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The map label for this gene is 15897472

Identifier: 15897472

GI number: 15897472

Start: 482449

End: 483393

Strand: Direct

Name: 15897472

Synonym: SSO0550

Alternate gene names: NA

Gene position: 482449-483393 (Clockwise)

Preceding gene: 15897470

Following gene: 15897474

Centisome position: 16.12

GC content: 34.71

Gene sequence:

>945_bases
ATGCGGATGAGTTTACGTATTGCCATATTATTATTTTTATTATTTTTAGCATTTAGCCTAGGCTTTGTAATTCAGTACTT
CTTGCAAGTTTTTGGGATAACTAACCAGTCTACTATCAACTCTGTGATTTTCTATCTTAGGATAGCTCTATACGTATTTA
TTGGCTTATGGATAGTATCTTCAATATCAGAGGCCATAAGGGTCTATTCTCAAAGGAGACTTGGTATAAGGGCTAATGTA
ATTGCAAATAGCGTAAGGTACTTTGGGTATGTAATTGTTTTTCTATTAGTGCTGTTACCCTTAGGAGTTGGCTCTTCTAC
GCTTATTGCAGGAAGCACTTTTGCAGGCTTAATTATAGGTCTTGCTTTACAACCGGTCCTAAGTAACTTCTTTGCCGGTC
TACTGATAATGCTCACTGGATATATAGTAGTTGGGGACAAAATAAGGGTTCTTTCCACACAAGTACCATTCTTCCCTGCG
CAATTTCCAGCATATAAATATTTTTCAACGGACTTTATAGAACAAGGATATAAAGGTACAGTAGTGGAAATAGATTTGTT
TTATTCTAGAGTTCTTCTAGAGAATTTAAGGGAATTAAGAGTGCCAAATATTGTATTGCTGAACTCAGCAGTTTTGGACT
ATACTTCAAAGTACTCTGAGGAACATGTGATCAATGTGAGAGTGGAGTTTCCATTAGCTTTTATAGACATCAACAAGTTA
GAAGATATAGTCAAAGAGGAATTAAAAGACTTTAATGTAGTAGAAGGACCTTATATAAATGAACAAAGCGATAAAGACCA
CGTAATAGTATTGGCTAGATTAAAAGTTGGTGTTAGTGAAGATTGGAGGAAAATAAAGTCTAATGCACTAAAAAGGTTAT
TAAGACTAAGACAAGAGCTTATAGATAAGAAGAGCCAAGATTCGCAACAAACAAAGATCTCATAA

Upstream 100 bases:

>100_bases
ACACCACTGTGTGGCGCCCTCAAATTATAGATAACGCCAGATGATATAAACTTTTAAGCTTATTAGAAACTGCTGACTAA
GGGAAGAGTAGTAGATAGAG

Downstream 100 bases:

>100_bases
CCGCACACATTAGTTTTTCAAATAAACTGTAAAGTTCATATAAATTTGTCACAGATAAATTTTTGGATGAGACAATACCA
GATGTGATGTTATATCACGG

Product: hypothetical protein

Products: NA

Alternate protein names: Small-Conductance Mechanosensitive Channel Protein; Mechanosensitive Ion Channel

Number of amino acids: Translated: 314; Mature: 314

Protein sequence:

>314_residues
MRMSLRIAILLFLLFLAFSLGFVIQYFLQVFGITNQSTINSVIFYLRIALYVFIGLWIVSSISEAIRVYSQRRLGIRANV
IANSVRYFGYVIVFLLVLLPLGVGSSTLIAGSTFAGLIIGLALQPVLSNFFAGLLIMLTGYIVVGDKIRVLSTQVPFFPA
QFPAYKYFSTDFIEQGYKGTVVEIDLFYSRVLLENLRELRVPNIVLLNSAVLDYTSKYSEEHVINVRVEFPLAFIDINKL
EDIVKEELKDFNVVEGPYINEQSDKDHVIVLARLKVGVSEDWRKIKSNALKRLLRLRQELIDKKSQDSQQTKIS

Sequences:

>Translated_314_residues
MRMSLRIAILLFLLFLAFSLGFVIQYFLQVFGITNQSTINSVIFYLRIALYVFIGLWIVSSISEAIRVYSQRRLGIRANV
IANSVRYFGYVIVFLLVLLPLGVGSSTLIAGSTFAGLIIGLALQPVLSNFFAGLLIMLTGYIVVGDKIRVLSTQVPFFPA
QFPAYKYFSTDFIEQGYKGTVVEIDLFYSRVLLENLRELRVPNIVLLNSAVLDYTSKYSEEHVINVRVEFPLAFIDINKL
EDIVKEELKDFNVVEGPYINEQSDKDHVIVLARLKVGVSEDWRKIKSNALKRLLRLRQELIDKKSQDSQQTKIS
>Mature_314_residues
MRMSLRIAILLFLLFLAFSLGFVIQYFLQVFGITNQSTINSVIFYLRIALYVFIGLWIVSSISEAIRVYSQRRLGIRANV
IANSVRYFGYVIVFLLVLLPLGVGSSTLIAGSTFAGLIIGLALQPVLSNFFAGLLIMLTGYIVVGDKIRVLSTQVPFFPA
QFPAYKYFSTDFIEQGYKGTVVEIDLFYSRVLLENLRELRVPNIVLLNSAVLDYTSKYSEEHVINVRVEFPLAFIDINKL
EDIVKEELKDFNVVEGPYINEQSDKDHVIVLARLKVGVSEDWRKIKSNALKRLLRLRQELIDKKSQDSQQTKIS

Specific function: Unknown

COG id: COG0668

COG function: function code M; Small-conductance mechanosensitive channel

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 35726; Mature: 35726

Theoretical pI: Translated: 9.70; Mature: 9.70

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRMSLRIAILLFLLFLAFSLGFVIQYFLQVFGITNQSTINSVIFYLRIALYVFIGLWIVS
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
SISEAIRVYSQRRLGIRANVIANSVRYFGYVIVFLLVLLPLGVGSSTLIAGSTFAGLIIG
HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEECCHHHHHHHHH
LALQPVLSNFFAGLLIMLTGYIVVGDKIRVLSTQVPFFPAQFPAYKYFSTDFIEQGYKGT
HHHHHHHHHHHHHHHHHHHHHHEECCEEEEEECCCCCCCCCCCCHHHHHHHHHHCCCCCC
VVEIDLFYSRVLLENLRELRVPNIVLLNSAVLDYTSKYSEEHVINVRVEFPLAFIDINKL
EEEHHHHHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHCCCCCEEEEEEECCEEEEEHHHH
EDIVKEELKDFNVVEGPYINEQSDKDHVIVLARLKVGVSEDWRKIKSNALKRLLRLRQEL
HHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHH
IDKKSQDSQQTKIS
HCCCCCCCHHCCCC
>Mature Secondary Structure
MRMSLRIAILLFLLFLAFSLGFVIQYFLQVFGITNQSTINSVIFYLRIALYVFIGLWIVS
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
SISEAIRVYSQRRLGIRANVIANSVRYFGYVIVFLLVLLPLGVGSSTLIAGSTFAGLIIG
HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEECCHHHHHHHHH
LALQPVLSNFFAGLLIMLTGYIVVGDKIRVLSTQVPFFPAQFPAYKYFSTDFIEQGYKGT
HHHHHHHHHHHHHHHHHHHHHHEECCEEEEEECCCCCCCCCCCCHHHHHHHHHHCCCCCC
VVEIDLFYSRVLLENLRELRVPNIVLLNSAVLDYTSKYSEEHVINVRVEFPLAFIDINKL
EEEHHHHHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHCCCCCEEEEEEECCEEEEEHHHH
EDIVKEELKDFNVVEGPYINEQSDKDHVIVLARLKVGVSEDWRKIKSNALKRLLRLRQEL
HHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHH
IDKKSQDSQQTKIS
HCCCCCCCHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA