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The map label for this gene is rps17E [H]

Identifier: 15897229

GI number: 15897229

Start: 243318

End: 243557

Strand: Reverse

Name: rps17E [H]

Synonym: SSO5561

Alternate gene names: 15897229

Gene position: 243557-243318 (Counterclockwise)

Preceding gene: 15897230

Following gene: 15897228

Centisome position: 8.14

GC content: 26.67

Gene sequence:

>240_bases
ATGGGTAATATATATACTAAAGATATAAAAAGAATAGTAAAAGAAATATATGATCGTTATAAAGATGAGATAAAAGATGA
TTATAATACAAATAAACAAATAGTTATTAGATATGTTGACGTAAAGTCAAAGAAAGTGAGGAATAGAATAGCAGGATATC
TTACAAGATATTATAAAATAATGAAAGAAAAAGAGACTTCTCCGGCTGAAGAGAAGGAGGAAATATCCGAAGAGATCTAG

Upstream 100 bases:

>100_bases
ATAGAGAAGTTAAAGAATAGATTTAAGAAAGAGACAGATATGTATAAAACTAAACCAAGCGTATATTCACACGAAAGTTC
ACATGAATAAGGTGATTTAA

Downstream 100 bases:

>100_bases
AATGCCAAAAGTGATCTTGAAAGGACCACTGATTTCTCAATTTAATTTCAGAGAGATATACGTGAATGATAGAGAACTTC
TTAGAGTACTAGTGAAGATA

Product: 30S ribosomal protein S17e

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 79; Mature: 78

Protein sequence:

>79_residues
MGNIYTKDIKRIVKEIYDRYKDEIKDDYNTNKQIVIRYVDVKSKKVRNRIAGYLTRYYKIMKEKETSPAEEKEEISEEI

Sequences:

>Translated_79_residues
MGNIYTKDIKRIVKEIYDRYKDEIKDDYNTNKQIVIRYVDVKSKKVRNRIAGYLTRYYKIMKEKETSPAEEKEEISEEI
>Mature_78_residues
GNIYTKDIKRIVKEIYDRYKDEIKDDYNTNKQIVIRYVDVKSKKVRNRIAGYLTRYYKIMKEKETSPAEEKEEISEEI

Specific function: Unknown

COG id: COG1383

COG function: function code J; Ribosomal protein S17E

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ribosomal protein S17e family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001210
- InterPro:   IPR018273 [H]

Pfam domain/function: PF00833 Ribosomal_S17e [H]

EC number: NA

Molecular weight: Translated: 9628; Mature: 9497

Theoretical pI: Translated: 9.47; Mature: 9.47

Prosite motif: PS00712 RIBOSOMAL_S17E

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGNIYTKDIKRIVKEIYDRYKDEIKDDYNTNKQIVIRYVDVKSKKVRNRIAGYLTRYYKI
CCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHH
MKEKETSPAEEKEEISEEI
HHHHCCCCCHHHHHHHHCC
>Mature Secondary Structure 
GNIYTKDIKRIVKEIYDRYKDEIKDDYNTNKQIVIRYVDVKSKKVRNRIAGYLTRYYKI
CCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHH
MKEKETSPAEEKEEISEEI
HHHHCCCCCHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA