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The map label for this gene is 15898265

Identifier: 15898265

GI number: 15898265

Start: 1279025

End: 1279870

Strand: Direct

Name: 15898265

Synonym: SSO1426

Alternate gene names: NA

Gene position: 1279025-1279870 (Clockwise)

Preceding gene: 15898264

Following gene: 15898266

Centisome position: 42.74

GC content: 37.71

Gene sequence:

>846_bases
TTGGTACTAATGGTTAACTATACATTTATTGATAAGAGAGTGATAAAGAGGACTACTATGATTGAGGGAGATGTGGAAAC
GGTATCTCCATTAAAGATTGGTGGGGGAAAGGATAATTTCGATCCATCTTCCCTGGCTAAAGATTCCATCCTAAAGGATG
TTGAAGGTAGACCGATAATTCCAGGATCATCATGGAAGGGGATATTTAGATCTACTGGTGAAAGAATTTTAAGGTTAAGA
AATATAGAAGTTTGTAGCGGTATAGGAAAGGATTACTGTTTGAATAATAATCGAAAAGAAAGGGACTTCAATAGTGCGTT
GAAGGAAAACGTTGATCAAGCATTAGAGATATTTTGGGATTATACTTGTTTGAACTGTAAAGTTTTCGGAACGATGAGTG
TTATAGGTGCTGTGAGATTTCTAGATTCACTTCCCATTAGTTACTCATTGAACACTAGATCGATGATAGCGATAAGTAGG
ACGGAGGGAGCTGTAGCTAGGAGGGCCTTAGTAACTGTTGAATACGTTGATGTAGGGTCTAAATTTAGTTTTAAGATGAT
GGGGTACAATTTGCCTAATTACGCTATTGGTTACTTAATTACGATAATGAAGAATATTCATGATGGCTTTACACAAGTCG
GAGGGCATAAGAGTAGGGGGTTCGGTTTTGTGAAGTTCGGTAAGGTTAAGTTTACCGATCTTGGAGAAAAGAGGATTGGT
GATGAGGATATTCAAGTTAAGGATGTAGGTGATTTAGTGGAAGGAAATGGAGATGAGTTTTTCGGGAGAATGAAACCTTT
TATGGAGGCTTTCAATAATGCAAAGATCCCCTATCCGAAGAAGTAA

Upstream 100 bases:

>100_bases
GGTTATGGTTTAATTAAGTTAGTTGACGCTAAGGTGAGTTTATATAAGGCACCAGATCACCTAGTTTCTCCAGTTATTGT
GAAGAAATTGGAAGAGGTGA

Downstream 100 bases:

>100_bases
CTATACTCCTAGAAATGAAAAGGGATTAGAAGGGGTTATAGAGTTACAGCTAAATGTAGTTTCCGATTACTTACACGTAG
GTTCTGGGAAGTATGATGTG

Product: hypothetical protein

Products: NA

Alternate protein names: CRISPR-Associated Csm3 Family Protein; CRISPR-Associated Csx7 Family Protein; Crispr-Associated Ramp Protein

Number of amino acids: Translated: 281; Mature: 281

Protein sequence:

>281_residues
MVLMVNYTFIDKRVIKRTTMIEGDVETVSPLKIGGGKDNFDPSSLAKDSILKDVEGRPIIPGSSWKGIFRSTGERILRLR
NIEVCSGIGKDYCLNNNRKERDFNSALKENVDQALEIFWDYTCLNCKVFGTMSVIGAVRFLDSLPISYSLNTRSMIAISR
TEGAVARRALVTVEYVDVGSKFSFKMMGYNLPNYAIGYLITIMKNIHDGFTQVGGHKSRGFGFVKFGKVKFTDLGEKRIG
DEDIQVKDVGDLVEGNGDEFFGRMKPFMEAFNNAKIPYPKK

Sequences:

>Translated_281_residues
MVLMVNYTFIDKRVIKRTTMIEGDVETVSPLKIGGGKDNFDPSSLAKDSILKDVEGRPIIPGSSWKGIFRSTGERILRLR
NIEVCSGIGKDYCLNNNRKERDFNSALKENVDQALEIFWDYTCLNCKVFGTMSVIGAVRFLDSLPISYSLNTRSMIAISR
TEGAVARRALVTVEYVDVGSKFSFKMMGYNLPNYAIGYLITIMKNIHDGFTQVGGHKSRGFGFVKFGKVKFTDLGEKRIG
DEDIQVKDVGDLVEGNGDEFFGRMKPFMEAFNNAKIPYPKK
>Mature_281_residues
MVLMVNYTFIDKRVIKRTTMIEGDVETVSPLKIGGGKDNFDPSSLAKDSILKDVEGRPIIPGSSWKGIFRSTGERILRLR
NIEVCSGIGKDYCLNNNRKERDFNSALKENVDQALEIFWDYTCLNCKVFGTMSVIGAVRFLDSLPISYSLNTRSMIAISR
TEGAVARRALVTVEYVDVGSKFSFKMMGYNLPNYAIGYLITIMKNIHDGFTQVGGHKSRGFGFVKFGKVKFTDLGEKRIG
DEDIQVKDVGDLVEGNGDEFFGRMKPFMEAFNNAKIPYPKK

Specific function: Unknown

COG id: COG1337

COG function: function code L; Uncharacterized protein predicted to be involved in DNA repair (RAMP superfamily)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 31528; Mature: 31528

Theoretical pI: Translated: 9.43; Mature: 9.43

Prosite motif: PS00327 BACTERIAL_OPSIN_RET

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVLMVNYTFIDKRVIKRTTMIEGDVETVSPLKIGGGKDNFDPSSLAKDSILKDVEGRPII
CEEEEEEHHHHHHHHHHHHHCCCCCCCCCCEEECCCCCCCCHHHHHHHHHHHHCCCCCCC
PGSSWKGIFRSTGERILRLRNIEVCSGIGKDYCLNNNRKERDFNSALKENVDQALEIFWD
CCCCCCHHHHHHHHHHHHHHCHHHHHCCCCCHHCCCCCCCHHHHHHHHHHHHHHHHHHHH
YTCLNCKVFGTMSVIGAVRFLDSLPISYSLNTRSMIAISRTEGAVARRALVTVEYVDVGS
HEEEEEEEEHHHHHHHHHHHHHCCCCEEECCCCEEEEEECCCCHHHHHHEEEEEEEECCC
KFSFKMMGYNLPNYAIGYLITIMKNIHDGFTQVGGHKSRGFGFVKFGKVKFTDLGEKRIG
CEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCEEEECCCCHHCC
DEDIQVKDVGDLVEGNGDEFFGRMKPFMEAFNNAKIPYPKK
CCCEEEEECHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCC
>Mature Secondary Structure
MVLMVNYTFIDKRVIKRTTMIEGDVETVSPLKIGGGKDNFDPSSLAKDSILKDVEGRPII
CEEEEEEHHHHHHHHHHHHHCCCCCCCCCCEEECCCCCCCCHHHHHHHHHHHHCCCCCCC
PGSSWKGIFRSTGERILRLRNIEVCSGIGKDYCLNNNRKERDFNSALKENVDQALEIFWD
CCCCCCHHHHHHHHHHHHHHCHHHHHCCCCCHHCCCCCCCHHHHHHHHHHHHHHHHHHHH
YTCLNCKVFGTMSVIGAVRFLDSLPISYSLNTRSMIAISRTEGAVARRALVTVEYVDVGS
HEEEEEEEEHHHHHHHHHHHHHCCCCEEECCCCEEEEEECCCCHHHHHHEEEEEEEECCC
KFSFKMMGYNLPNYAIGYLITIMKNIHDGFTQVGGHKSRGFGFVKFGKVKFTDLGEKRIG
CEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCEEEECCCCHHCC
DEDIQVKDVGDLVEGNGDEFFGRMKPFMEAFNNAKIPYPKK
CCCEEEEECHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA