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The map label for this gene is amt [H]

Identifier: 15897923

GI number: 15897923

Start: 914084

End: 915613

Strand: Direct

Name: amt [H]

Synonym: SSO1054

Alternate gene names: 15897923

Gene position: 914084-915613 (Clockwise)

Preceding gene: 15897922

Following gene: 15897924

Centisome position: 30.55

GC content: 40.26

Gene sequence:

>1530_bases
ATGAAATCGTGGAAATTCAAGGCACTGTTAATTGGCCAAGTAATATTGGTAATGCTTTTATTTTCAAATATTTTAGCACA
TTCTCAAACTACAACAAATTCATCTGCACTTCAACAACTAAATCAATCAGTGCAATCAATTCTTAACAGAACGTCTAGCT
ATCCAGCTGCAGCAGTACCATCTTGGCTTGATACTGGAAGTAATGCGTGGATGTTAACTGCAGCGACTTTTGTAGGATTG
CAAAGCGTTCCTGGTGTTGCGTTATATTATGCTGGATTGTCTAAAAAGAAATATGCAGTGAACTCTGCATTAATGATATT
TTATGCATTTGCGGCAGTGTTAGTTATATGGATAATAGCCGGATACAGTTTTGGTTTCGGTTATCCCGCACTGGTTTCCA
TTCACGGTTATGGAATATTCGGATATCCTATTCCCGCATGGGGAGGGCTTTTTGAAGCTTCACAAACCACCTATGGTCCT
AGTGGTGCTCACGCTAATATACCAACCGCTACCTTTATATTCTTCCAATTCGTCTTTGCTGCAATAACGCCAATATTATT
AGCCGGAGGAGTATTAGAAAGAATGAACTTTAAAGCTTGGATGGTTTTTGTACCTTTCTGGTCTCTCCTAGTGTATAGTC
CAGTTGCATACTGGTTATTTGCAGGAGGATGGTTAAATCAATTAGGTGCTGTAGACTTCTCTGGAGGTTATGTAATACAT
GTAGATGCAGGAGTAGGAGCTCTAGCTGCAGCGTTGGCTATAGGTCCTAGATTAGCTTCTGAAAGAAAATTAGAGGCGCA
TAGCTTACCTTTAGTTTTAGTTGGAGCTGGCTTAATTTGGTTGGGGTGGGATGGGTTCAATGGCGGTGATCCATTAGGAG
CTACAGTGGATGCTGCAATCGCAGTGCTGAATACGAATATTGCTACCGCAGTTAGTGCTGTAGTATGGATGTTGATGGAT
ATGAAATTCTTTGGAAAACCAACATTAATTGGAGCTACTAGTGGCGCTATAACTGGCCTAGTTGCAATTACTCCAGCTGC
AGGTTATGTAAACGGATGGGAAGCCGCATTAATTGGAATATTTTCTGGAAGTATACCATGGATGGCATTATATTGGTTAG
AGCCAAAGCTTAGAGTTGATGATACTTTAGGTGTGTTCTCTACTCACGGTATAGCTGGAATAGTAGGTGGTTTATTAACT
GGAGTTTTTGCAAATCCCGCAGTCACACAGTTTGTGGCTCCGGGATTAACAGGAGCTCTCTATGGGAATTGGTATCAACT
AGGAATTCAAGCACTTGCAGCAGTAATAGTATTCGTATATGACTTCGCAATAACTTTTGGCCTTCTAAAGTTTATAGGAT
TATTTATACCATTACAAGCGCCACCTCAAGAACTAGCAATAGGAGATTACGCTATGCACGGAGAGGTAGCATATTCAGAA
TTATTAGCTACAATTCCAGAAAGCGCTAAATCTAAGGAACAGTCAGTCGTTTTACCTAAGAAAGAAAAGGAGGAGAATAG
TGAAGAATAA

Upstream 100 bases:

>100_bases
ACGAATATATTTTAAAAATATAGCCATATTAATGAAAAGTTATTATGTAGATCCATAGCAATCCTTAATAATTATTTTTT
ATCTGATTACCTAGATAGAG

Downstream 100 bases:

>100_bases
ATAGAAATATATTTTTTGTTAAGTAATTTATTCTCTGCTTTTCCACGTATTGTATGAACGCTTAATAACTTGTATATTTA
ATTTTTTAATTAGTGGGCCG

Product: ammonium transporter

Products: NH3 [Cytoplasm] [C]

Alternate protein names: Ammonia transporter [H]

Number of amino acids: Translated: 509; Mature: 509

Protein sequence:

>509_residues
MKSWKFKALLIGQVILVMLLFSNILAHSQTTTNSSALQQLNQSVQSILNRTSSYPAAAVPSWLDTGSNAWMLTAATFVGL
QSVPGVALYYAGLSKKKYAVNSALMIFYAFAAVLVIWIIAGYSFGFGYPALVSIHGYGIFGYPIPAWGGLFEASQTTYGP
SGAHANIPTATFIFFQFVFAAITPILLAGGVLERMNFKAWMVFVPFWSLLVYSPVAYWLFAGGWLNQLGAVDFSGGYVIH
VDAGVGALAAALAIGPRLASERKLEAHSLPLVLVGAGLIWLGWDGFNGGDPLGATVDAAIAVLNTNIATAVSAVVWMLMD
MKFFGKPTLIGATSGAITGLVAITPAAGYVNGWEAALIGIFSGSIPWMALYWLEPKLRVDDTLGVFSTHGIAGIVGGLLT
GVFANPAVTQFVAPGLTGALYGNWYQLGIQALAAVIVFVYDFAITFGLLKFIGLFIPLQAPPQELAIGDYAMHGEVAYSE
LLATIPESAKSKEQSVVLPKKEKEENSEE

Sequences:

>Translated_509_residues
MKSWKFKALLIGQVILVMLLFSNILAHSQTTTNSSALQQLNQSVQSILNRTSSYPAAAVPSWLDTGSNAWMLTAATFVGL
QSVPGVALYYAGLSKKKYAVNSALMIFYAFAAVLVIWIIAGYSFGFGYPALVSIHGYGIFGYPIPAWGGLFEASQTTYGP
SGAHANIPTATFIFFQFVFAAITPILLAGGVLERMNFKAWMVFVPFWSLLVYSPVAYWLFAGGWLNQLGAVDFSGGYVIH
VDAGVGALAAALAIGPRLASERKLEAHSLPLVLVGAGLIWLGWDGFNGGDPLGATVDAAIAVLNTNIATAVSAVVWMLMD
MKFFGKPTLIGATSGAITGLVAITPAAGYVNGWEAALIGIFSGSIPWMALYWLEPKLRVDDTLGVFSTHGIAGIVGGLLT
GVFANPAVTQFVAPGLTGALYGNWYQLGIQALAAVIVFVYDFAITFGLLKFIGLFIPLQAPPQELAIGDYAMHGEVAYSE
LLATIPESAKSKEQSVVLPKKEKEENSEE
>Mature_509_residues
MKSWKFKALLIGQVILVMLLFSNILAHSQTTTNSSALQQLNQSVQSILNRTSSYPAAAVPSWLDTGSNAWMLTAATFVGL
QSVPGVALYYAGLSKKKYAVNSALMIFYAFAAVLVIWIIAGYSFGFGYPALVSIHGYGIFGYPIPAWGGLFEASQTTYGP
SGAHANIPTATFIFFQFVFAAITPILLAGGVLERMNFKAWMVFVPFWSLLVYSPVAYWLFAGGWLNQLGAVDFSGGYVIH
VDAGVGALAAALAIGPRLASERKLEAHSLPLVLVGAGLIWLGWDGFNGGDPLGATVDAAIAVLNTNIATAVSAVVWMLMD
MKFFGKPTLIGATSGAITGLVAITPAAGYVNGWEAALIGIFSGSIPWMALYWLEPKLRVDDTLGVFSTHGIAGIVGGLLT
GVFANPAVTQFVAPGLTGALYGNWYQLGIQALAAVIVFVYDFAITFGLLKFIGLFIPLQAPPQELAIGDYAMHGEVAYSE
LLATIPESAKSKEQSVVLPKKEKEENSEE

Specific function: Involved in the uptake of ammonia [H]

COG id: COG0004

COG function: function code P; Ammonia permease

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ammonium transporter (TC 2.A.49) family [H]

Homologues:

Organism=Escherichia coli, GI1786656, Length=425, Percent_Identity=34.8235294117647, Blast_Score=221, Evalue=1e-58,
Organism=Caenorhabditis elegans, GI133931100, Length=471, Percent_Identity=25.4777070063694, Blast_Score=107, Evalue=2e-23,
Organism=Caenorhabditis elegans, GI17550182, Length=347, Percent_Identity=27.0893371757925, Blast_Score=95, Evalue=8e-20,
Organism=Caenorhabditis elegans, GI17550180, Length=337, Percent_Identity=25.2225519287834, Blast_Score=94, Evalue=2e-19,
Organism=Caenorhabditis elegans, GI32564042, Length=312, Percent_Identity=26.9230769230769, Blast_Score=76, Evalue=5e-14,
Organism=Saccharomyces cerevisiae, GI6324187, Length=442, Percent_Identity=34.1628959276018, Blast_Score=222, Evalue=1e-58,
Organism=Saccharomyces cerevisiae, GI6325396, Length=426, Percent_Identity=28.4037558685446, Blast_Score=151, Evalue=2e-37,
Organism=Saccharomyces cerevisiae, GI6321559, Length=327, Percent_Identity=28.1345565749235, Blast_Score=134, Evalue=3e-32,
Organism=Drosophila melanogaster, GI161078314, Length=323, Percent_Identity=30.3405572755418, Blast_Score=113, Evalue=4e-25,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001905
- InterPro:   IPR018047 [H]

Pfam domain/function: PF00909 Ammonium_transp [H]

EC number: NA

Molecular weight: Translated: 54110; Mature: 54110

Theoretical pI: Translated: 6.16; Mature: 6.16

Prosite motif: PS00213 LIPOCALIN ; PS01219 AMMONIUM_TRANSP

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKSWKFKALLIGQVILVMLLFSNILAHSQTTTNSSALQQLNQSVQSILNRTSSYPAAAVP
CCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCC
SWLDTGSNAWMLTAATFVGLQSVPGVALYYAGLSKKKYAVNSALMIFYAFAAVLVIWIIA
HHHCCCCCCEEEHHHHHHHHHCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
GYSFGFGYPALVSIHGYGIFGYPIPAWGGLFEASQTTYGPSGAHANIPTATFIFFQFVFA
HCCCCCCCCEEEEEECCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHH
AITPILLAGGVLERMNFKAWMVFVPFWSLLVYSPVAYWLFAGGWLNQLGAVDFSGGYVIH
HHHHHHHHCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCEEECCCEEEE
VDAGVGALAAALAIGPRLASERKLEAHSLPLVLVGAGLIWLGWDGFNGGDPLGATVDAAI
EECCHHHHHHHHHHCCHHCCCCCCHHHCCCEEEEECCEEEEECCCCCCCCCCCHHHHHHH
AVLNTNIATAVSAVVWMLMDMKFFGKPTLIGATSGAITGLVAITPAAGYVNGWEAALIGI
HHHHCHHHHHHHHHHHHHHHHHHCCCCCEEECCCCHHHEEEEECCCCCCCCCHHHHEEEE
FSGSIPWMALYWLEPKLRVDDTLGVFSTHGIAGIVGGLLTGVFANPAVTQFVAPGLTGAL
ECCCCCEEEEEEECCCCCCCCCCCHHHHCCHHHHHHHHHHHHHCCHHHHHHHCCCCCHHH
YGNWYQLGIQALAAVIVFVYDFAITFGLLKFIGLFIPLQAPPQELAIGDYAMHGEVAYSE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCCCCHHCCHHHHHH
LLATIPESAKSKEQSVVLPKKEKEENSEE
HHHHCCHHHCCCCCCEECCCHHCCCCCCC
>Mature Secondary Structure
MKSWKFKALLIGQVILVMLLFSNILAHSQTTTNSSALQQLNQSVQSILNRTSSYPAAAVP
CCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCC
SWLDTGSNAWMLTAATFVGLQSVPGVALYYAGLSKKKYAVNSALMIFYAFAAVLVIWIIA
HHHCCCCCCEEEHHHHHHHHHCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
GYSFGFGYPALVSIHGYGIFGYPIPAWGGLFEASQTTYGPSGAHANIPTATFIFFQFVFA
HCCCCCCCCEEEEEECCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHH
AITPILLAGGVLERMNFKAWMVFVPFWSLLVYSPVAYWLFAGGWLNQLGAVDFSGGYVIH
HHHHHHHHCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCEEECCCEEEE
VDAGVGALAAALAIGPRLASERKLEAHSLPLVLVGAGLIWLGWDGFNGGDPLGATVDAAI
EECCHHHHHHHHHHCCHHCCCCCCHHHCCCEEEEECCEEEEECCCCCCCCCCCHHHHHHH
AVLNTNIATAVSAVVWMLMDMKFFGKPTLIGATSGAITGLVAITPAAGYVNGWEAALIGI
HHHHCHHHHHHHHHHHHHHHHHHCCCCCEEECCCCHHHEEEEECCCCCCCCCHHHHEEEE
FSGSIPWMALYWLEPKLRVDDTLGVFSTHGIAGIVGGLLTGVFANPAVTQFVAPGLTGAL
ECCCCCEEEEEEECCCCCCCCCCCHHHHCCHHHHHHHHHHHHHCCHHHHHHHCCCCCHHH
YGNWYQLGIQALAAVIVFVYDFAITFGLLKFIGLFIPLQAPPQELAIGDYAMHGEVAYSE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCCCCHHCCHHHHHH
LLATIPESAKSKEQSVVLPKKEKEENSEE
HHHHCCHHHCCCCCCEECCCHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NH3 [Periplasm] [C]

Specific reaction: NH3 [Periplasm] = NH3 [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9537320 [H]