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The map label for this gene is acd-1 [H]

Identifier: 15898009

GI number: 15898009

Start: 994637

End: 995728

Strand: Direct

Name: acd-1 [H]

Synonym: SSO1153

Alternate gene names: 15898009

Gene position: 994637-995728 (Clockwise)

Preceding gene: 15898008

Following gene: 15898010

Centisome position: 33.24

GC content: 39.84

Gene sequence:

>1092_bases
GTGAATGAGGAGGAGTATAGGTTAAAGTTAAGGGAATGGATAAGAAATAGCGCTCCGGAGTCATTAAAGGGAAGAAAAAT
CCTATTTGAGACGGTAGAATTTGATGATTATAATGAGTTAAGGTCTTGGCAAAGGAAATTGGCTGATGCCGGATATTTGG
GAATAACTTGGCCTAAGGAGTACGGTGGGCAAGGTTTAGATCCAATTTACGAAGTAATCGCTTATGAGGAGTTCATAAGG
GCAGGATTGCCATATGGTAGAAGTTTAGGGTCAATTGGTTTAATGGTAGTAGCTCCTGCCATTTTAAAGCATGGAAATGA
AGATCAGAAGAGGAGATATCTACCTAGAATACTAAGGGCCGAGGATATATGGTGTCAAGGTTTTTCTGAACCACAAGCTG
GCTCAGATTTGGCTTCTGTGACCACTAGGGCCGAGGATAAGGGTGATTACTTTTTAGTTAATGGACAAAAAATCTGGAGT
AGTTATGCCCATATTGCTGATTATATGATACTCTTAGCAAGAACTGGTGAGGATAAGTATAAGGGCTTAACGATGTTCAT
TCTTAACATGAAGCAGGAGGGAATTAGAGTATCCCCCATAAATCAATTAACGGGAAAGAGTGACTTTAACACGGTGTATT
TCAACAACGTAAAAGTTCCTAAAAATAACGTTATAGGTAACGTTGGTGATGGTTGGAAAGTCGCCATGACAGTTTTAAAT
CATGAGAGGTTCATGTTGGGAGTTACAATGTTATTTACGTCAAAGATAGCCTTGGAGAGTTTGAAGGGGGTAAAGGAGAA
AGAGGAGTTGGAAGATGAAGTTGAAGGTCTAGAGGCGTTTTATAGAAGGATTTTAATAAAGTTGAGGAAAGGAGAGGATA
TAGACGTGGAGGGATCGATGTTGAAGCTTTTGGCATCAGAGTTGCTCCAGAGGATATATGAGATCGCAGTGATGAATTAC
GATTTGGAAACCATAATGAAAGAGAAGTGGTATTTAGGTATGTTAGCTTCTAGGGGTAGAACAATAGCTGGGGGTACTTC
AGAGATTCTTAGAAACGTGGTAGGTGAGAGAGCTCTTAAACTTCCGAAATAA

Upstream 100 bases:

>100_bases
GTTAGGCTAAGTATAGCGTGATGAACCGTGTTTCAGCTGATCTGTGACGATAGCCCTTCGGCTGAGCAATTTTTTATTTT
ATAATTGCTAATTTTTACTT

Downstream 100 bases:

>100_bases
TTATATTGCGTTTCTCTTTTCTTATAATATGTTCTTCGATGATTTTCAAGTCGGTCAAAAGTGGGAGAGCAAGGGAAGGA
CTATAACTGATGCAGATGTT

Product: Acyl-CoA dehydrogenase (acd-1)

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 363; Mature: 363

Protein sequence:

>363_residues
MNEEEYRLKLREWIRNSAPESLKGRKILFETVEFDDYNELRSWQRKLADAGYLGITWPKEYGGQGLDPIYEVIAYEEFIR
AGLPYGRSLGSIGLMVVAPAILKHGNEDQKRRYLPRILRAEDIWCQGFSEPQAGSDLASVTTRAEDKGDYFLVNGQKIWS
SYAHIADYMILLARTGEDKYKGLTMFILNMKQEGIRVSPINQLTGKSDFNTVYFNNVKVPKNNVIGNVGDGWKVAMTVLN
HERFMLGVTMLFTSKIALESLKGVKEKEELEDEVEGLEAFYRRILIKLRKGEDIDVEGSMLKLLASELLQRIYEIAVMNY
DLETIMKEKWYLGMLASRGRTIAGGTSEILRNVVGERALKLPK

Sequences:

>Translated_363_residues
MNEEEYRLKLREWIRNSAPESLKGRKILFETVEFDDYNELRSWQRKLADAGYLGITWPKEYGGQGLDPIYEVIAYEEFIR
AGLPYGRSLGSIGLMVVAPAILKHGNEDQKRRYLPRILRAEDIWCQGFSEPQAGSDLASVTTRAEDKGDYFLVNGQKIWS
SYAHIADYMILLARTGEDKYKGLTMFILNMKQEGIRVSPINQLTGKSDFNTVYFNNVKVPKNNVIGNVGDGWKVAMTVLN
HERFMLGVTMLFTSKIALESLKGVKEKEELEDEVEGLEAFYRRILIKLRKGEDIDVEGSMLKLLASELLQRIYEIAVMNY
DLETIMKEKWYLGMLASRGRTIAGGTSEILRNVVGERALKLPK
>Mature_363_residues
MNEEEYRLKLREWIRNSAPESLKGRKILFETVEFDDYNELRSWQRKLADAGYLGITWPKEYGGQGLDPIYEVIAYEEFIR
AGLPYGRSLGSIGLMVVAPAILKHGNEDQKRRYLPRILRAEDIWCQGFSEPQAGSDLASVTTRAEDKGDYFLVNGQKIWS
SYAHIADYMILLARTGEDKYKGLTMFILNMKQEGIRVSPINQLTGKSDFNTVYFNNVKVPKNNVIGNVGDGWKVAMTVLN
HERFMLGVTMLFTSKIALESLKGVKEKEELEDEVEGLEAFYRRILIKLRKGEDIDVEGSMLKLLASELLQRIYEIAVMNY
DLETIMKEKWYLGMLASRGRTIAGGTSEILRNVVGERALKLPK

Specific function: Unknown

COG id: COG1960

COG function: function code I; Acyl-CoA dehydrogenases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the acyl-CoA dehydrogenase family [H]

Homologues:

Organism=Homo sapiens, GI226958412, Length=217, Percent_Identity=34.1013824884793, Blast_Score=125, Evalue=4e-29,
Organism=Homo sapiens, GI226958414, Length=222, Percent_Identity=34.6846846846847, Blast_Score=120, Evalue=2e-27,
Organism=Homo sapiens, GI21361497, Length=218, Percent_Identity=35.3211009174312, Blast_Score=113, Evalue=3e-25,
Organism=Homo sapiens, GI4501859, Length=214, Percent_Identity=34.1121495327103, Blast_Score=111, Evalue=9e-25,
Organism=Homo sapiens, GI76496475, Length=234, Percent_Identity=34.1880341880342, Blast_Score=109, Evalue=5e-24,
Organism=Homo sapiens, GI4557235, Length=234, Percent_Identity=34.1880341880342, Blast_Score=108, Evalue=6e-24,
Organism=Homo sapiens, GI4557233, Length=344, Percent_Identity=28.4883720930233, Blast_Score=108, Evalue=1e-23,
Organism=Homo sapiens, GI187960098, Length=226, Percent_Identity=30.9734513274336, Blast_Score=103, Evalue=3e-22,
Organism=Homo sapiens, GI4557231, Length=226, Percent_Identity=30.9734513274336, Blast_Score=103, Evalue=3e-22,
Organism=Homo sapiens, GI7656849, Length=209, Percent_Identity=28.7081339712919, Blast_Score=89, Evalue=9e-18,
Organism=Homo sapiens, GI4501857, Length=340, Percent_Identity=22.9411764705882, Blast_Score=88, Evalue=1e-17,
Organism=Homo sapiens, GI7669494, Length=225, Percent_Identity=27.1111111111111, Blast_Score=80, Evalue=2e-15,
Organism=Homo sapiens, GI4503943, Length=225, Percent_Identity=27.1111111111111, Blast_Score=80, Evalue=3e-15,
Organism=Escherichia coli, GI87081958, Length=379, Percent_Identity=23.2189973614776, Blast_Score=80, Evalue=2e-16,
Organism=Escherichia coli, GI1786223, Length=223, Percent_Identity=25.1121076233184, Blast_Score=75, Evalue=9e-15,
Organism=Caenorhabditis elegans, GI17538396, Length=250, Percent_Identity=34.8, Blast_Score=142, Evalue=3e-34,
Organism=Caenorhabditis elegans, GI17508101, Length=223, Percent_Identity=33.6322869955157, Blast_Score=120, Evalue=1e-27,
Organism=Caenorhabditis elegans, GI71982178, Length=255, Percent_Identity=31.7647058823529, Blast_Score=110, Evalue=1e-24,
Organism=Caenorhabditis elegans, GI17570075, Length=254, Percent_Identity=30.7086614173228, Blast_Score=109, Evalue=2e-24,
Organism=Caenorhabditis elegans, GI17506239, Length=223, Percent_Identity=31.390134529148, Blast_Score=108, Evalue=3e-24,
Organism=Caenorhabditis elegans, GI32563615, Length=202, Percent_Identity=32.6732673267327, Blast_Score=105, Evalue=3e-23,
Organism=Caenorhabditis elegans, GI71985184, Length=234, Percent_Identity=31.6239316239316, Blast_Score=102, Evalue=3e-22,
Organism=Caenorhabditis elegans, GI71985192, Length=234, Percent_Identity=31.6239316239316, Blast_Score=101, Evalue=6e-22,
Organism=Caenorhabditis elegans, GI17534899, Length=365, Percent_Identity=27.6712328767123, Blast_Score=101, Evalue=7e-22,
Organism=Caenorhabditis elegans, GI17569725, Length=224, Percent_Identity=31.25, Blast_Score=100, Evalue=1e-21,
Organism=Caenorhabditis elegans, GI71990804, Length=204, Percent_Identity=29.9019607843137, Blast_Score=97, Evalue=1e-20,
Organism=Caenorhabditis elegans, GI17551932, Length=299, Percent_Identity=25.752508361204, Blast_Score=91, Evalue=1e-18,
Organism=Caenorhabditis elegans, GI17505929, Length=298, Percent_Identity=25.503355704698, Blast_Score=91, Evalue=1e-18,
Organism=Caenorhabditis elegans, GI17533517, Length=226, Percent_Identity=29.2035398230088, Blast_Score=78, Evalue=8e-15,
Organism=Caenorhabditis elegans, GI17531909, Length=119, Percent_Identity=36.1344537815126, Blast_Score=77, Evalue=1e-14,
Organism=Caenorhabditis elegans, GI17534353, Length=224, Percent_Identity=28.5714285714286, Blast_Score=76, Evalue=2e-14,
Organism=Drosophila melanogaster, GI21355753, Length=251, Percent_Identity=34.2629482071713, Blast_Score=129, Evalue=3e-30,
Organism=Drosophila melanogaster, GI21356377, Length=382, Percent_Identity=27.7486910994764, Blast_Score=119, Evalue=3e-27,
Organism=Drosophila melanogaster, GI281363737, Length=247, Percent_Identity=34.412955465587, Blast_Score=115, Evalue=4e-26,
Organism=Drosophila melanogaster, GI24666513, Length=325, Percent_Identity=27.0769230769231, Blast_Score=107, Evalue=1e-23,
Organism=Drosophila melanogaster, GI24660351, Length=247, Percent_Identity=31.5789473684211, Blast_Score=102, Evalue=3e-22,
Organism=Drosophila melanogaster, GI24646207, Length=218, Percent_Identity=31.1926605504587, Blast_Score=102, Evalue=3e-22,
Organism=Drosophila melanogaster, GI19920834, Length=233, Percent_Identity=28.755364806867, Blast_Score=82, Evalue=4e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006089
- InterPro:   IPR006092
- InterPro:   IPR006090
- InterPro:   IPR006091
- InterPro:   IPR009075
- InterPro:   IPR013786
- InterPro:   IPR009100 [H]

Pfam domain/function: PF00441 Acyl-CoA_dh_1; PF02770 Acyl-CoA_dh_M; PF02771 Acyl-CoA_dh_N [H]

EC number: NA

Molecular weight: Translated: 41474; Mature: 41474

Theoretical pI: Translated: 6.82; Mature: 6.82

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNEEEYRLKLREWIRNSAPESLKGRKILFETVEFDDYNELRSWQRKLADAGYLGITWPKE
CCCHHHHHHHHHHHHCCCCCCCCCCEEEEEEECCCCHHHHHHHHHHHHCCCCEEEECCHH
YGGQGLDPIYEVIAYEEFIRAGLPYGRSLGSIGLMVVAPAILKHGNEDQKRRYLPRILRA
HCCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
EDIWCQGFSEPQAGSDLASVTTRAEDKGDYFLVNGQKIWSSYAHIADYMILLARTGEDKY
HHHHHCCCCCCCCCCHHHHHHHCCCCCCCEEEECCHHHHHHHHHHHHHHHHHHCCCCHHH
KGLTMFILNMKQEGIRVSPINQLTGKSDFNTVYFNNVKVPKNNVIGNVGDGWKVAMTVLN
CCEEEEEEECCCCCCEECCCHHHCCCCCCCEEEEECEECCCCCCCCCCCCCHHHHHHHHH
HERFMLGVTMLFTSKIALESLKGVKEKEELEDEVEGLEAFYRRILIKLRKGEDIDVEGSM
CHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHH
LKLLASELLQRIYEIAVMNYDLETIMKEKWYLGMLASRGRTIAGGTSEILRNVVGERALK
HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCEECCCHHHHHHHHHHHHHHC
LPK
CCC
>Mature Secondary Structure
MNEEEYRLKLREWIRNSAPESLKGRKILFETVEFDDYNELRSWQRKLADAGYLGITWPKE
CCCHHHHHHHHHHHHCCCCCCCCCCEEEEEEECCCCHHHHHHHHHHHHCCCCEEEECCHH
YGGQGLDPIYEVIAYEEFIRAGLPYGRSLGSIGLMVVAPAILKHGNEDQKRRYLPRILRA
HCCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
EDIWCQGFSEPQAGSDLASVTTRAEDKGDYFLVNGQKIWSSYAHIADYMILLARTGEDKY
HHHHHCCCCCCCCCCHHHHHHHCCCCCCCEEEECCHHHHHHHHHHHHHHHHHHCCCCHHH
KGLTMFILNMKQEGIRVSPINQLTGKSDFNTVYFNNVKVPKNNVIGNVGDGWKVAMTVLN
CCEEEEEEECCCCCCEECCCHHHCCCCCCCEEEEECEECCCCCCCCCCCCCHHHHHHHHH
HERFMLGVTMLFTSKIALESLKGVKEKEELEDEVEGLEAFYRRILIKLRKGEDIDVEGSM
CHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHH
LKLLASELLQRIYEIAVMNYDLETIMKEKWYLGMLASRGRTIAGGTSEILRNVVGERALK
HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCEECCCHHHHHHHHHHHHHHC
LPK
CCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 12788972 [H]