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The map label for this gene is treX-like

Identifier: 15897868

GI number: 15897868

Start: 849392

End: 851026

Strand: Direct

Name: treX-like

Synonym: SSO0991

Alternate gene names: NA

Gene position: 849392-851026 (Clockwise)

Preceding gene: 15897867

Following gene: 15897869

Centisome position: 28.39

GC content: 34.68

Gene sequence:

>1635_bases
ATGATCCCCTTAGACCAGTGTGAGGAGGAGTGGCTTTTACCAACTAGGACTGGAGGATATGCATCATCTACAATATGCGG
AATAAACGCTAGAACTTATCATGGATATCTAATAGTACCACTAAACCAACCACATCATAGATTTCTAATACTTTCCAAGT
TTGAGGATTTCTTACTTATTAACGGCGATACATACTCGATGTCTACTAATTATTATCCCGGCTCCTACTATCCAGATGGT
TATAAATATTTAATTAAAGTTGAAAAAAACAGTAATAGCAAAATAACTTGGCATTATGACTTTGGTTATTCGCAAGTGGA
AAAAACTCTAAGAGTTCATAAAGGCTATAATGCAATAACAATCACCTATATTGCAACTAGGGGTAAATTCAAATTATGTC
CCTTCATTACCTTTAGAAGCCATCATCTAGCTAAGAAATTACAGAATGAGTTCTTTACATACGAGATTTATCCTCCAAAT
ACAATTTACATATTATATGAGGGGAAGAGGATTTTGAACTTTGAGATTCATGATAAGTATGAGCTTTTTAATTCTGGTTA
TTGGTACTATAACTTTATTTATAAATTAGATCAAGAATTAGGAAACAACTACATAGAAGATTTATATAATCCTTTCTGCA
TTGTCTCAACCTCAAATAAGATCTCGGTTACGGTATATTATGATCAACGTCCAAAGGATCTAAGCGTTGAAGAAAATGAA
CATTATGACATTTTAAAACTTCTTTCGGCTGCAGGGAAAGACTTTGTAGTTAAAGGGAAAGATGGTTGGGCAATCATAGC
AGGATATCATTGGTTTGACGAATGGGGTAGAGATACTTTCATATCTTTGGAGGGACTTTTGCTTGTTGACAAGCAGTATG
ATATTGCTAAAGAGATAATTCTCAAGTATTTAAATCTAGAAAAAAGGGGTATGCTACCGAACAATTTCATAAGCTATAAT
GGAGAACCAGTATACAGAGGTGTCGATATTTCGCTCTGGGCTATAAATGCAATTTACAAAACTTATATTTACTCACGAGA
TAAGAACTTCATCAGAAAGGTAGTAGATAAGGTTCTAGACATAATAGACTGGTATTCCAAGGGAAATGGGGTAATCTATA
ACGTTGATAACCTAATTTTCCATAAAGGAGCCCCTAGAACCTGGATGGACGCTTCATATGATAGTAGGATAGTAACCCCC
AGAGAAGGTGCTGCAGTTGAGATAAACGCATTATGGTATAACGCACTAAGAGTAACTGAATTCTTACTTAACGAACTTGG
AGAAAAAGCAGAATATTTATCTGAAAAAGCAGAAAGTGTAAAGAAGTCGTTTGCAGAAAAATTCATTTCACAGGATGGTC
TTTACGATTATATAAACTGGGATAACATTCCCGATAAGAGCATAAGACCTAATCAAATATTTTCCATTTCTCTACCTTTC
CCAATAATAGACGATAAGAGCATAGCTTCTAAGATTTTAACACTTATTGAAAGTAAGTTGCTTAGACAATATGGATTAAG
TAGTTTAAGTAGAGAAGATCCAAACTATAAACCAGTATATAAGGGGGATAGGAGAAGTAGAGAAAGCTTACCACAATGGA
CCCATATGGCCTTGGTTACTAGGCGCCTATGTTGA

Upstream 100 bases:

>100_bases
CCAGAAACTTTTGAGCCAACTTCAGTTACACCTTTGGTATGGTCTCATGCTGAATTCATAATAGCAATTAATAAGCTCTT
AAACCATATATAACCCTTGA

Downstream 100 bases:

>100_bases
TTCTAAATTAAGACTTGAAAGCAACATAATGGAACTAAAACTTTTGTTAGAGTACTTCAATCCCCTTTTAGCTCATGCTA
GCAAAAACCAAGGATATATT

Product: glycogen debranching protein

Products: NA

Alternate protein names: Glycogen Debranching Protein; Amylo-Alpha-16-Glucosidase; Glycogen Debranching -Related Protein; Glycogen Debranching ; 4-Alpha-Glucanotransferase; Amylo-Alpha-1 6-Glucosidase; Glyen Debranching; Amylo-Alpha-1 6-Glucosidase Family; Amylo-1 6-Glucosidase; Glycogen Debranching Archaeal Type; AmylO-Alpha-16-Glucosidase; Glycogen Debranching Isoform 1 Related Protein; Glycogen Debranching Family Protein; Glycogen Debranching /Alpha-Amylase

Number of amino acids: Translated: 544; Mature: 544

Protein sequence:

>544_residues
MIPLDQCEEEWLLPTRTGGYASSTICGINARTYHGYLIVPLNQPHHRFLILSKFEDFLLINGDTYSMSTNYYPGSYYPDG
YKYLIKVEKNSNSKITWHYDFGYSQVEKTLRVHKGYNAITITYIATRGKFKLCPFITFRSHHLAKKLQNEFFTYEIYPPN
TIYILYEGKRILNFEIHDKYELFNSGYWYYNFIYKLDQELGNNYIEDLYNPFCIVSTSNKISVTVYYDQRPKDLSVEENE
HYDILKLLSAAGKDFVVKGKDGWAIIAGYHWFDEWGRDTFISLEGLLLVDKQYDIAKEIILKYLNLEKRGMLPNNFISYN
GEPVYRGVDISLWAINAIYKTYIYSRDKNFIRKVVDKVLDIIDWYSKGNGVIYNVDNLIFHKGAPRTWMDASYDSRIVTP
REGAAVEINALWYNALRVTEFLLNELGEKAEYLSEKAESVKKSFAEKFISQDGLYDYINWDNIPDKSIRPNQIFSISLPF
PIIDDKSIASKILTLIESKLLRQYGLSSLSREDPNYKPVYKGDRRSRESLPQWTHMALVTRRLC

Sequences:

>Translated_544_residues
MIPLDQCEEEWLLPTRTGGYASSTICGINARTYHGYLIVPLNQPHHRFLILSKFEDFLLINGDTYSMSTNYYPGSYYPDG
YKYLIKVEKNSNSKITWHYDFGYSQVEKTLRVHKGYNAITITYIATRGKFKLCPFITFRSHHLAKKLQNEFFTYEIYPPN
TIYILYEGKRILNFEIHDKYELFNSGYWYYNFIYKLDQELGNNYIEDLYNPFCIVSTSNKISVTVYYDQRPKDLSVEENE
HYDILKLLSAAGKDFVVKGKDGWAIIAGYHWFDEWGRDTFISLEGLLLVDKQYDIAKEIILKYLNLEKRGMLPNNFISYN
GEPVYRGVDISLWAINAIYKTYIYSRDKNFIRKVVDKVLDIIDWYSKGNGVIYNVDNLIFHKGAPRTWMDASYDSRIVTP
REGAAVEINALWYNALRVTEFLLNELGEKAEYLSEKAESVKKSFAEKFISQDGLYDYINWDNIPDKSIRPNQIFSISLPF
PIIDDKSIASKILTLIESKLLRQYGLSSLSREDPNYKPVYKGDRRSRESLPQWTHMALVTRRLC
>Mature_544_residues
MIPLDQCEEEWLLPTRTGGYASSTICGINARTYHGYLIVPLNQPHHRFLILSKFEDFLLINGDTYSMSTNYYPGSYYPDG
YKYLIKVEKNSNSKITWHYDFGYSQVEKTLRVHKGYNAITITYIATRGKFKLCPFITFRSHHLAKKLQNEFFTYEIYPPN
TIYILYEGKRILNFEIHDKYELFNSGYWYYNFIYKLDQELGNNYIEDLYNPFCIVSTSNKISVTVYYDQRPKDLSVEENE
HYDILKLLSAAGKDFVVKGKDGWAIIAGYHWFDEWGRDTFISLEGLLLVDKQYDIAKEIILKYLNLEKRGMLPNNFISYN
GEPVYRGVDISLWAINAIYKTYIYSRDKNFIRKVVDKVLDIIDWYSKGNGVIYNVDNLIFHKGAPRTWMDASYDSRIVTP
REGAAVEINALWYNALRVTEFLLNELGEKAEYLSEKAESVKKSFAEKFISQDGLYDYINWDNIPDKSIRPNQIFSISLPF
PIIDDKSIASKILTLIESKLLRQYGLSSLSREDPNYKPVYKGDRRSRESLPQWTHMALVTRRLC

Specific function: Unknown

COG id: COG3408

COG function: function code G; Glycogen debranching enzyme

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 63755; Mature: 63755

Theoretical pI: Translated: 7.62; Mature: 7.62

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIPLDQCEEEWLLPTRTGGYASSTICGINARTYHGYLIVPLNQPHHRFLILSKFEDFLLI
CCCCCCCCHHCCCCCCCCCCCCCEEEECCCEEECCEEEEECCCCCCEEEEEECCCCEEEE
NGDTYSMSTNYYPGSYYPDGYKYLIKVEKNSNSKITWHYDFGYSQVEKTLRVHKGYNAIT
CCCEEEEECCCCCCCCCCCCEEEEEEEEECCCCEEEEEECCCHHHHHHHHHHHCCCCEEE
ITYIATRGKFKLCPFITFRSHHLAKKLQNEFFTYEIYPPNTIYILYEGKRILNFEIHDKY
EEEEEECCCEEEEEEEEEHHHHHHHHHHCCCEEEEEECCCEEEEEEECCEEEEEEECCCH
ELFNSGYWYYNFIYKLDQELGNNYIEDLYNPFCIVSTSNKISVTVYYDQRPKDLSVEENE
HHHCCCCEEEHHHHHHHHHHCCHHHHHHCCCEEEEECCCEEEEEEEECCCCCCCCCCCCC
HYDILKLLSAAGKDFVVKGKDGWAIIAGYHWFDEWGRDTFISLEGLLLVDKQYDIAKEII
CHHHHHHHHHCCCCEEEECCCCCEEEEEEEEHHHCCCCEEEEEEEEEEEECCHHHHHHHH
LKYLNLEKRGMLPNNFISYNGEPVYRGVDISLWAINAIYKTYIYSRDKNFIRKVVDKVLD
HHHHCCHHCCCCCCCCCCCCCCEEEECCEEEEEEHHHHHHHHHHCCCHHHHHHHHHHHHH
IIDWYSKGNGVIYNVDNLIFHKGAPRTWMDASYDSRIVTPREGAAVEINALWYNALRVTE
HHHHHCCCCCEEEECCCEEEECCCCCCCCCCCCCCEEECCCCCCEEEEEEEEHHHHHHHH
FLLNELGEKAEYLSEKAESVKKSFAEKFISQDGLYDYINWDNIPDKSIRPNQIFSISLPF
HHHHHHCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCCCCCCCCEEEEEECCC
PIIDDKSIASKILTLIESKLLRQYGLSSLSREDPNYKPVYKGDRRSRESLPQWTHMALVT
CCCCCHHHHHHHHHHHHHHHHHHHCCHHHCCCCCCCCCCCCCCCCCHHCCCHHHHHHHHH
RRLC
HHCC
>Mature Secondary Structure
MIPLDQCEEEWLLPTRTGGYASSTICGINARTYHGYLIVPLNQPHHRFLILSKFEDFLLI
CCCCCCCCHHCCCCCCCCCCCCCEEEECCCEEECCEEEEECCCCCCEEEEEECCCCEEEE
NGDTYSMSTNYYPGSYYPDGYKYLIKVEKNSNSKITWHYDFGYSQVEKTLRVHKGYNAIT
CCCEEEEECCCCCCCCCCCCEEEEEEEEECCCCEEEEEECCCHHHHHHHHHHHCCCCEEE
ITYIATRGKFKLCPFITFRSHHLAKKLQNEFFTYEIYPPNTIYILYEGKRILNFEIHDKY
EEEEEECCCEEEEEEEEEHHHHHHHHHHCCCEEEEEECCCEEEEEEECCEEEEEEECCCH
ELFNSGYWYYNFIYKLDQELGNNYIEDLYNPFCIVSTSNKISVTVYYDQRPKDLSVEENE
HHHCCCCEEEHHHHHHHHHHCCHHHHHHCCCEEEEECCCEEEEEEEECCCCCCCCCCCCC
HYDILKLLSAAGKDFVVKGKDGWAIIAGYHWFDEWGRDTFISLEGLLLVDKQYDIAKEII
CHHHHHHHHHCCCCEEEECCCCCEEEEEEEEHHHCCCCEEEEEEEEEEEECCHHHHHHHH
LKYLNLEKRGMLPNNFISYNGEPVYRGVDISLWAINAIYKTYIYSRDKNFIRKVVDKVLD
HHHHCCHHCCCCCCCCCCCCCCEEEECCEEEEEEHHHHHHHHHHCCCHHHHHHHHHHHHH
IIDWYSKGNGVIYNVDNLIFHKGAPRTWMDASYDSRIVTPREGAAVEINALWYNALRVTE
HHHHHCCCCCEEEECCCEEEECCCCCCCCCCCCCCEEECCCCCCEEEEEEEEHHHHHHHH
FLLNELGEKAEYLSEKAESVKKSFAEKFISQDGLYDYINWDNIPDKSIRPNQIFSISLPF
HHHHHHCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCCCCCCCCEEEEEECCC
PIIDDKSIASKILTLIESKLLRQYGLSSLSREDPNYKPVYKGDRRSRESLPQWTHMALVT
CCCCCHHHHHHHHHHHHHHHHHHHCCHHHCCCCCCCCCCCCCCCCCHHCCCHHHHHHHHH
RRLC
HHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA