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The map label for this gene is rpl39e [H]

Identifier: 15897288

GI number: 15897288

Start: 300522

End: 300683

Strand: Reverse

Name: rpl39e [H]

Synonym: SSO5672

Alternate gene names: 15897288

Gene position: 300683-300522 (Counterclockwise)

Preceding gene: 15897289

Following gene: 15897287

Centisome position: 10.05

GC content: 35.19

Gene sequence:

>162_bases
ATGGAAATGAGTAGAAATAAACCAGTAGCTAAGAAATTTAGATTAGCCAAAGCCTTAAAAGCGAACTCTCCAATACCAAT
ATGGATAGTTCTAAAGACTCGTGGAAGAGTTAGATACAATCCCTTAAGGAGAAATTGGAGGAGAAATGATCTAAAGGTGT
AA

Upstream 100 bases:

>100_bases
GAATAAAGATACCAATAACAGATGAGGAATTAAAGCAAATATTGGAACAGATTTCACAACAGAACAGACGTGATTTCAAA
ATACAAATAAGAGAGAGAGG

Downstream 100 bases:

>100_bases
AAAATGAAAGAGAAAGATAATTTTGAAATGATAATTAATTTAAGAAAAATAAAAACTGGAAAGAGAACTGGTAGAAGTAA
AAGGGCAGTAAAATTCATAA

Product: 50S ribosomal protein L39e

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 53; Mature: 53

Protein sequence:

>53_residues
MEMSRNKPVAKKFRLAKALKANSPIPIWIVLKTRGRVRYNPLRRNWRRNDLKV

Sequences:

>Translated_53_residues
MEMSRNKPVAKKFRLAKALKANSPIPIWIVLKTRGRVRYNPLRRNWRRNDLKV
>Mature_53_residues
MEMSRNKPVAKKFRLAKALKANSPIPIWIVLKTRGRVRYNPLRRNWRRNDLKV

Specific function: Unknown

COG id: COG2167

COG function: function code J; Ribosomal protein L39E

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ribosomal protein L39e family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000077
- InterPro:   IPR020083 [H]

Pfam domain/function: PF00832 Ribosomal_L39 [H]

EC number: NA

Molecular weight: Translated: 6388; Mature: 6388

Theoretical pI: Translated: 12.62; Mature: 12.62

Prosite motif: PS00051 RIBOSOMAL_L39E

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEMSRNKPVAKKFRLAKALKANSPIPIWIVLKTRGRVRYNPLRRNWRRNDLKV
CCCCCCCCHHHHHHHHHHHCCCCCCEEEEEEECCCCEEECCCCCCCCCCCCCC
>Mature Secondary Structure
MEMSRNKPVAKKFRLAKALKANSPIPIWIVLKTRGRVRYNPLRRNWRRNDLKV
CCCCCCCCHHHHHHHHHHHCCCCCCEEEEEEECCCCEEECCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA