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The map label for this gene is nusG [H]

Identifier: 15897281

GI number: 15897281

Start: 297116

End: 297589

Strand: Reverse

Name: nusG [H]

Synonym: SSO0347

Alternate gene names: 15897281

Gene position: 297589-297116 (Counterclockwise)

Preceding gene: 15897282

Following gene: 15897280

Centisome position: 9.95

GC content: 35.02

Gene sequence:

>474_bases
TTGGGGTGTAATTTTGTGGAAAAACCGAATATGAGAAACTATTATGCTATAAAGGTGGTTGGAGGGCAAGAAATAAATGT
AGCTTTAATGCTGGAAGAAAGAATAAAAACTAATAATATTAAAGGAATATACGCAATAATTGTTCCACCCAATTTAAAAG
GATATGTAGTTCTAGAGGCAGAGGGTTTACATATAGTTAAACCATTAATTGCTGGGATAAGGAATGCAAGAGGTCTTGCA
CAAGGTTTACTACCTAGAGATGAAATATTAAAGATTGTATCTAGAAAAACTGTAGGTCCTACTGTAAAACCTGGTGATGT
AGTAGAAGTAATTTCTGGTCCCTTTAGGGGTACTCAAGCTCAAGTGATAAGGGTTGAGGAAGCTAAAGGAGAGGTAGTGT
TAAATATTTTAGAATCAGCATTTCCATTACAAGTCACAGTTCCTCTAGATCAAATTAAGGTCTCAAAGAGGTGA

Upstream 100 bases:

>100_bases
CCGGATAGAAACTTTTTCTCACTTAACCTTAAAGTTACTTTACTAGTATTAGCCGTAGTAGGTGTATTAGCTTACATAAT
TCAACTTGCGTTGACATTAA

Downstream 100 bases:

>100_bases
ATAAGGTGCCCATAAAAACAATAAAAATAATGGTAGAAGGAGGTAATGTTAAGCCAGGACCACCATTAGCGCCAACACTT
TCGCAGTTAGGGTTAAATGT

Product: transcription antitermination protein NusG

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 157; Mature: 156

Protein sequence:

>157_residues
MGCNFVEKPNMRNYYAIKVVGGQEINVALMLEERIKTNNIKGIYAIIVPPNLKGYVVLEAEGLHIVKPLIAGIRNARGLA
QGLLPRDEILKIVSRKTVGPTVKPGDVVEVISGPFRGTQAQVIRVEEAKGEVVLNILESAFPLQVTVPLDQIKVSKR

Sequences:

>Translated_157_residues
MGCNFVEKPNMRNYYAIKVVGGQEINVALMLEERIKTNNIKGIYAIIVPPNLKGYVVLEAEGLHIVKPLIAGIRNARGLA
QGLLPRDEILKIVSRKTVGPTVKPGDVVEVISGPFRGTQAQVIRVEEAKGEVVLNILESAFPLQVTVPLDQIKVSKR
>Mature_156_residues
GCNFVEKPNMRNYYAIKVVGGQEINVALMLEERIKTNNIKGIYAIIVPPNLKGYVVLEAEGLHIVKPLIAGIRNARGLAQ
GLLPRDEILKIVSRKTVGPTVKPGDVVEVISGPFRGTQAQVIRVEEAKGEVVLNILESAFPLQVTVPLDQIKVSKR

Specific function: Unknown

COG id: COG0250

COG function: function code K; Transcription antiterminator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 KOW domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005824
- InterPro:   IPR005825
- InterPro:   IPR014723
- InterPro:   IPR011590
- InterPro:   IPR005100
- InterPro:   IPR006645
- InterPro:   IPR008991 [H]

Pfam domain/function: PF00467 KOW; PF03439 Supt5 [H]

EC number: NA

Molecular weight: Translated: 17192; Mature: 17060

Theoretical pI: Translated: 10.10; Mature: 10.10

Prosite motif: PS01108 RIBOSOMAL_L24

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGCNFVEKPNMRNYYAIKVVGGQEINVALMLEERIKTNNIKGIYAIIVPPNLKGYVVLEA
CCCCCCCCCCCCCEEEEEEECCCEEEEEEEEECCCCCCCCCEEEEEEECCCCCEEEEEEE
EGLHIVKPLIAGIRNARGLAQGLLPRDEILKIVSRKTVGPTVKPGDVVEVISGPFRGTQA
CCCEEHHHHHHHHHCCCHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCEECCCCCCCCCE
QVIRVEEAKGEVVLNILESAFPLQVTVPLDQIKVSKR
EEEEEECCCCCEEEEEHHCCCCEEEEECHHHEEECCC
>Mature Secondary Structure 
GCNFVEKPNMRNYYAIKVVGGQEINVALMLEERIKTNNIKGIYAIIVPPNLKGYVVLEA
CCCCCCCCCCCCEEEEEEECCCEEEEEEEEECCCCCCCCCEEEEEEECCCCCEEEEEEE
EGLHIVKPLIAGIRNARGLAQGLLPRDEILKIVSRKTVGPTVKPGDVVEVISGPFRGTQA
CCCEEHHHHHHHHHCCCHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCEECCCCCCCCCE
QVIRVEEAKGEVVLNILESAFPLQVTVPLDQIKVSKR
EEEEEECCCCCEEEEEHHCCCCEEEEECHHHEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9252104; 11427726 [H]