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The map label for this gene is 15897473

Identifier: 15897473

GI number: 15897473

Start: 484290

End: 484916

Strand: Reverse

Name: 15897473

Synonym: SSO0551

Alternate gene names: NA

Gene position: 484916-484290 (Counterclockwise)

Preceding gene: 15897475

Following gene: 15897471

Centisome position: 16.21

GC content: 33.65

Gene sequence:

>627_bases
ATGAAGCCCAAACCCCTAAAATGTATAACGTCTCACCATTATATAATAAAATTTTATGATAAAAGCAACTTACGAACCTC
GTTATATTTATTAATATTCAAGGAACATAAAGATTATAGAGAGCAAATGAAGGTATATATTATAGACTACCATAAGGATG
ATCCAAAGAGATGTACTGGGAAGAAGTTAGTCAAACTAAAAATTGCAGAATTTACTAGAGTAGGTAAAGGTGTAGTTCTT
GACCCTTTCGCTCAAATAACTCTGTCAAACAAGGATAAAGATATTGTGAGGAGAATTGGCATAACTATAGTTGATACTTC
ATGGAATAATACGTCCCAAAGCGAGTTTAAAAATATAAGAGGGGAACATAGAAGAATTCCAATCTTATTTGCCGGGAACC
CAATACATTACGGTATAGCCTATAAACTGTCTTCTATTGAGGCGTTAATAGCTACGTTGTACATTGTTGATGAGGTGGAA
GAGGCTATAAAGCTTTCCAACGTAGTTAAGTGGGGACATACATTCATAGAACTGAATAAGGAGCTTCTGGAAGCTTATAA
AAACAAAACCGAGGAAGATATAAAGAAAATCGAGCGAGAAATTATTGAGAAAATACTTGAAAAATGA

Upstream 100 bases:

>100_bases
GGGTTGGGGTTATCCCGCTAATGGGGCGGAGAGGGATGAACGTCCGCGACTTCGGTGAAGCCCAAGGGCTGAGGATTGAT
ATTAAATATCATGAAATCCC

Downstream 100 bases:

>100_bases
GTATATGAACACTGAATTTCAACTTAGATCTCTCGCTTTAGAAAAGAGTTCAAAGCTACGTAAGTTCACGTTAGATACCA
ATTATATGAGATAGTATACA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 208; Mature: 208

Protein sequence:

>208_residues
MKPKPLKCITSHHYIIKFYDKSNLRTSLYLLIFKEHKDYREQMKVYIIDYHKDDPKRCTGKKLVKLKIAEFTRVGKGVVL
DPFAQITLSNKDKDIVRRIGITIVDTSWNNTSQSEFKNIRGEHRRIPILFAGNPIHYGIAYKLSSIEALIATLYIVDEVE
EAIKLSNVVKWGHTFIELNKELLEAYKNKTEEDIKKIEREIIEKILEK

Sequences:

>Translated_208_residues
MKPKPLKCITSHHYIIKFYDKSNLRTSLYLLIFKEHKDYREQMKVYIIDYHKDDPKRCTGKKLVKLKIAEFTRVGKGVVL
DPFAQITLSNKDKDIVRRIGITIVDTSWNNTSQSEFKNIRGEHRRIPILFAGNPIHYGIAYKLSSIEALIATLYIVDEVE
EAIKLSNVVKWGHTFIELNKELLEAYKNKTEEDIKKIEREIIEKILEK
>Mature_208_residues
MKPKPLKCITSHHYIIKFYDKSNLRTSLYLLIFKEHKDYREQMKVYIIDYHKDDPKRCTGKKLVKLKIAEFTRVGKGVVL
DPFAQITLSNKDKDIVRRIGITIVDTSWNNTSQSEFKNIRGEHRRIPILFAGNPIHYGIAYKLSSIEALIATLYIVDEVE
EAIKLSNVVKWGHTFIELNKELLEAYKNKTEEDIKKIEREIIEKILEK

Specific function: Unknown

COG id: COG2042

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0293 family [H]

Homologues:

Organism=Homo sapiens, GI47777330, Length=159, Percent_Identity=36.4779874213836, Blast_Score=118, Evalue=4e-27,
Organism=Caenorhabditis elegans, GI25148466, Length=172, Percent_Identity=35.4651162790698, Blast_Score=120, Evalue=4e-28,
Organism=Saccharomyces cerevisiae, GI6324579, Length=168, Percent_Identity=37.5, Blast_Score=118, Evalue=6e-28,
Organism=Drosophila melanogaster, GI24647066, Length=168, Percent_Identity=39.8809523809524, Blast_Score=135, Evalue=2e-32,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007177
- InterPro:   IPR007209
- InterPro:   IPR022968
- ProDom:   PD016638 [H]

Pfam domain/function: PF04034 DUF367; PF04068 RLI [H]

EC number: NA

Molecular weight: Translated: 24407; Mature: 24407

Theoretical pI: Translated: 9.82; Mature: 9.82

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKPKPLKCITSHHYIIKFYDKSNLRTSLYLLIFKEHKDYREQMKVYIIDYHKDDPKRCTG
CCCCCCEEECCCEEEEEEEECCCCCEEEEEEEECCCHHHHHCEEEEEEEECCCCCCCCCC
KKLVKLKIAEFTRVGKGVVLDPFAQITLSNKDKDIVRRIGITIVDTSWNNTSQSEFKNIR
CCEEEEEHHHHHHCCCCCEECCCEEEEECCCCHHHHHHCCCEEEECCCCCCCHHHHHHCC
GEHRRIPILFAGNPIHYGIAYKLSSIEALIATLYIVDEVEEAIKLSNVVKWGHTFIELNK
CCCCEEEEEEECCCEEEEHEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ELLEAYKNKTEEDIKKIEREIIEKILEK
HHHHHHHCCCHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MKPKPLKCITSHHYIIKFYDKSNLRTSLYLLIFKEHKDYREQMKVYIIDYHKDDPKRCTG
CCCCCCEEECCCEEEEEEEECCCCCEEEEEEEECCCHHHHHCEEEEEEEECCCCCCCCCC
KKLVKLKIAEFTRVGKGVVLDPFAQITLSNKDKDIVRRIGITIVDTSWNNTSQSEFKNIR
CCEEEEEHHHHHHCCCCCEECCCEEEEECCCCHHHHHHCCCEEEECCCCCCCHHHHHHCC
GEHRRIPILFAGNPIHYGIAYKLSSIEALIATLYIVDEVEEAIKLSNVVKWGHTFIELNK
CCCCEEEEEEECCCEEEEHEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ELLEAYKNKTEEDIKKIEREIIEKILEK
HHHHHHHCCCHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10701121; 11427726 [H]