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The map label for this gene is pdxT [H]

Identifier: 15897492

GI number: 15897492

Start: 503620

End: 504222

Strand: Direct

Name: pdxT [H]

Synonym: SSO0571

Alternate gene names: 15897492

Gene position: 503620-504222 (Clockwise)

Preceding gene: 15897491

Following gene: 15897493

Centisome position: 16.83

GC content: 35.32

Gene sequence:

>603_bases
ATGAAAATAGGTATAATAGCTTATCAAGGGAGTTTCGAAGAACATTTTCTTCAGTTAAAGAGGGCTTTTGATAAACTATC
ATTAAATGGCGAGATTATTTCAATAAAGATTCCTAAAGATCTAAAGGGTGTGGACGGAGTAATAATACCGGGAGGGGAAA
GCACTACAATAGGATTAGTAGCTAAAAGGCTAGGGCTATTAGATGAACTGAAAGAGAAAATTACATCTGGTTTACCAGTC
TTAGGAACGTGTGCTGGTGCTATAATGTTAGCAAAGGAAGTAAGTGATGCCAAAGTAGGTAAAACCTCACAACCATTAAT
AGGAACAATGAATATTAGTGTGATTAGAAATTATTATGGAAGACAAAAGGAAAGTTTTGAAGCTATAGTTGATCTATCTA
AAATAGGTAAGGATAAAGCTCATGTGGTATTCATTAGAGCTCCAGCAATAGCGAAAGTATGGGGAAAGGCTCAAAGCTTA
GCTGAGTTAAATGGTGTAACAGTTTTCGCTGAAGAAAATAATATGCTTGCTACTACATTTCACCCCGAATTATCTGATAC
AACTTCGATACACGAATATTTCCTACATCTAGTTAAAGGGTAA

Upstream 100 bases:

>100_bases
TCGTATTGGAAGCTCAGAAAATGATAAGCGAACAGAAAAGTATGATGGGAATTGATATAAAATCTCTAAAACCGGAAGAA
TTACTACAAGTGAGAGGGCT

Downstream 100 bases:

>100_bases
TCTTTTATTTTTATATAATATATACCTCGATTGAAAAGTGGGGATAAGGATTTTGAATGATCTGATGTTAGATAAAAGTG
CGTTATTATTTGGGGTCTCG

Product: glutamine amidotransferase subunit PdxT

Products: NA

Alternate protein names: Glutamine amidotransferase glutaminase subunit pdxT [H]

Number of amino acids: Translated: 200; Mature: 200

Protein sequence:

>200_residues
MKIGIIAYQGSFEEHFLQLKRAFDKLSLNGEIISIKIPKDLKGVDGVIIPGGESTTIGLVAKRLGLLDELKEKITSGLPV
LGTCAGAIMLAKEVSDAKVGKTSQPLIGTMNISVIRNYYGRQKESFEAIVDLSKIGKDKAHVVFIRAPAIAKVWGKAQSL
AELNGVTVFAEENNMLATTFHPELSDTTSIHEYFLHLVKG

Sequences:

>Translated_200_residues
MKIGIIAYQGSFEEHFLQLKRAFDKLSLNGEIISIKIPKDLKGVDGVIIPGGESTTIGLVAKRLGLLDELKEKITSGLPV
LGTCAGAIMLAKEVSDAKVGKTSQPLIGTMNISVIRNYYGRQKESFEAIVDLSKIGKDKAHVVFIRAPAIAKVWGKAQSL
AELNGVTVFAEENNMLATTFHPELSDTTSIHEYFLHLVKG
>Mature_200_residues
MKIGIIAYQGSFEEHFLQLKRAFDKLSLNGEIISIKIPKDLKGVDGVIIPGGESTTIGLVAKRLGLLDELKEKITSGLPV
LGTCAGAIMLAKEVSDAKVGKTSQPLIGTMNISVIRNYYGRQKESFEAIVDLSKIGKDKAHVVFIRAPAIAKVWGKAQSL
AELNGVTVFAEENNMLATTFHPELSDTTSIHEYFLHLVKG

Specific function: Involved in the hydrolysis of glutamine to glutamate and ammonia. Channels an ammonia molecule to pdxS [H]

COG id: COG0311

COG function: function code H; Predicted glutamine amidotransferase involved in pyridoxine biosynthesis

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glutamine amidotransferase pdxT/SNO family [H]

Homologues:

Organism=Saccharomyces cerevisiae, GI6323742, Length=207, Percent_Identity=40.5797101449275, Blast_Score=128, Evalue=6e-31,
Organism=Saccharomyces cerevisiae, GI6321048, Length=212, Percent_Identity=33.4905660377358, Blast_Score=106, Evalue=2e-24,
Organism=Saccharomyces cerevisiae, GI6323995, Length=214, Percent_Identity=32.7102803738318, Blast_Score=105, Evalue=4e-24,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002161
- InterPro:   IPR021196 [H]

Pfam domain/function: PF01174 SNO [H]

EC number: NA

Molecular weight: Translated: 21694; Mature: 21694

Theoretical pI: Translated: 8.98; Mature: 8.98

Prosite motif: PS51130 PDXT_SNO_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKIGIIAYQGSFEEHFLQLKRAFDKLSLNGEIISIKIPKDLKGVDGVIIPGGESTTIGLV
CEEEEEEECCCHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCEEEECCCCCCHHHHH
AKRLGLLDELKEKITSGLPVLGTCAGAIMLAKEVSDAKVGKTSQPLIGTMNISVIRNYYG
HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEHHHHHHHHHC
RQKESFEAIVDLSKIGKDKAHVVFIRAPAIAKVWGKAQSLAELNGVTVFAEENNMLATTF
CCHHHHHHHHHHHHCCCCCEEEEEEECCHHHHHHHHHHHHHHHCCEEEEEECCCEEEEEE
HPELSDTTSIHEYFLHLVKG
CCCCCCHHHHHHHHHHHHCC
>Mature Secondary Structure
MKIGIIAYQGSFEEHFLQLKRAFDKLSLNGEIISIKIPKDLKGVDGVIIPGGESTTIGLV
CEEEEEEECCCHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCEEEECCCCCCHHHHH
AKRLGLLDELKEKITSGLPVLGTCAGAIMLAKEVSDAKVGKTSQPLIGTMNISVIRNYYG
HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEHHHHHHHHHC
RQKESFEAIVDLSKIGKDKAHVVFIRAPAIAKVWGKAQSLAELNGVTVFAEENNMLATTF
CCHHHHHHHHHHHHCCCCCEEEEEEECCHHHHHHHHHHHHHHHCCEEEEEECCCEEEEEE
HPELSDTTSIHEYFLHLVKG
CCCCCCHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA