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The map label for this gene is glcD [H]

Identifier: 15897879

GI number: 15897879

Start: 860974

End: 862209

Strand: Direct

Name: glcD [H]

Synonym: SSO1004

Alternate gene names: 15897879

Gene position: 860974-862209 (Clockwise)

Preceding gene: 15897878

Following gene: 15897880

Centisome position: 28.77

GC content: 36.41

Gene sequence:

>1236_bases
ATGTTTATGATGAAATTAGACGAACTTGAGAAAGAACTTGGTTCAAAGCTTATTATGGACAATAACGTCATAGATCACTA
CTCCAAATCTCCCTATTTAGTCTCTCCAGTCCTATCGAAGATGGGTAAGAGAGTGCTAGGAGTAGTAATTGCTGAAGATA
GGTATGACATTGAATTCGTTGTTAAATTTTGCGATATTCATAGAATCCCCTTATTAGCTAGGGGTGCAGGAACATCTACA
ATAGGGCAAGTACTACCAATACATCCCTCTATTGTATTGGATATTCAGAAATTAAATAAAACTATGGAATATGACGAGAA
GTATTTGAAAATTTCCCCCGGAGTAAAGGTTCTAGATGCCCTGAATTACCTTAGGAAGAGGGGAAAAGAATTACAAGTAT
ATCCTAGTAGCTTTTACATTTCCACTTTAGGAGGATATATTGCAGGAGGAGATGTAGGGATTGGATCATACCAATATGGC
TATCATTTTCATAACGGTGGAATTAGACGTGTAAAAGTAGTGGGATCTACTGGAACTTTTGAATTAACCGGAGAAAATAC
CTTAGCAGTAGCCCAAGCTGCTGGAACAACTGGCATTATAGTTGAGGCTGATATAGCTACTGTAGACTATGAAGACTGGA
AAGACCAACTAGTAAGATTTGATGAACTAGGTAAGTTGGTAAAATTCCTAAAAGACGTAGAGAACGAAAGAGATAAGATA
AGGAGAATCACTATAGAGGATCAAGAAGCCTTATCATTAGTTGCCAAAAATAGAGCAATTCCGGGAAAATGGAATGTAAT
ACTTGCAAGTACAAAAAGCTTTGGAGAAGAAGTGGAGATGAAATTCTTAGACGAATTGGCTTTTGCGGCTATTTACGTTA
CCATGAGCAGACTAACCAATTTCTCCGAATATTTTTACGAGGTTAGACTACTCTCTCTCGATAGTTTTCTCAAAGTAGTA
AGCCAAGTTAAAAATGCTCTAGGTTCTAATGTACTAATACATGGCGATGTCATGACATTAAGAGGAGAAACCGTAATTTA
CACAGTGTTCATCTCTGATAGACAAAACTTCAACATAATAGATTCAATAATGACAAAGGAGGGAATACCATTTGAAATAC
ATTCCTTAGTTGTAAATGACAGGGTAGATGAGGAATACAGATTAGAACTAATGAAAAAATACAAGCGAATAGTAGATCCT
CACAATATCCTTAATCCGGGGAAGTTGAGAATATGA

Upstream 100 bases:

>100_bases
TAAGATATAATTCATTAGCTCTCCTTATTGCCTATTCCTTGTCAAAAACATAATCATTTTACATTGTTAAAGGTAGTCCT
TTAATATTAATTTATAAATA

Downstream 100 bases:

>100_bases
TATTAAAAACACTATTAGAAGTTATAGACATCCTAGAATCTAAAGATCCATTACAAAAGATAAGGGAAAGGCTAGAAAGT
AAAGTCAAATATGAAGAAAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 411; Mature: 411

Protein sequence:

>411_residues
MFMMKLDELEKELGSKLIMDNNVIDHYSKSPYLVSPVLSKMGKRVLGVVIAEDRYDIEFVVKFCDIHRIPLLARGAGTST
IGQVLPIHPSIVLDIQKLNKTMEYDEKYLKISPGVKVLDALNYLRKRGKELQVYPSSFYISTLGGYIAGGDVGIGSYQYG
YHFHNGGIRRVKVVGSTGTFELTGENTLAVAQAAGTTGIIVEADIATVDYEDWKDQLVRFDELGKLVKFLKDVENERDKI
RRITIEDQEALSLVAKNRAIPGKWNVILASTKSFGEEVEMKFLDELAFAAIYVTMSRLTNFSEYFYEVRLLSLDSFLKVV
SQVKNALGSNVLIHGDVMTLRGETVIYTVFISDRQNFNIIDSIMTKEGIPFEIHSLVVNDRVDEEYRLELMKKYKRIVDP
HNILNPGKLRI

Sequences:

>Translated_411_residues
MFMMKLDELEKELGSKLIMDNNVIDHYSKSPYLVSPVLSKMGKRVLGVVIAEDRYDIEFVVKFCDIHRIPLLARGAGTST
IGQVLPIHPSIVLDIQKLNKTMEYDEKYLKISPGVKVLDALNYLRKRGKELQVYPSSFYISTLGGYIAGGDVGIGSYQYG
YHFHNGGIRRVKVVGSTGTFELTGENTLAVAQAAGTTGIIVEADIATVDYEDWKDQLVRFDELGKLVKFLKDVENERDKI
RRITIEDQEALSLVAKNRAIPGKWNVILASTKSFGEEVEMKFLDELAFAAIYVTMSRLTNFSEYFYEVRLLSLDSFLKVV
SQVKNALGSNVLIHGDVMTLRGETVIYTVFISDRQNFNIIDSIMTKEGIPFEIHSLVVNDRVDEEYRLELMKKYKRIVDP
HNILNPGKLRI
>Mature_411_residues
MFMMKLDELEKELGSKLIMDNNVIDHYSKSPYLVSPVLSKMGKRVLGVVIAEDRYDIEFVVKFCDIHRIPLLARGAGTST
IGQVLPIHPSIVLDIQKLNKTMEYDEKYLKISPGVKVLDALNYLRKRGKELQVYPSSFYISTLGGYIAGGDVGIGSYQYG
YHFHNGGIRRVKVVGSTGTFELTGENTLAVAQAAGTTGIIVEADIATVDYEDWKDQLVRFDELGKLVKFLKDVENERDKI
RRITIEDQEALSLVAKNRAIPGKWNVILASTKSFGEEVEMKFLDELAFAAIYVTMSRLTNFSEYFYEVRLLSLDSFLKVV
SQVKNALGSNVLIHGDVMTLRGETVIYTVFISDRQNFNIIDSIMTKEGIPFEIHSLVVNDRVDEEYRLELMKKYKRIVDP
HNILNPGKLRI

Specific function: Unknown

COG id: COG0277

COG function: function code C; FAD/FMN-containing dehydrogenases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 FAD-binding PCMH-type domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016166
- InterPro:   IPR016167
- InterPro:   IPR016164
- InterPro:   IPR016168
- InterPro:   IPR004113
- InterPro:   IPR004490
- InterPro:   IPR006094
- InterPro:   IPR016171 [H]

Pfam domain/function: PF02913 FAD-oxidase_C; PF01565 FAD_binding_4 [H]

EC number: NA

Molecular weight: Translated: 46528; Mature: 46528

Theoretical pI: Translated: 6.74; Mature: 6.74

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFMMKLDELEKELGSKLIMDNNVIDHYSKSPYLVSPVLSKMGKRVLGVVIAEDRYDIEFV
CCEEHHHHHHHHHCCEEEECCCHHHHCCCCCEEHHHHHHHCCHHEEEEEEECCCCCHHHH
VKFCDIHRIPLLARGAGTSTIGQVLPIHPSIVLDIQKLNKTMEYDEKYLKISPGVKVLDA
HHHHCCCCCCEEECCCCCCCCCCEECCCCHHEEEHHHHHHHHHHCCCEEEECCCHHHHHH
LNYLRKRGKELQVYPSSFYISTLGGYIAGGDVGIGSYQYGYHFHNGGIRRVKVVGSTGTF
HHHHHHCCCEEEEECCEEEEEHHCCEEECCCCCCCCEECCEEEECCCEEEEEEEECCCEE
ELTGENTLAVAQAAGTTGIIVEADIATVDYEDWKDQLVRFDELGKLVKFLKDVENERDKI
EECCCCEEEEEECCCCCEEEEEECEEECCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHH
RRITIEDQEALSLVAKNRAIPGKWNVILASTKSFGEEVEMKFLDELAFAAIYVTMSRLTN
EEEEECCHHHHHHHHHCCCCCCCEEEEEEECHHCCHHHHHHHHHHHHHHHHHHHHHHHHH
FSEYFYEVRLLSLDSFLKVVSQVKNALGSNVLIHGDVMTLRGETVIYTVFISDRQNFNII
HHHHHHHHHEECHHHHHHHHHHHHHHHCCCEEEECCEEEEECCEEEEEEEEECCCCCHHH
DSIMTKEGIPFEIHSLVVNDRVDEEYRLELMKKYKRIVDPHNILNPGKLRI
HHHHHCCCCCEEEEEEEECCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCC
>Mature Secondary Structure
MFMMKLDELEKELGSKLIMDNNVIDHYSKSPYLVSPVLSKMGKRVLGVVIAEDRYDIEFV
CCEEHHHHHHHHHCCEEEECCCHHHHCCCCCEEHHHHHHHCCHHEEEEEEECCCCCHHHH
VKFCDIHRIPLLARGAGTSTIGQVLPIHPSIVLDIQKLNKTMEYDEKYLKISPGVKVLDA
HHHHCCCCCCEEECCCCCCCCCCEECCCCHHEEEHHHHHHHHHHCCCEEEECCCHHHHHH
LNYLRKRGKELQVYPSSFYISTLGGYIAGGDVGIGSYQYGYHFHNGGIRRVKVVGSTGTF
HHHHHHCCCEEEEECCEEEEEHHCCEEECCCCCCCCEECCEEEECCCEEEEEEEECCCEE
ELTGENTLAVAQAAGTTGIIVEADIATVDYEDWKDQLVRFDELGKLVKFLKDVENERDKI
EECCCCEEEEEECCCCCEEEEEECEEECCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHH
RRITIEDQEALSLVAKNRAIPGKWNVILASTKSFGEEVEMKFLDELAFAAIYVTMSRLTN
EEEEECCHHHHHHHHHCCCCCCCEEEEEEECHHCCHHHHHHHHHHHHHHHHHHHHHHHHH
FSEYFYEVRLLSLDSFLKVVSQVKNALGSNVLIHGDVMTLRGETVIYTVFISDRQNFNII
HHHHHHHHHEECHHHHHHHHHHHHHHHCCCEEEECCEEEEECCEEEEEEEEECCCCCHHH
DSIMTKEGIPFEIHSLVVNDRVDEEYRLELMKKYKRIVDPHNILNPGKLRI
HHHHHCCCCCEEEEEEEECCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8969504; 9384377 [H]