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The map label for this gene is dpo2 [H]

Identifier: 15898292

GI number: 15898292

Start: 1317363

End: 1317629

Strand: Reverse

Name: dpo2 [H]

Synonym: SSO8124

Alternate gene names: 15898292

Gene position: 1317629-1317363 (Counterclockwise)

Preceding gene: 15898296

Following gene: 15898291

Centisome position: 44.03

GC content: 42.32

Gene sequence:

>267_bases
ATGGGAAGAACACAACCCTCATACACCATGGCGGTGAACAGAGAATTGGAAAAGCTGGAAAGAATTATAGAACGCTTACA
CTCTCCCATATTATCCCTTTTACTAGAAAGGGTTAAGGAAAAAGTAAGGTATACTCAAAGTGCATCATATGACGAACTGG
TTGATCCCTATAACCTAGTTTACTTTGCGCTAATTTGGGCTTTGGCGGAGGAATGCGAGAAATGGAGGAGTACGTACTTG
ACGCTTATCCAATCAAGGGAGGAGTGA

Upstream 100 bases:

>100_bases
TTTAAGATACTATCTTCCTAATATTTAACTACAAAAGTTAAAACCTACACTTTCAGTATTCTCTCTAAAGACTTAATTTA
CCAGAGGAGAGATGTAACAC

Downstream 100 bases:

>100_bases
AACTATTCCTAAGCAATTTCAAGGAGAAAACTATCAGAACAACCTTCCCAGTTTACACCATAACAGATAACCCAGATATA
GTACTACAGCACCCAGAGGT

Product: DNA polymerase II (DNA polymerase B2) amino-end (dpo2)

Products: NA

Alternate protein names: DNA polymerase B2; DNA polymerase II [H]

Number of amino acids: Translated: 88; Mature: 87

Protein sequence:

>88_residues
MGRTQPSYTMAVNRELEKLERIIERLHSPILSLLLERVKEKVRYTQSASYDELVDPYNLVYFALIWALAEECEKWRSTYL
TLIQSREE

Sequences:

>Translated_88_residues
MGRTQPSYTMAVNRELEKLERIIERLHSPILSLLLERVKEKVRYTQSASYDELVDPYNLVYFALIWALAEECEKWRSTYL
TLIQSREE
>Mature_87_residues
GRTQPSYTMAVNRELEKLERIIERLHSPILSLLLERVKEKVRYTQSASYDELVDPYNLVYFALIWALAEECEKWRSTYLT
LIQSREE

Specific function: This polymerase is devoid of exonuclease activity [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the DNA polymerase type-B family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006172
- InterPro:   IPR006134
- InterPro:   IPR023211 [H]

Pfam domain/function: PF00136 DNA_pol_B [H]

EC number: =2.7.7.7 [H]

Molecular weight: Translated: 10525; Mature: 10394

Theoretical pI: Translated: 5.18; Mature: 5.18

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGRTQPSYTMAVNRELEKLERIIERLHSPILSLLLERVKEKVRYTQSASYDELVDPYNLV
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCHHHHH
YFALIWALAEECEKWRSTYLTLIQSREE
HHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
GRTQPSYTMAVNRELEKLERIIERLHSPILSLLLERVKEKVRYTQSASYDELVDPYNLV
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCHHHHH
YFALIWALAEECEKWRSTYLTLIQSREE
HHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8332474; 11427726 [H]