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The map label for this gene is pcnA-like

Identifier: 15897331

GI number: 15897331

Start: 348688

End: 349437

Strand: Direct

Name: pcnA-like

Synonym: SSO0397

Alternate gene names: 15897331

Gene position: 348688-349437 (Clockwise)

Preceding gene: 15897330

Following gene: 15897337

Centisome position: 11.65

GC content: 36.27

Gene sequence:

>750_bases
ATGTTTAAGATTGTTTACCCTAATGCAAAAGACTTTTTCTCTTTTATAAATTCCATTACGAACGTTACTGATTCCATTAT
TCTAAATTTCACTGAAGATGGAATATTTTCGAGACATTTGACTGAAGATAAAGTGCTAATGGCGATTATGAGAATACCTA
AAGATGTTTTAAGCGAATATAGTATTGATAGCCCTACTTCAGTTAAATTGGATGTCTCTTCAGTAAAGAAGATTCTTTCA
AAAGCCAGCTCAAAGAAAGCTACGATCGAGTTGACAGAGACTGATAGTGGATTAAAGATTATAATAAGAGATGAGAAGAG
TGGGGCGAAAAGTACAATTTATATTAAAGCAGAGAAAGGTCAAGTTGAACAACTAACTGAACCGAAAGTTAATTTGGCCG
TGAATTTCACTACAGATGAAAGTGTACTTAATGTAATAGCAGCTGACGTAACTTTGGTTGGAGAAGAGATGAGGATTTCA
ACAGAGGAGGATAAGATAAAGATAGAGGCTGGTGAGGAGGGGAAAAGATATGTCGCATTTCTTATGAAGGATAAACCCCT
AAAGGAACTTTCTATAGATACATCGGCATCATCTTCTTATAGCGCGGAAATGTTTAAGGATGCTGTAAAAGGTCTAAGAG
GTTTTTCGGCCCCAACAATGGTAAGCTTTGGAGAAAATCTCCCTATGAAAATTGACGTAGAAGCAGTAAGTGGGGGTCAT
ATGATCTTTTGGATAGCGCCAAGGTTATAA

Upstream 100 bases:

>100_bases
GAATATGAAAAGAGGGATTCTAGGAGGAAAGCTAAAAAGGCTGTTAGTAAAAAAGTTAAAAAGACAAAGAAAAAAGAGAA
GAGCGTAGAGGGTTAAAATT

Downstream 100 bases:

>100_bases
ATTATTTTATTACCTCTTTTTATAATTCCAATATATTTATTATTTGAGTTTAATATGCCCGTGCTATCTCCCTCAAGGAC
TAGTAACCCAGCTTCAATAG

Product: proliferating cell nuclear antigen

Products: NA

Alternate protein names: Proliferating cell nuclear antigen homolog B; PCNA B

Number of amino acids: Translated: 249; Mature: 249

Protein sequence:

>249_residues
MFKIVYPNAKDFFSFINSITNVTDSIILNFTEDGIFSRHLTEDKVLMAIMRIPKDVLSEYSIDSPTSVKLDVSSVKKILS
KASSKKATIELTETDSGLKIIIRDEKSGAKSTIYIKAEKGQVEQLTEPKVNLAVNFTTDESVLNVIAADVTLVGEEMRIS
TEEDKIKIEAGEEGKRYVAFLMKDKPLKELSIDTSASSSYSAEMFKDAVKGLRGFSAPTMVSFGENLPMKIDVEAVSGGH
MIFWIAPRL

Sequences:

>Translated_249_residues
MFKIVYPNAKDFFSFINSITNVTDSIILNFTEDGIFSRHLTEDKVLMAIMRIPKDVLSEYSIDSPTSVKLDVSSVKKILS
KASSKKATIELTETDSGLKIIIRDEKSGAKSTIYIKAEKGQVEQLTEPKVNLAVNFTTDESVLNVIAADVTLVGEEMRIS
TEEDKIKIEAGEEGKRYVAFLMKDKPLKELSIDTSASSSYSAEMFKDAVKGLRGFSAPTMVSFGENLPMKIDVEAVSGGH
MIFWIAPRL
>Mature_249_residues
MFKIVYPNAKDFFSFINSITNVTDSIILNFTEDGIFSRHLTEDKVLMAIMRIPKDVLSEYSIDSPTSVKLDVSSVKKILS
KASSKKATIELTETDSGLKIIIRDEKSGAKSTIYIKAEKGQVEQLTEPKVNLAVNFTTDESVLNVIAADVTLVGEEMRIS
TEEDKIKIEAGEEGKRYVAFLMKDKPLKELSIDTSASSSYSAEMFKDAVKGLRGFSAPTMVSFGENLPMKIDVEAVSGGH
MIFWIAPRL

Specific function: Sliding clamp subunit. Responsible for tethering the catalytic subunit of DNA polymerase to DNA during high-speed replication

COG id: COG0592

COG function: function code L; DNA polymerase sliding clamp subunit (PCNA homolog)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the PCNA family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): PCNA2_SULSO (P57766)

Other databases:

- EMBL:   AE006641
- PIR:   G90183
- RefSeq:   NP_341936.1
- PDB:   2HII
- PDB:   2HIK
- PDB:   2IO4
- PDB:   2IX2
- PDB:   2IZO
- PDB:   2NTI
- PDB:   3FDS
- PDBsum:   2HII
- PDBsum:   2HIK
- PDBsum:   2IO4
- PDBsum:   2IX2
- PDBsum:   2IZO
- PDBsum:   2NTI
- PDBsum:   3FDS
- ProteinModelPortal:   P57766
- SMR:   P57766
- DIP:   DIP-48854N
- GeneID:   1455536
- GenomeReviews:   AE006641_GR
- KEGG:   sso:SSO0397
- NMPDR:   fig|273057.1.peg.359
- HOGENOM:   HBG553703
- OMA:   QLIFWIA
- ProtClustDB:   PRK01115
- BioCyc:   SSOL273057:SSO0397-MONOMER
- HAMAP:   MF_00317
- InterPro:   IPR000730
- InterPro:   IPR022648

Pfam domain/function: PF00705 PCNA_N

EC number: NA

Molecular weight: Translated: 27536; Mature: 27536

Theoretical pI: Translated: 5.07; Mature: 5.07

Prosite motif: PS01251 PCNA_1; PS00293 PCNA_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFKIVYPNAKDFFSFINSITNVTDSIILNFTEDGIFSRHLTEDKVLMAIMRIPKDVLSEY
CEEEECCCHHHHHHHHHHHHCCCCEEEEEECCCCCCHHCCCHHHHHHHHHHCCHHHHHHC
SIDSPTSVKLDVSSVKKILSKASSKKATIELTETDSGLKIIIRDEKSGAKSTIYIKAEKG
CCCCCCEEEEEHHHHHHHHHHCCCCCEEEEEEECCCCCEEEEEECCCCCCEEEEEEECCC
QVEQLTEPKVNLAVNFTTDESVLNVIAADVTLVGEEMRISTEEDKIKIEAGEEGKRYVAF
CHHHHCCCCEEEEEEECCCHHHHHHHHHHHEEECCCEEECCCCCEEEEEECCCCCEEEEE
LMKDKPLKELSIDTSASSSYSAEMFKDAVKGLRGFSAPTMVSFGENLPMKIDVEAVSGGH
EECCCCHHHEECCCCCCCCHHHHHHHHHHHHHCCCCCCCEEECCCCCCEEEEEEEECCCE
MIFWIAPRL
EEEEEECCC
>Mature Secondary Structure
MFKIVYPNAKDFFSFINSITNVTDSIILNFTEDGIFSRHLTEDKVLMAIMRIPKDVLSEY
CEEEECCCHHHHHHHHHHHHCCCCEEEEEECCCCCCHHCCCHHHHHHHHHHCCHHHHHHC
SIDSPTSVKLDVSSVKKILSKASSKKATIELTETDSGLKIIIRDEKSGAKSTIYIKAEKG
CCCCCCEEEEEHHHHHHHHHHCCCCCEEEEEEECCCCCEEEEEECCCCCCEEEEEEECCC
QVEQLTEPKVNLAVNFTTDESVLNVIAADVTLVGEEMRISTEEDKIKIEAGEEGKRYVAF
CHHHHCCCCEEEEEEECCCHHHHHHHHHHHEEECCCEEECCCCCEEEEEECCCCCEEEEE
LMKDKPLKELSIDTSASSSYSAEMFKDAVKGLRGFSAPTMVSFGENLPMKIDVEAVSGGH
EECCCCHHHEECCCCCCCCHHHHHHHHHHHHHCCCCCCCEEECCCCCCEEEEEEEECCCE
MIFWIAPRL
EEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10438605; 11427726