTAAACGTTATTTACGTATATGCTTTGTGGATCTCTTCAATTTTTATCTG
AGATAACGTTAGTGCTTTCA

Product: hypothetical protein

Products: NA

Alternate protein names: HEPN Domain-Containing Protein; Nucleotidyltransferase/HEPN Domain-Containing Protein

Number of amino acids: Translated: 141; Mature: 141

Protein sequence:

>141_residues
MNSKEIAEGYLREAKIRIKYAELSLNEDKDYAFCVRASQEIVELSIKAILRLLGIEYGKIHDPGKILVENMDRLPSWLKK
EAENIAYISRWLRAEREPSMYGDEVEGIPPTELYTESYCRKALESAKYVYELSLKLYNEIK

Sequences:

>Translated_141_residues
MNSKEIAEGYLREAKIRIKYAELSLNEDKDYAFCVRASQEIVELSIKAILRLLGIEYGKIHDPGKILVENMDRLPSWLKK
EAENIAYISRWLRAEREPSMYGDEVEGIPPTELYTESYCRKALESAKYVYELSLKLYNEIK
>Mature_141_residues
MNSKEIAEGYLREAKIRIKYAELSLNEDKDYAFCVRASQEIVELSIKAILRLLGIEYGKIHDPGKILVENMDRLPSWLKK
EAENIAYISRWLRAEREPSMYGDEVEGIPPTELYTESYCRKALESAKYVYELSLKLYNEIK

Specific function: Unknown

COG id: COG2250

COG function: function code S; Uncharacterized conserved protein related to C-terminal domain of eukaryotic chaperone, SACSIN

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16458; Mature: 16458

Theoretical pI: Translated: 5.12; Mature: 5.12

Prosite motif: PS50910 HEPN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNSKEIAEGYLREAKIRIKYAELSLNEDKDYAFCVRASQEIVELSIKAILRLLGIEYGKI
CCHHHHHHHHHHHHHHEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
HDPGKILVENMDRLPSWLKKEAENIAYISRWLRAEREPSMYGDEVEGIPPTELYTESYCR
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHH
KALESAKYVYELSLKLYNEIK
HHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MNSKEIAEGYLREAKIRIKYAELSLNEDKDYAFCVRASQEIVELSIKAILRLLGIEYGKI
CCHHHHHHHHHHHHHHEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
HDPGKILVENMDRLPSWLKKEAENIAYISRWLRAEREPSMYGDEVEGIPPTELYTESYCR
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHH
KALESAKYVYELSLKLYNEIK
HHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA