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The map label for this gene is 15898232

Identifier: 15898232

GI number: 15898232

Start: 1240458

End: 1241333

Strand: Direct

Name: 15898232

Synonym: SSO1391

Alternate gene names: NA

Gene position: 1240458-1241333 (Clockwise)

Preceding gene: 15898230

Following gene: 15898233

Centisome position: 41.46

GC content: 42.47

Gene sequence:

>876_bases
GTGTTCTTTACTCATTCAGATATGCTGTTGCTTTCAAAGAGGATAAAGAAGTTACCTAAGAACGTGGATGAGGAGCTGAG
GGGATGGAATTGGAGCGAACCACCAGTTTACACTAGGTCCCTTTCACAGGTATCAATTTCCGAAATGGTTTACTGTAGTA
CTCTGAGGAACGTTTACCTTAAGGTAAAGGGCTTTAGGGGAGAAATAGGTAGGCAAATACTTCAAGGTTCACTTATCCAC
ACGATTTACGCTATTGGCATTGAAGCAATCAAACGTTTTATTTATTCAAGGGAAAGCATTGATGGGAGTACTCTGAGAAC
GCTAATGGGAGATGAGTTTTACTCCCTACTTAAGGACTTAAGGGAGGAAGAGGGGATTTACGCAAAGGTCTTATGGGATC
ACATTACGAACATTTATTCAGCTGAACTGGATAGGGTTAGGAGTAAGTTCACTAACTTAACTAGGGATTCCTTGGTCTCC
CAAGTTGTGCCGTTTTACGTTGAGTTTCCAGTTGATGGTTCCCTTCTGGGCTTGACCAATTTAAGGGTCGACGCCTTTAT
CCCTCACCTTCCCCTAATAGCGGAAATGAAGACTGGGAAATACAGATACACTCACGAGTTGTCCCTTGCAGGATACGCTT
TGGCAATTGAGAGCCAGTACGAGATACCCATTGATTTTGGTTACTTGTGTTATGTTACTGTGACTGAAAAGGAGGTTAAG
AATAACTGCAAGCTGATTCCCATTTCAGATTCCTTGAGGAGTGAGTTCTTGGACATGAGGGATAAGGCTCAAGACATAAT
GGATAAGGGTGTGGATCCTGGGATAGCTAAGGATTGTGAGAGTGATTGCATGTTTTATAAGGTTTGTCACCCTTAA

Upstream 100 bases:

>100_bases
AGTGAGGATATGGAAACAATATGTTTCCTTTTTGGCTACGTTACGATGAGAGTTACTTGAGATAAAAGAGTTATTAGTTT
GCATTGTCTATCTATATAAT

Downstream 100 bases:

>100_bases
TGTATTAATGACAATAAGTGGGATTACGATAAAGCACTTCGCCTATTGTCCTCAAATAGTTAGGATAGAGAGCATGGGGT
TCACTGAGAGAGTGAGCGAG

Product: hypothetical protein

Products: NA

Alternate protein names: CRISPR-Associated Protein Csa1 Family; Csa1 Family CRISPR-Associated Protein; Crispr-Associated Protein

Number of amino acids: Translated: 291; Mature: 291

Protein sequence:

>291_residues
MFFTHSDMLLLSKRIKKLPKNVDEELRGWNWSEPPVYTRSLSQVSISEMVYCSTLRNVYLKVKGFRGEIGRQILQGSLIH
TIYAIGIEAIKRFIYSRESIDGSTLRTLMGDEFYSLLKDLREEEGIYAKVLWDHITNIYSAELDRVRSKFTNLTRDSLVS
QVVPFYVEFPVDGSLLGLTNLRVDAFIPHLPLIAEMKTGKYRYTHELSLAGYALAIESQYEIPIDFGYLCYVTVTEKEVK
NNCKLIPISDSLRSEFLDMRDKAQDIMDKGVDPGIAKDCESDCMFYKVCHP

Sequences:

>Translated_291_residues
MFFTHSDMLLLSKRIKKLPKNVDEELRGWNWSEPPVYTRSLSQVSISEMVYCSTLRNVYLKVKGFRGEIGRQILQGSLIH
TIYAIGIEAIKRFIYSRESIDGSTLRTLMGDEFYSLLKDLREEEGIYAKVLWDHITNIYSAELDRVRSKFTNLTRDSLVS
QVVPFYVEFPVDGSLLGLTNLRVDAFIPHLPLIAEMKTGKYRYTHELSLAGYALAIESQYEIPIDFGYLCYVTVTEKEVK
NNCKLIPISDSLRSEFLDMRDKAQDIMDKGVDPGIAKDCESDCMFYKVCHP
>Mature_291_residues
MFFTHSDMLLLSKRIKKLPKNVDEELRGWNWSEPPVYTRSLSQVSISEMVYCSTLRNVYLKVKGFRGEIGRQILQGSLIH
TIYAIGIEAIKRFIYSRESIDGSTLRTLMGDEFYSLLKDLREEEGIYAKVLWDHITNIYSAELDRVRSKFTNLTRDSLVS
QVVPFYVEFPVDGSLLGLTNLRVDAFIPHLPLIAEMKTGKYRYTHELSLAGYALAIESQYEIPIDFGYLCYVTVTEKEVK
NNCKLIPISDSLRSEFLDMRDKAQDIMDKGVDPGIAKDCESDCMFYKVCHP

Specific function: Unknown

COG id: COG4343

COG function: function code S; Uncharacterized protein conserved in archaea

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 33491; Mature: 33491

Theoretical pI: Translated: 6.26; Mature: 6.26

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFFTHSDMLLLSKRIKKLPKNVDEELRGWNWSEPPVYTRSLSQVSISEMVYCSTLRNVYL
CCCCCHHHHHHHHHHHHHHCCHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHE
KVKGFRGEIGRQILQGSLIHTIYAIGIEAIKRFIYSRESIDGSTLRTLMGDEFYSLLKDL
EEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH
REEEGIYAKVLWDHITNIYSAELDRVRSKFTNLTRDSLVSQVVPFYVEFPVDGSLLGLTN
HHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCCCCEEEEEC
LRVDAFIPHLPLIAEMKTGKYRYTHELSLAGYALAIESQYEIPIDFGYLCYVTVTEKEVK
CCHHHHCCCCCHHEECCCCCEEEEEEEEECEEEEEECCCCCCCCCCCEEEEEEEEHHHHH
NNCKLIPISDSLRSEFLDMRDKAQDIMDKGVDPGIAKDCESDCMFYKVCHP
CCCEEEECCHHHHHHHHHHHHHHHHHHHCCCCCCCHHCCCCCCEEEEECCC
>Mature Secondary Structure
MFFTHSDMLLLSKRIKKLPKNVDEELRGWNWSEPPVYTRSLSQVSISEMVYCSTLRNVYL
CCCCCHHHHHHHHHHHHHHCCHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHE
KVKGFRGEIGRQILQGSLIHTIYAIGIEAIKRFIYSRESIDGSTLRTLMGDEFYSLLKDL
EEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH
REEEGIYAKVLWDHITNIYSAELDRVRSKFTNLTRDSLVSQVVPFYVEFPVDGSLLGLTN
HHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCCCCEEEEEC
LRVDAFIPHLPLIAEMKTGKYRYTHELSLAGYALAIESQYEIPIDFGYLCYVTVTEKEVK
CCHHHHCCCCCHHEECCCCCEEEEEEEEECEEEEEECCCCCCCCCCCEEEEEEEEHHHHH
NNCKLIPISDSLRSEFLDMRDKAQDIMDKGVDPGIAKDCESDCMFYKVCHP
CCCEEEECCHHHHHHHHHHHHHHHHHHHCCCCCCCHHCCCCCCEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA