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The map label for this gene is 15897207

Identifier: 15897207

GI number: 15897207

Start: 227300

End: 227599

Strand: Direct

Name: 15897207

Synonym: SSO0262

Alternate gene names: NA

Gene position: 227300-227599 (Clockwise)

Preceding gene: 15897199

Following gene: 15897214

Centisome position: 7.6

GC content: 43.67

Gene sequence:

>300_bases
ATGATAAGGGAATTTCCTAAAACTACTAATGGTGATGTAATCATAAGGGAAAGAAAAGGGAAGTATTATGTCTATAAATT
GGAAACGATAAACGGTGAGGTAAAGGAAACTTATGTTGGTCCTTTAGCTGACGTGGTTGAAACATACGAAAAATTGAAAG
ATAGCAGTGGGGGTGTGAGGGTATCCCCCACAACATGGGCCCGCTGGGATTTGAACCCAGGACCTCCGCCGTGTCAGGGC
GACGTCCTAACCAGGCTAGACGACGGGCCCTTAATACTAGGTTATTGTTTTCTCTTTTAA

Upstream 100 bases:

>100_bases
TCTTTCCTGGTTAGATGAAAAATGTTTATTGATAAGCTATAATATTAAGAAGTATAATGAAAGATATTTATAAATACATG
GATAAATATTTTGACTTTTT

Downstream 100 bases:

>100_bases
ACTTTACCTTCTACTAGTTGTAAATACTTACATAAAAAGAAGGATGCTAGACTCACGGCTCCAAGATCTTGAGTATCTTC
TAATATTCTTACATATTCGC

Product: integrase, ( amino-end fragment)

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 99; Mature: 99

Protein sequence:

>99_residues
MIREFPKTTNGDVIIRERKGKYYVYKLETINGEVKETYVGPLADVVETYEKLKDSSGGVRVSPTTWARWDLNPGPPPCQG
DVLTRLDDGPLILGYCFLF

Sequences:

>Translated_99_residues
MIREFPKTTNGDVIIRERKGKYYVYKLETINGEVKETYVGPLADVVETYEKLKDSSGGVRVSPTTWARWDLNPGPPPCQG
DVLTRLDDGPLILGYCFLF
>Mature_99_residues
MIREFPKTTNGDVIIRERKGKYYVYKLETINGEVKETYVGPLADVVETYEKLKDSSGGVRVSPTTWARWDLNPGPPPCQG
DVLTRLDDGPLILGYCFLF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 11199; Mature: 11199

Theoretical pI: Translated: 5.14; Mature: 5.14

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIREFPKTTNGDVIIRERKGKYYVYKLETINGEVKETYVGPLADVVETYEKLKDSSGGVR
CCCCCCCCCCCCEEEEECCCCEEEEEEEECCCCEEHHCCCHHHHHHHHHHHHCCCCCCEE
VSPTTWARWDLNPGPPPCQGDVLTRLDDGPLILGYCFLF
ECCCCEEEECCCCCCCCCCCCEEEEECCCCEEEEEEECC
>Mature Secondary Structure
MIREFPKTTNGDVIIRERKGKYYVYKLETINGEVKETYVGPLADVVETYEKLKDSSGGVR
CCCCCCCCCCCCEEEEECCCCEEEEEEEECCCCEEHHCCCHHHHHHHHHHHHCCCCCCEE
VSPTTWARWDLNPGPPPCQGDVLTRLDDGPLILGYCFLF
ECCCCEEEECCCCCCCCCCCCEEEEECCCCEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA