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The map label for this gene is 15898223

Identifier: 15898223

GI number: 15898223

Start: 1224793

End: 1225251

Strand: Direct

Name: 15898223

Synonym: SSO1384

Alternate gene names: NA

Gene position: 1224793-1225251 (Clockwise)

Preceding gene: 15898222

Following gene: 15898224

Centisome position: 40.93

GC content: 44.66

Gene sequence:

>459_bases
ATGCCGAAATCCAGAATGCACGGTATAAGGCTCGACAAGAAACAAGAGGAAGAGAGGAGGATTAACGCTGTAAAAGATGT
GAGGAACGGGATGAGTATAAAGGACGTTGCCAAGAAGTATGACGTCTCCATCTTTACCGTGTACAAGTGGTTGAGGAAAG
GTGACCTGAGCGCTAAGCCGAGGAAGGGACCCACGAAACTGAAGGACGAGGAAAAGCTCGTCCGAATCTTAGAAAAGAGC
CCAAGAGATTTCGGCTTGAACTACGATTTCTGGACCTTGAAGCTCATAGCGTATATACTTGACAAGGAATTTGGGATAAA
GTACAACCCGAGGAGTTTAAGCCCAGTCCTCAAGAAGTTAGGCTTCAAGTACAAGAAAGGAAAGAGAACTTACGTTAGAG
ACGATAACGCTGTAGAAAGGTGGGTGAAGGAACAAGGGGAGAAGCTTTTAAAAAAATAA

Upstream 100 bases:

>100_bases
AATCTTTCCCGGTTAGATGAGAAATGTTTATTGATAAGCTATATACTTCGTCAGACTTTAAAGAGCAAGATTTATATTTC
ATGAGTAATACTAAATTGTT

Downstream 100 bases:

>100_bases
GAGAAGGGTACAAGGTACACATCTTCGATGAGTCGTACGTGTCCTACATAAACAAGGGTAAAGGCTGGATGAAGGTCGGA
GGAGGGATAAAGGTCAACCC

Product: transposon ISC1078 Orf1

Products: NA

Alternate protein names: Transposase ISC

Number of amino acids: Translated: 152; Mature: 151

Protein sequence:

>152_residues
MPKSRMHGIRLDKKQEEERRINAVKDVRNGMSIKDVAKKYDVSIFTVYKWLRKGDLSAKPRKGPTKLKDEEKLVRILEKS
PRDFGLNYDFWTLKLIAYILDKEFGIKYNPRSLSPVLKKLGFKYKKGKRTYVRDDNAVERWVKEQGEKLLKK

Sequences:

>Translated_152_residues
MPKSRMHGIRLDKKQEEERRINAVKDVRNGMSIKDVAKKYDVSIFTVYKWLRKGDLSAKPRKGPTKLKDEEKLVRILEKS
PRDFGLNYDFWTLKLIAYILDKEFGIKYNPRSLSPVLKKLGFKYKKGKRTYVRDDNAVERWVKEQGEKLLKK
>Mature_151_residues
PKSRMHGIRLDKKQEEERRINAVKDVRNGMSIKDVAKKYDVSIFTVYKWLRKGDLSAKPRKGPTKLKDEEKLVRILEKSP
RDFGLNYDFWTLKLIAYILDKEFGIKYNPRSLSPVLKKLGFKYKKGKRTYVRDDNAVERWVKEQGEKLLKK

Specific function: Unknown

COG id: COG3415

COG function: function code L; Transposase and inactivated derivatives

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18048; Mature: 17917

Theoretical pI: Translated: 10.74; Mature: 10.74

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPKSRMHGIRLDKKQEEERRINAVKDVRNGMSIKDVAKKYDVSIFTVYKWLRKGDLSAKP
CCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHCCHHHHHHHHHHHCCCCCCC
RKGPTKLKDEEKLVRILEKSPRDFGLNYDFWTLKLIAYILDKEFGIKYNPRSLSPVLKKL
CCCCCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHH
GFKYKKGKRTYVRDDNAVERWVKEQGEKLLKK
CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
PKSRMHGIRLDKKQEEERRINAVKDVRNGMSIKDVAKKYDVSIFTVYKWLRKGDLSAKP
CCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHCCHHHHHHHHHHHCCCCCCC
RKGPTKLKDEEKLVRILEKSPRDFGLNYDFWTLKLIAYILDKEFGIKYNPRSLSPVLKKL
CCCCCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHH
GFKYKKGKRTYVRDDNAVERWVKEQGEKLLKK
CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA