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The map label for this gene is 15898264

Identifier: 15898264

GI number: 15898264

Start: 1278289

End: 1279041

Strand: Direct

Name: 15898264

Synonym: SSO1425

Alternate gene names: NA

Gene position: 1278289-1279041 (Clockwise)

Preceding gene: 15898263

Following gene: 15898265

Centisome position: 42.72

GC content: 38.78

Gene sequence:

>753_bases
GTGAAAATGTCTTGTATGGATCTTGATGTTATAACGACTGTTGTGAAAATTGAGGGTAAGTTGCGTAATGAAACTCTCTT
AAGAGTAGGTAAGGGTAAGACTCAAGATTTCGCTGAGGCTACTGATAATCCAATAATTAAATATAGGGATAGACCTTTAA
TACCCGGTTCTAGTTTGAAGGGGGCATTCAGGAGTTTAGTAGAGTCCTACACCAAGTCATTAAACGACAGTAAATATTAC
GTGTGTGATTTGGACGATAATAGTTGCGTTAGCTGTGAGGAGAAAAAGAAGGATAATGGGATTGTAGAGGGGAGATATTG
TATTCCTTGTATATTATTTGGCTTTAAGGATTTGGCTTCCAGGGTTTATATTTTAGACGCTATTGCTGAGAAGTACTCAA
TTTCCCAGAGAACGATGGTTGCGATTAATAGGGTTTTCGGCGGACAAATGCCTGGCCATTTGTATACTTTGGATTACGTA
GACCCTGGTAGTGAATTTAGTTTTATGATGATGATTTATAATCTTAACTTGATCGAGGGGGAGAAGGATTGGAAGGCGAA
GTCTGTTGAAGCCTTGAAGTTCCTTTTAGCGACACTGGTTAGAGAGGGGATTTTCGTAGGAGCTAGGAAGAGTGTTGGTT
ATGGTTTAATTAAGTTAGTTGACGCTAAGGTGAGTTTATATAAGGCACCAGATCACCTAGTTTCTCCAGTTATTGTGAAG
AAATTGGAAGAGGTGATTGGTACTAATGGTTAA

Upstream 100 bases:

>100_bases
TGAAGTGGGTTTACGATACTTTAACGGGGTTAAAAGTTAATTACAATAATGTGAAGGGTGTTAAGACCTTCAAGGAGCTT
GTTAACATTTTGAGTAAGGT

Downstream 100 bases:

>100_bases
CTATACATTTATTGATAAGAGAGTGATAAAGAGGACTACTATGATTGAGGGAGATGTGGAAACGGTATCTCCATTAAAGA
TTGGTGGGGGAAAGGATAAT

Product: hypothetical protein

Products: NA

Alternate protein names: CRISPR-Associated Csx7 Family Protein; CRISPR-Associated Csm3 Family Protein

Number of amino acids: Translated: 250; Mature: 250

Protein sequence:

>250_residues
MKMSCMDLDVITTVVKIEGKLRNETLLRVGKGKTQDFAEATDNPIIKYRDRPLIPGSSLKGAFRSLVESYTKSLNDSKYY
VCDLDDNSCVSCEEKKKDNGIVEGRYCIPCILFGFKDLASRVYILDAIAEKYSISQRTMVAINRVFGGQMPGHLYTLDYV
DPGSEFSFMMMIYNLNLIEGEKDWKAKSVEALKFLLATLVREGIFVGARKSVGYGLIKLVDAKVSLYKAPDHLVSPVIVK
KLEEVIGTNG

Sequences:

>Translated_250_residues
MKMSCMDLDVITTVVKIEGKLRNETLLRVGKGKTQDFAEATDNPIIKYRDRPLIPGSSLKGAFRSLVESYTKSLNDSKYY
VCDLDDNSCVSCEEKKKDNGIVEGRYCIPCILFGFKDLASRVYILDAIAEKYSISQRTMVAINRVFGGQMPGHLYTLDYV
DPGSEFSFMMMIYNLNLIEGEKDWKAKSVEALKFLLATLVREGIFVGARKSVGYGLIKLVDAKVSLYKAPDHLVSPVIVK
KLEEVIGTNG
>Mature_250_residues
MKMSCMDLDVITTVVKIEGKLRNETLLRVGKGKTQDFAEATDNPIIKYRDRPLIPGSSLKGAFRSLVESYTKSLNDSKYY
VCDLDDNSCVSCEEKKKDNGIVEGRYCIPCILFGFKDLASRVYILDAIAEKYSISQRTMVAINRVFGGQMPGHLYTLDYV
DPGSEFSFMMMIYNLNLIEGEKDWKAKSVEALKFLLATLVREGIFVGARKSVGYGLIKLVDAKVSLYKAPDHLVSPVIVK
KLEEVIGTNG

Specific function: Unknown

COG id: COG1337

COG function: function code L; Uncharacterized protein predicted to be involved in DNA repair (RAMP superfamily)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 27939; Mature: 27939

Theoretical pI: Translated: 8.33; Mature: 8.33

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
5.6 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
5.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKMSCMDLDVITTVVKIEGKLRNETLLRVGKGKTQDFAEATDNPIIKYRDRPLIPGSSLK
CCCCCHHHHHHHHHHHHCCCCCCCHHEEECCCCCHHHHHHCCCCEEEECCCCCCCCCCHH
GAFRSLVESYTKSLNDSKYYVCDLDDNSCVSCEEKKKDNGIVEGRYCIPCILFGFKDLAS
HHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCHHHHCCCCEECCCHHHHHHHHHHHHHHH
RVYILDAIAEKYSISQRTMVAINRVFGGQMPGHLYTLDYVDPGSEFSFMMMIYNLNLIEG
HHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCEEEEEEEECEEEEC
EKDWKAKSVEALKFLLATLVREGIFVGARKSVGYGLIKLVDAKVSLYKAPDHLVSPVIVK
CCCCCHHHHHHHHHHHHHHHHCCEEEECCCCCCHHHHHHHHHHHHEEECCHHHHHHHHHH
KLEEVIGTNG
HHHHHHCCCC
>Mature Secondary Structure
MKMSCMDLDVITTVVKIEGKLRNETLLRVGKGKTQDFAEATDNPIIKYRDRPLIPGSSLK
CCCCCHHHHHHHHHHHHCCCCCCCHHEEECCCCCHHHHHHCCCCEEEECCCCCCCCCCHH
GAFRSLVESYTKSLNDSKYYVCDLDDNSCVSCEEKKKDNGIVEGRYCIPCILFGFKDLAS
HHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCHHHHCCCCEECCCHHHHHHHHHHHHHHH
RVYILDAIAEKYSISQRTMVAINRVFGGQMPGHLYTLDYVDPGSEFSFMMMIYNLNLIEG
HHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCEEEEEEEECEEEEC
EKDWKAKSVEALKFLLATLVREGIFVGARKSVGYGLIKLVDAKVSLYKAPDHLVSPVIVK
CCCCCHHHHHHHHHHHHHHHHCCEEEECCCCCCHHHHHHHHHHHHEEECCHHHHHHHHHH
KLEEVIGTNG
HHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA