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The map label for this gene is 15898226

Identifier: 15898226

GI number: 15898226

Start: 1226887

End: 1227144

Strand: Reverse

Name: 15898226

Synonym: SSO7893

Alternate gene names: NA

Gene position: 1227144-1226887 (Counterclockwise)

Preceding gene: 15898227

Following gene: 15898225

Centisome position: 41.01

GC content: 37.6

Gene sequence:

>258_bases
ATGGAGGCCCCAGTCGCCGGAATAGATGTTTCAAAAGATAAATTAGTAGTGTACTTCCAAGGTAAATACTATGAATTTCA
AAATAATAAGCAAGGTTTTGAAGGAGTAAAGCAAGTCTTGCCAAAGGGTTGCAAAGTTGCTATAGAAAGTACGGGAGTTT
ACCACATCAACTTGGCTAAGTACTTGGGTAAAGAGTACGACGTTAGTGCTTTCAGAAAGTTTATAGCTTTAGGCAAAGGA
TATATCACTAGATCATAG

Upstream 100 bases:

>100_bases
AGGCCGTTGATCTCCTTGGGCTTAGAGCTCGAGAGGGAGCTTGGCCTCCTCCAATTCGGACCGGAAGTTGGGCTTGAAGC
CCGAATAAGGGTGAGTATAC

Downstream 100 bases:

>100_bases
TCTAAGAACTTTTCCAAAATACTAGTGAGGATTATTAATCCCCTCGTACTCAAGAAGTTCAAGGACATTAGGGGTAAGAA
GAGTGATAAGAATGATAAAA

Product: transposon ISC1190 Orf1

Products: NA

Alternate protein names: Partial Transposase In ISC; Transposase Fragment In ISC; Transposon ISC; ORF1 In Transposon ISC; Transposon

Number of amino acids: Translated: 85; Mature: 85

Protein sequence:

>85_residues
MEAPVAGIDVSKDKLVVYFQGKYYEFQNNKQGFEGVKQVLPKGCKVAIESTGVYHINLAKYLGKEYDVSAFRKFIALGKG
YITRS

Sequences:

>Translated_85_residues
MEAPVAGIDVSKDKLVVYFQGKYYEFQNNKQGFEGVKQVLPKGCKVAIESTGVYHINLAKYLGKEYDVSAFRKFIALGKG
YITRS
>Mature_85_residues
MEAPVAGIDVSKDKLVVYFQGKYYEFQNNKQGFEGVKQVLPKGCKVAIESTGVYHINLAKYLGKEYDVSAFRKFIALGKG
YITRS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 9544; Mature: 9544

Theoretical pI: Translated: 9.76; Mature: 9.76

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEAPVAGIDVSKDKLVVYFQGKYYEFQNNKQGFEGVKQVLPKGCKVAIESTGVYHINLAK
CCCCCCCCCCCCCEEEEEECCEEEEECCCCCHHHHHHHHCCCCCEEEEECCCEEEEEHHH
YLGKEYDVSAFRKFIALGKGYITRS
HCCCCCCHHHHHHHHHHCCCEEECC
>Mature Secondary Structure
MEAPVAGIDVSKDKLVVYFQGKYYEFQNNKQGFEGVKQVLPKGCKVAIESTGVYHINLAK
CCCCCCCCCCCCCEEEEEECCEEEEECCCCCHHHHHHHHCCCCCEEEEECCCEEEEEHHH
YLGKEYDVSAFRKFIALGKGYITRS
HCCCCCCHHHHHHHHHHCCCEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA