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The map label for this gene is ydaO [C]

Identifier: 15897505

GI number: 15897505

Start: 514553

End: 515524

Strand: Direct

Name: ydaO [C]

Synonym: SSO0586

Alternate gene names: 15897505

Gene position: 514553-515524 (Clockwise)

Preceding gene: 15897504

Following gene: 15897507

Centisome position: 17.2

GC content: 35.08

Gene sequence:

>972_bases
ATGATTTGTGATAATTGTAAGACGCGAGAAGCGGTAATTCTACAACCACATACTGGAAGAAAATTATGTAAAGAATGTTT
TATAGAAGACATTAGAAAAAGGGTTGAAATGGAGGCTAGAAAGCAGGAGATAGTAAATTCCAATAAAATACTTTTAGCGG
TCTCAGGCGGAAAGGATAGCTTAGTATTAGCTGATACCTTGTCTCAATTTATACATCCATCTAGACTAATAGCATTCAAT
ATAAATGAGGGTATAAAGGGATACAATAGAAATGAATACGTGAAGAAGCTAGAAGAGTATCTGAAAGATCTAGGGATTGA
ACTAATAAAAAGTGGATTTAAAGAGGAAGTTGGATTTTCTTTAGATGAGATGCTAGAAGCTTCGTTAAAGAAAAAGCTTA
ATGTATCCGCTTGTACATTTTGTGGAGGATTCAGAAGGAAGTTAATTAATGAAGCTGGAATTAAAGTAGCCGCAGATTAC
GTGGCAACTGGACATAATTTAGACGATGAGGTACAAACTATAGTTATAAATTTGATAAGAGGTGACTTGTTAAGACTAAT
AAGGTTCGGGGATAAGCCATTAATGGTAAGTAGTAAGTTCGTAATGAGAGTTAAACCGTTGAGAAAAATCTATGAATGGG
AGACAACGATGTATGCACATCTCAAAGGCTTCGAGTTTCAAGAAACCGAATGCCCATATATTTCTCAAAAGCCAACTCTA
AGGGCTAAGGTAAGGGACCTATTGTACAAACTAGAGGAGAAGAAACCAGGGACATTACTTAGAATACTAGAACAGTTTGA
TGAGATTTCAGAGAAAATCAAAAAAGAGTATAGACTCACTAACGAATTACCTAATTGTGTAATTTGTGGAGAGCCCACCA
CACCAGGGAGAATGATATGTAAGAATTGTGAATTACTAATTAGATCTGGGTTAATGCCTCAAGAATATCAAAAATACTTA
CCTATATCGTAG

Upstream 100 bases:

>100_bases
TTTGATGATATAAGAAAAATGCTAGAAGAAGAGGGATGTGCAATCCATAGCATTGATGAAGTAGTAAGTGGTAATAGAAT
AATTGAGGGAAAGATAAAGG

Downstream 100 bases:

>100_bases
ATTCTCTCCTTTACGTTTTTCCTCTTATTTGCTACTATAGCCATTGAGAATAATAAAGAAGATAATCTGTTCAGATAAAC
TATTATCCATTTGTTGAAAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 323; Mature: 323

Protein sequence:

>323_residues
MICDNCKTREAVILQPHTGRKLCKECFIEDIRKRVEMEARKQEIVNSNKILLAVSGGKDSLVLADTLSQFIHPSRLIAFN
INEGIKGYNRNEYVKKLEEYLKDLGIELIKSGFKEEVGFSLDEMLEASLKKKLNVSACTFCGGFRRKLINEAGIKVAADY
VATGHNLDDEVQTIVINLIRGDLLRLIRFGDKPLMVSSKFVMRVKPLRKIYEWETTMYAHLKGFEFQETECPYISQKPTL
RAKVRDLLYKLEEKKPGTLLRILEQFDEISEKIKKEYRLTNELPNCVICGEPTTPGRMICKNCELLIRSGLMPQEYQKYL
PIS

Sequences:

>Translated_323_residues
MICDNCKTREAVILQPHTGRKLCKECFIEDIRKRVEMEARKQEIVNSNKILLAVSGGKDSLVLADTLSQFIHPSRLIAFN
INEGIKGYNRNEYVKKLEEYLKDLGIELIKSGFKEEVGFSLDEMLEASLKKKLNVSACTFCGGFRRKLINEAGIKVAADY
VATGHNLDDEVQTIVINLIRGDLLRLIRFGDKPLMVSSKFVMRVKPLRKIYEWETTMYAHLKGFEFQETECPYISQKPTL
RAKVRDLLYKLEEKKPGTLLRILEQFDEISEKIKKEYRLTNELPNCVICGEPTTPGRMICKNCELLIRSGLMPQEYQKYL
PIS
>Mature_323_residues
MICDNCKTREAVILQPHTGRKLCKECFIEDIRKRVEMEARKQEIVNSNKILLAVSGGKDSLVLADTLSQFIHPSRLIAFN
INEGIKGYNRNEYVKKLEEYLKDLGIELIKSGFKEEVGFSLDEMLEASLKKKLNVSACTFCGGFRRKLINEAGIKVAADY
VATGHNLDDEVQTIVINLIRGDLLRLIRFGDKPLMVSSKFVMRVKPLRKIYEWETTMYAHLKGFEFQETECPYISQKPTL
RAKVRDLLYKLEEKKPGTLLRILEQFDEISEKIKKEYRLTNELPNCVICGEPTTPGRMICKNCELLIRSGLMPQEYQKYL
PIS

Specific function: Unknown

COG id: COG0037

COG function: function code D; Predicted ATPase of the PP-loop superfamily implicated in cell cycle control

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the TtcA family [H]

Homologues:

Organism=Homo sapiens, GI222537719, Length=310, Percent_Identity=27.741935483871, Blast_Score=129, Evalue=3e-30,
Organism=Escherichia coli, GI1787606, Length=224, Percent_Identity=25.8928571428571, Blast_Score=65, Evalue=4e-12,
Organism=Caenorhabditis elegans, GI17540090, Length=314, Percent_Identity=30.8917197452229, Blast_Score=126, Evalue=1e-29,
Organism=Saccharomyces cerevisiae, GI6321227, Length=165, Percent_Identity=29.0909090909091, Blast_Score=74, Evalue=4e-14,
Organism=Drosophila melanogaster, GI24651972, Length=313, Percent_Identity=31.3099041533546, Blast_Score=143, Evalue=2e-34,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012089
- InterPro:   IPR014729
- InterPro:   IPR011063
- InterPro:   IPR000541
- InterPro:   IPR020554 [H]

Pfam domain/function: PF01171 ATP_bind_3 [H]

EC number: NA

Molecular weight: Translated: 37166; Mature: 37166

Theoretical pI: Translated: 8.71; Mature: 8.71

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.4 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
5.9 %Cys+Met (Translated Protein)
3.4 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
5.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MICDNCKTREAVILQPHTGRKLCKECFIEDIRKRVEMEARKQEIVNSNKILLAVSGGKDS
CCCCCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCC
LVLADTLSQFIHPSRLIAFNINEGIKGYNRNEYVKKLEEYLKDLGIELIKSGFKEEVGFS
EEHHHHHHHHCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
LDEMLEASLKKKLNVSACTFCGGFRRKLINEAGIKVAADYVATGHNLDDEVQTIVINLIR
HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCEEHHHHHCCCCCCHHHHHHHHHHHH
GDLLRLIRFGDKPLMVSSKFVMRVKPLRKIYEWETTMYAHLKGFEFQETECPYISQKPTL
HHHHHHHHCCCCCEEECHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHH
RAKVRDLLYKLEEKKPGTLLRILEQFDEISEKIKKEYRLTNELPNCVICGEPTTPGRMIC
HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCHHHHH
KNCELLIRSGLMPQEYQKYLPIS
HHHHHHHHCCCCHHHHHHCCCCC
>Mature Secondary Structure
MICDNCKTREAVILQPHTGRKLCKECFIEDIRKRVEMEARKQEIVNSNKILLAVSGGKDS
CCCCCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCC
LVLADTLSQFIHPSRLIAFNINEGIKGYNRNEYVKKLEEYLKDLGIELIKSGFKEEVGFS
EEHHHHHHHHCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
LDEMLEASLKKKLNVSACTFCGGFRRKLINEAGIKVAADYVATGHNLDDEVQTIVINLIR
HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCEEHHHHHCCCCCCHHHHHHHHHHHH
GDLLRLIRFGDKPLMVSSKFVMRVKPLRKIYEWETTMYAHLKGFEFQETECPYISQKPTL
HHHHHHHHCCCCCEEECHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHH
RAKVRDLLYKLEEKKPGTLLRILEQFDEISEKIKKEYRLTNELPNCVICGEPTTPGRMIC
HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCHHHHH
KNCELLIRSGLMPQEYQKYLPIS
HHHHHHHHCCCCHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]