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The map label for this gene is 15898279

Identifier: 15898279

GI number: 15898279

Start: 1293799

End: 1294521

Strand: Reverse

Name: 15898279

Synonym: SSO1441

Alternate gene names: NA

Gene position: 1294521-1293799 (Counterclockwise)

Preceding gene: 15898280

Following gene: 15898278

Centisome position: 43.26

GC content: 41.22

Gene sequence:

>723_bases
TTGATCTACTCTAAGGTTTTTTTAAAACTTCATTGGGGGTTTTCCGTAGTTAAGCCTTTAGCTGCTAAGGCGAAGCCAGG
TTTCTATTTACCGCCTCCTACTACGCTGATTGGAGCCTTATCTTACGGTAAATTTAGGGGAGTGGATAATATTAATTTAG
GTAATGTTTACGGTAGTCCTGCATATAATTTTAGGAATATTATGGCTACTGCTAGATTGGAGTCTGAGGGAGTTTACACT
GAGGACATTATTAGGAACGTTATATCATATTTTCAACGTAAAGAGAGGAGGGAGAATCCGAGATATATTTACGGGGTGAT
CCCCACTGGTAAAGTATATATACCCAACGGTCGGTTAGTTGTGGTTTACGTAACTGATTCCATCAGTAAGGAGGAGTTGG
AGAAACTCTGCTGGAGTATAACTAGGATAGGATGTAAGGAGTGTTTAGCAAGTGTGGAGAACGTTGAAGTCGGTGAGGCT
AAAAAGGTTTCGGGTAGGGTAAAAACTAGATACTATTTCAGAGATACAGTGAAGGTAGTAGGTAGGAAGGAGTTTTTGGA
ATACGTTACTTTCTGGGAAGAGAATGGGTATATATGGGGGAAGGAAGGGTCACCGGTAAGGTACATTTTACCGATAACTA
CTTATCCCTTAGCTAGTAAGGAGGTTGAAGTTGAGGCTAAGGAAGCCTATGAGGTCGGCGGGGAATATGTCGTCTTTAGT
TGA

Upstream 100 bases:

>100_bases
TAACAACGAGGGGATAGAAGTGGGTGAAGGGGTTACAGTACTGTCAACTGTTGAGGACTTAGTAGTTAAATTAGAGGAAG
AGTAGAGAGGTAAGGTAGTT

Downstream 100 bases:

>100_bases
CTTCTATAACGATTTCATAACTCGTCATGGCTTTGAGGAAAGGAAGGGTATTGAGGAGACTTTACGATATTTGGAGAACG
GACATAATGTTATACTTAAG

Product: hypothetical protein

Products: NA

Alternate protein names: CRISPR-Associated Family

Number of amino acids: Translated: 240; Mature: 240

Protein sequence:

>240_residues
MIYSKVFLKLHWGFSVVKPLAAKAKPGFYLPPPTTLIGALSYGKFRGVDNINLGNVYGSPAYNFRNIMATARLESEGVYT
EDIIRNVISYFQRKERRENPRYIYGVIPTGKVYIPNGRLVVVYVTDSISKEELEKLCWSITRIGCKECLASVENVEVGEA
KKVSGRVKTRYYFRDTVKVVGRKEFLEYVTFWEENGYIWGKEGSPVRYILPITTYPLASKEVEVEAKEAYEVGGEYVVFS

Sequences:

>Translated_240_residues
MIYSKVFLKLHWGFSVVKPLAAKAKPGFYLPPPTTLIGALSYGKFRGVDNINLGNVYGSPAYNFRNIMATARLESEGVYT
EDIIRNVISYFQRKERRENPRYIYGVIPTGKVYIPNGRLVVVYVTDSISKEELEKLCWSITRIGCKECLASVENVEVGEA
KKVSGRVKTRYYFRDTVKVVGRKEFLEYVTFWEENGYIWGKEGSPVRYILPITTYPLASKEVEVEAKEAYEVGGEYVVFS
>Mature_240_residues
MIYSKVFLKLHWGFSVVKPLAAKAKPGFYLPPPTTLIGALSYGKFRGVDNINLGNVYGSPAYNFRNIMATARLESEGVYT
EDIIRNVISYFQRKERRENPRYIYGVIPTGKVYIPNGRLVVVYVTDSISKEELEKLCWSITRIGCKECLASVENVEVGEA
KKVSGRVKTRYYFRDTVKVVGRKEFLEYVTFWEENGYIWGKEGSPVRYILPITTYPLASKEVEVEAKEAYEVGGEYVVFS

Specific function: Unknown

COG id: COG1688

COG function: function code L; Uncharacterized protein predicted to be involved in DNA repair (RAMP superfamily)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 27397; Mature: 27397

Theoretical pI: Translated: 9.35; Mature: 9.35

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIYSKVFLKLHWGFSVVKPLAAKAKPGFYLPPPTTLIGALSYGKFRGVDNINLGNVYGSP
CCCCEEEEEEECCHHHHHHHHHCCCCCEECCCCHHHHHHHCCCCCCCCCCCEECCCCCCC
AYNFRNIMATARLESEGVYTEDIIRNVISYFQRKERRENPRYIYGVIPTGKVYIPNGRLV
CCHHHHHHEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCEEEECCCCEE
VVYVTDSISKEELEKLCWSITRIGCKECLASVENVEVGEAKKVSGRVKTRYYFRDTVKVV
EEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHCCCCEEEEEEEHHHHHHH
GRKEFLEYVTFWEENGYIWGKEGSPVRYILPITTYPLASKEVEVEAKEAYEVGGEYVVFS
HHHHHHHHHHEECCCCEEECCCCCCEEEEEEEEECCCCCCEEEEEHHHHHHCCCCEEEEC
>Mature Secondary Structure
MIYSKVFLKLHWGFSVVKPLAAKAKPGFYLPPPTTLIGALSYGKFRGVDNINLGNVYGSP
CCCCEEEEEEECCHHHHHHHHHCCCCCEECCCCHHHHHHHCCCCCCCCCCCEECCCCCCC
AYNFRNIMATARLESEGVYTEDIIRNVISYFQRKERRENPRYIYGVIPTGKVYIPNGRLV
CCHHHHHHEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCEEEECCCCEE
VVYVTDSISKEELEKLCWSITRIGCKECLASVENVEVGEAKKVSGRVKTRYYFRDTVKVV
EEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHCCCCEEEEEEEHHHHHHH
GRKEFLEYVTFWEENGYIWGKEGSPVRYILPITTYPLASKEVEVEAKEAYEVGGEYVVFS
HHHHHHHHHHEECCCCEEECCCCCCEEEEEEEEECCCCCCEEEEEHHHHHHCCCCEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA