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The map label for this gene is 15897319

Identifier: 15897319

GI number: 15897319

Start: 330962

End: 331702

Strand: Reverse

Name: 15897319

Synonym: SSO0387

Alternate gene names: NA

Gene position: 331702-330962 (Counterclockwise)

Preceding gene: 15897320

Following gene: 15897318

Centisome position: 11.09

GC content: 38.6

Gene sequence:

>741_bases
GTGTTTATAACACTAATGGCAGTTGATGAATTATTTGATTCCTATATAATAGAGACTATTGGTAAGAGAATATCTGGAGA
TATTGTTTGGAGTAAGGATATATCCGGATCTTTAAGGAAGTGGAGGGAAATGTTTAACGTTTCTCAAGGTGAGCTGGCTA
GGGAGATGGGAATTAAGCAATCTGTTATCGCAGATTACGAAAGGGGAAGAAGGCAGGCTGGTAGTGAGTTCATTAAGCGT
TATGTGTCTGCTTTGATTTCAATTGACGCTAGGAGGGGTTATAAGGTTGTTAAAGAGTTGGCTAAGATGTTTGGTATAAA
TTTCCCTTTCATTGTTGATATGAGGGATTTCAATTCTCCTATTTGTATAGATAAGTTGATTAGGGCTGTTGACGGTGTTG
TCGTAAATTCCTTTGTTACTGATAAGAAGGTTTACGGTTACGTTGTTACCGATAGTATTAGGGCTATTCTGAGTTTAAGT
GGTTTAGAGTTTTATCAAGTTTTGAGTATGATGGTGAATAGGGTTGTGGTTTTCACGAGAGTAAGTAGCGGTAGGTCTCC
AATGATAGCTCTTAAGGTTGCCCCAATAAGGCCTCAGGTTGTGGTTTTCCATAGACCGGTTAAGCTAGACCCCTTAGCCT
TAATGTTAAGTGAGGTTGAAGGAATAAACATCATTGTCTCTATGAAACCAACTGAGGAGGATTTAATTAAGGGTTTGAGG
TCTCTCCTTGCAGAATCATAA

Upstream 100 bases:

>100_bases
GTATGGGTCCGCCGGGATTTGAACCCGGGACCACGACGACCCGAACGTCGCATCCTAGTCCAGGCTAGACCACGGACCCC
TATTATTTAAATTATAACGC

Downstream 100 bases:

>100_bases
TTGCCTTTGCTATGTCGCCATTTGCCTTAACTAAGGCCTCTCTGGCGTCTTTTTCGCTTTTACCAGTTTGTTCAGCGACA
AATTTTACATCTTCATCTTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 246; Mature: 246

Protein sequence:

>246_residues
MFITLMAVDELFDSYIIETIGKRISGDIVWSKDISGSLRKWREMFNVSQGELAREMGIKQSVIADYERGRRQAGSEFIKR
YVSALISIDARRGYKVVKELAKMFGINFPFIVDMRDFNSPICIDKLIRAVDGVVVNSFVTDKKVYGYVVTDSIRAILSLS
GLEFYQVLSMMVNRVVVFTRVSSGRSPMIALKVAPIRPQVVVFHRPVKLDPLALMLSEVEGINIIVSMKPTEEDLIKGLR
SLLAES

Sequences:

>Translated_246_residues
MFITLMAVDELFDSYIIETIGKRISGDIVWSKDISGSLRKWREMFNVSQGELAREMGIKQSVIADYERGRRQAGSEFIKR
YVSALISIDARRGYKVVKELAKMFGINFPFIVDMRDFNSPICIDKLIRAVDGVVVNSFVTDKKVYGYVVTDSIRAILSLS
GLEFYQVLSMMVNRVVVFTRVSSGRSPMIALKVAPIRPQVVVFHRPVKLDPLALMLSEVEGINIIVSMKPTEEDLIKGLR
SLLAES
>Mature_246_residues
MFITLMAVDELFDSYIIETIGKRISGDIVWSKDISGSLRKWREMFNVSQGELAREMGIKQSVIADYERGRRQAGSEFIKR
YVSALISIDARRGYKVVKELAKMFGINFPFIVDMRDFNSPICIDKLIRAVDGVVVNSFVTDKKVYGYVVTDSIRAILSLS
GLEFYQVLSMMVNRVVVFTRVSSGRSPMIALKVAPIRPQVVVFHRPVKLDPLALMLSEVEGINIIVSMKPTEEDLIKGLR
SLLAES

Specific function: Unknown

COG id: COG1709

COG function: function code K; Predicted transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH cro/C1-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001387
- InterPro:   IPR017271
- InterPro:   IPR010982 [H]

Pfam domain/function: PF01381 HTH_3 [H]

EC number: NA

Molecular weight: Translated: 27750; Mature: 27750

Theoretical pI: Translated: 9.85; Mature: 9.85

Prosite motif: PS50943 HTH_CROC1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
4.5 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
4.5 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFITLMAVDELFDSYIIETIGKRISGDIVWSKDISGSLRKWREMFNVSQGELAREMGIKQ
CEEEEHHHHHHHHHHHHHHHHHHHCCCEEECCCCCHHHHHHHHHHCCCHHHHHHHHCCHH
SVIADYERGRRQAGSEFIKRYVSALISIDARRGYKVVKELAKMFGINFPFIVDMRDFNSP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCEEEEECCCCCC
ICIDKLIRAVDGVVVNSFVTDKKVYGYVVTDSIRAILSLSGLEFYQVLSMMVNRVVVFTR
HHHHHHHHHHHHHHHHHHHCCCHHEEEEHHHHHHHHHHHCCHHHHHHHHHHHHHHEEEEE
VSSGRSPMIALKVAPIRPQVVVFHRPVKLDPLALMLSEVEGINIIVSMKPTEEDLIKGLR
ECCCCCCEEEEEEECCCCEEEEEECCCCCCHHHHHHHHCCCCEEEEEECCCHHHHHHHHH
SLLAES
HHHCCC
>Mature Secondary Structure
MFITLMAVDELFDSYIIETIGKRISGDIVWSKDISGSLRKWREMFNVSQGELAREMGIKQ
CEEEEHHHHHHHHHHHHHHHHHHHCCCEEECCCCCHHHHHHHHHHCCCHHHHHHHHCCHH
SVIADYERGRRQAGSEFIKRYVSALISIDARRGYKVVKELAKMFGINFPFIVDMRDFNSP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCEEEEECCCCCC
ICIDKLIRAVDGVVVNSFVTDKKVYGYVVTDSIRAILSLSGLEFYQVLSMMVNRVVVFTR
HHHHHHHHHHHHHHHHHHHCCCHHEEEEHHHHHHHHHHHCCHHHHHHHHHHHHHHEEEEE
VSSGRSPMIALKVAPIRPQVVVFHRPVKLDPLALMLSEVEGINIIVSMKPTEEDLIKGLR
ECCCCCCEEEEEEECCCCEEEEEECCCCCCHHHHHHHHCCCCEEEEEECCCHHHHHHHHH
SLLAES
HHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9389475 [H]