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The map label for this gene is 15897882

Identifier: 15897882

GI number: 15897882

Start: 864330

End: 864959

Strand: Direct

Name: 15897882

Synonym: SSO1008

Alternate gene names: NA

Gene position: 864330-864959 (Clockwise)

Preceding gene: 15897881

Following gene: 15897887

Centisome position: 28.89

GC content: 30.48

Gene sequence:

>630_bases
GTGAGAAAACAACTCTCTATTGGAATGAAGAATCTTTATAAAATTAACTTTTCAATATCACACCAAGGTTGCTGGACCAG
CAAAATAAAAGATAGTGTTGTTACCTTAAATGTATCAAAATATAATAATAAGAAAGTCAGAGTCACAATAGCTTCTCCAA
AATTAATAGTAACTGACCTAAAAAGGTCAGAAAACGTTTACGAAATTCTAAAGTATAGAAAGGTAAAAGGGGGTTATATA
ATTGACTTCCTTGAAGATCTGAGTACTACAATTTCAGGATATATACTCTCGAGCAGTAATATATTAGAATATAGAAATGT
CGTAAGGGAAGGAATAGAAAAGTGGGAAGTAACAACTTTAGCCAAATCTTTAGTAGGCAAATTATCAGAAAGATTTCCCA
TAGATAGCATTGTAGTTAAAGAAATAAAGTTTTCAGATATGTTCTATAATGGTTTGACAGAAAAGGAGATACTAGTCCTA
AAAACCGCAATAACTATGGGATATTTCAATTATCCAAGGCAAATAAAAGCTAAGGAAATTGCTGAAAAATTAGGTATCTC
CAAGCAAGATTTCCTTTATCATCTGCGAAAATCAATAGAGAAAATAATTTTCTCATCAGTTATAGAATAG

Upstream 100 bases:

>100_bases
TAAAAACCCTTAACTTTCTTAAAAATCTTCCAATTATTTCAGTAGTGTCTATCTTTTAATATGAAAAATTTTTGATGTTT
TAGTTTGAAAAATTTATTAA

Downstream 100 bases:

>100_bases
TAATTCATGCATATTAAATTACTAAAAATTTAAGTGATTAAAAAGGTTTAAAAATAATATAAGACTCCTTTATATTCAAA
GACTATAATCACCGAACTTC

Product: hypothetical protein

Products: NA

Alternate protein names: Bacterio-Opsin Activator; HTH Domain-Containing Protein

Number of amino acids: Translated: 209; Mature: 209

Protein sequence:

>209_residues
MRKQLSIGMKNLYKINFSISHQGCWTSKIKDSVVTLNVSKYNNKKVRVTIASPKLIVTDLKRSENVYEILKYRKVKGGYI
IDFLEDLSTTISGYILSSSNILEYRNVVREGIEKWEVTTLAKSLVGKLSERFPIDSIVVKEIKFSDMFYNGLTEKEILVL
KTAITMGYFNYPRQIKAKEIAEKLGISKQDFLYHLRKSIEKIIFSSVIE

Sequences:

>Translated_209_residues
MRKQLSIGMKNLYKINFSISHQGCWTSKIKDSVVTLNVSKYNNKKVRVTIASPKLIVTDLKRSENVYEILKYRKVKGGYI
IDFLEDLSTTISGYILSSSNILEYRNVVREGIEKWEVTTLAKSLVGKLSERFPIDSIVVKEIKFSDMFYNGLTEKEILVL
KTAITMGYFNYPRQIKAKEIAEKLGISKQDFLYHLRKSIEKIIFSSVIE
>Mature_209_residues
MRKQLSIGMKNLYKINFSISHQGCWTSKIKDSVVTLNVSKYNNKKVRVTIASPKLIVTDLKRSENVYEILKYRKVKGGYI
IDFLEDLSTTISGYILSSSNILEYRNVVREGIEKWEVTTLAKSLVGKLSERFPIDSIVVKEIKFSDMFYNGLTEKEILVL
KTAITMGYFNYPRQIKAKEIAEKLGISKQDFLYHLRKSIEKIIFSSVIE

Specific function: Unknown

COG id: COG3413

COG function: function code R; Predicted DNA binding protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 24123; Mature: 24123

Theoretical pI: Translated: 10.18; Mature: 10.18

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRKQLSIGMKNLYKINFSISHQGCWTSKIKDSVVTLNVSKYNNKKVRVTIASPKLIVTDL
CCCCHHCCCCCEEEEEEEECCCCCCHHHHCCCEEEEEEECCCCCEEEEEEECCEEEEECC
KRSENVYEILKYRKVKGGYIIDFLEDLSTTISGYILSSSNILEYRNVVREGIEKWEVTTL
CCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHEEECCCCHHHHHHHHHHHHHHHHHHHH
AKSLVGKLSERFPIDSIVVKEIKFSDMFYNGLTEKEILVLKTAITMGYFNYPRQIKAKEI
HHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHH
AEKLGISKQDFLYHLRKSIEKIIFSSVIE
HHHHCCCHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MRKQLSIGMKNLYKINFSISHQGCWTSKIKDSVVTLNVSKYNNKKVRVTIASPKLIVTDL
CCCCHHCCCCCEEEEEEEECCCCCCHHHHCCCEEEEEEECCCCCEEEEEEECCEEEEECC
KRSENVYEILKYRKVKGGYIIDFLEDLSTTISGYILSSSNILEYRNVVREGIEKWEVTTL
CCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHEEECCCCHHHHHHHHHHHHHHHHHHHH
AKSLVGKLSERFPIDSIVVKEIKFSDMFYNGLTEKEILVLKTAITMGYFNYPRQIKAKEI
HHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHH
AEKLGISKQDFLYHLRKSIEKIIFSSVIE
HHHHCCCHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA