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The map label for this gene is soxA-like

Identifier: 15897137

GI number: 15897137

Start: 158520

End: 159971

Strand: Direct

Name: soxA-like

Synonym: SSO0186

Alternate gene names: NA

Gene position: 158520-159971 (Clockwise)

Preceding gene: 15897136

Following gene: 15897138

Centisome position: 5.3

GC content: 31.06

Gene sequence:

>1452_bases
ATGAGGTCTTCAAAAATGGACATGCCGATAGTACTAAGTAAAAGGCATAGAAGGCTTAGAAGTATGAAAGATTGTGAGCC
AGGTTTACCATATAATGAGATCGTGGAGAACGGGAAAAGAATAGACTTATGCTATAGCAAACAGTATAAAAAATATACGA
AGAAAATTGAGATACGAGTTGGCACCAGTATCCTCCATAATAAATTACTGCGAATATTTCCTAATATAGTAAAAATCTAT
TCTAAGCACTTCATTAATTTACCAGATTTAATAACAGAGAATACTGAGAAAAGGGAATTAATATTCATTGAATTAGAGAA
TTTGATTATAGGAGGAGGAACTTCTGGACTAGGAGTCCTATCAGAAATAAGTAAGGAGGAGAAAACGCTCCTAATATCAT
CTAATATCGAATCCAATACTGATATACCTTACCCATTACCGCAAATTAACAAAGATGAGTTCTCTAAGTTATTAAGGGAT
ACTATTAATGAAAATAAAGATAGGATTTTAGAGGGAATTTTATTAGGCAAATTTGATGAAGGAATAGGATTTCTTACAAA
GGATAAGATATTAATGGTGAGAGCTAAAAGAGTCTTTTTAGCAACAGGCGGAAGATACATTCCACCAATATTTGATGGAA
ACGATATACCCGGTATAATATCAAAGAATCTTTACCTAAGATATGGAAATCGCATTACAAAGGCGATTGCTTTAGGAAAT
AGTGACGATATAATAAAAGTATTGTTTAAAGTTGAAAAGAGGGTTATAATCAATAATGGCGTATTATTTTTGTCAAAATA
TTATAAGGAATTAATAGACGAGCTAGGTGTAGAAATAATAAATACTAACAACTTGAAAGTGAAAAGAGAAAAAGGTGGAA
TGCTAAAGATAATCACTAATGAAAGATCTTTCGATTCTAATATTTTAGTTTATGCAATAGTTAAACAACCGAAAATAGAC
CATTCATATAATATTGGGATACCATATAATTTTAGTGAATATTTCCACATCTATATGCCGATACATTCTATAGAGGGAAA
GACTAATGATAACATCTACATAGTTGGAGGAATGCGTGGAATCTCAGATGAATACACTTCATTCTTAAGCGGAAAAACAG
CTGTTAATGAGAAATATCTAGATGAATTCATAAATAATTTGAAAGATTATACGTATATTTATGATTATTATTATCAAAAA
AATCCTAAGGAAAATCCCTCTCCGTATATTTATGGGAATAAGGGATACGTATGTGAATGTGAAGATATTACCCTAAGCGA
AGTAAATAGACAAGTAGGCAGAGGATTTAGTAAAGTAGAAGAAATTAAAAGAACTATAGGTTTAGGTACAGGAGAGTGTC
AAGGAAAATTATGTACGTATTCTCTAGGAAGTTTTCTAGGTGATAGGCAACTTATAACGTTTAGAACTCCTCTTTATAGA
ATGGTGATTTAA

Upstream 100 bases:

>100_bases
AATTTCACTAAGAAACAAGTAAACATGAAGATAGTTGACGTAACTCCCACGATATTGAAACTTTATGGAATAAATTGTAA
ATCTGATGGAAAAATTGTAA

Downstream 100 bases:

>100_bases
ATGATAATCATTGTTGGTGCCGGTTCCCATGGTTTAAGTTTAGCATATCATTTAGTAAAAAAGGGCTATAGTAAAAAAGA
TATTACACTAGTAGAATGGA

Product: sarcosine oxidase, subunit alpha related (soxA), putative (soxA-like)

Products: glycine; formaldehyde; H2O2

Alternate protein names: None

Number of amino acids: Translated: 483; Mature: 483

Protein sequence:

>483_residues
MRSSKMDMPIVLSKRHRRLRSMKDCEPGLPYNEIVENGKRIDLCYSKQYKKYTKKIEIRVGTSILHNKLLRIFPNIVKIY
SKHFINLPDLITENTEKRELIFIELENLIIGGGTSGLGVLSEISKEEKTLLISSNIESNTDIPYPLPQINKDEFSKLLRD
TINENKDRILEGILLGKFDEGIGFLTKDKILMVRAKRVFLATGGRYIPPIFDGNDIPGIISKNLYLRYGNRITKAIALGN
SDDIIKVLFKVEKRVIINNGVLFLSKYYKELIDELGVEIINTNNLKVKREKGGMLKIITNERSFDSNILVYAIVKQPKID
HSYNIGIPYNFSEYFHIYMPIHSIEGKTNDNIYIVGGMRGISDEYTSFLSGKTAVNEKYLDEFINNLKDYTYIYDYYYQK
NPKENPSPYIYGNKGYVCECEDITLSEVNRQVGRGFSKVEEIKRTIGLGTGECQGKLCTYSLGSFLGDRQLITFRTPLYR
MVI

Sequences:

>Translated_483_residues
MRSSKMDMPIVLSKRHRRLRSMKDCEPGLPYNEIVENGKRIDLCYSKQYKKYTKKIEIRVGTSILHNKLLRIFPNIVKIY
SKHFINLPDLITENTEKRELIFIELENLIIGGGTSGLGVLSEISKEEKTLLISSNIESNTDIPYPLPQINKDEFSKLLRD
TINENKDRILEGILLGKFDEGIGFLTKDKILMVRAKRVFLATGGRYIPPIFDGNDIPGIISKNLYLRYGNRITKAIALGN
SDDIIKVLFKVEKRVIINNGVLFLSKYYKELIDELGVEIINTNNLKVKREKGGMLKIITNERSFDSNILVYAIVKQPKID
HSYNIGIPYNFSEYFHIYMPIHSIEGKTNDNIYIVGGMRGISDEYTSFLSGKTAVNEKYLDEFINNLKDYTYIYDYYYQK
NPKENPSPYIYGNKGYVCECEDITLSEVNRQVGRGFSKVEEIKRTIGLGTGECQGKLCTYSLGSFLGDRQLITFRTPLYR
MVI
>Mature_483_residues
MRSSKMDMPIVLSKRHRRLRSMKDCEPGLPYNEIVENGKRIDLCYSKQYKKYTKKIEIRVGTSILHNKLLRIFPNIVKIY
SKHFINLPDLITENTEKRELIFIELENLIIGGGTSGLGVLSEISKEEKTLLISSNIESNTDIPYPLPQINKDEFSKLLRD
TINENKDRILEGILLGKFDEGIGFLTKDKILMVRAKRVFLATGGRYIPPIFDGNDIPGIISKNLYLRYGNRITKAIALGN
SDDIIKVLFKVEKRVIINNGVLFLSKYYKELIDELGVEIINTNNLKVKREKGGMLKIITNERSFDSNILVYAIVKQPKID
HSYNIGIPYNFSEYFHIYMPIHSIEGKTNDNIYIVGGMRGISDEYTSFLSGKTAVNEKYLDEFINNLKDYTYIYDYYYQK
NPKENPSPYIYGNKGYVCECEDITLSEVNRQVGRGFSKVEEIKRTIGLGTGECQGKLCTYSLGSFLGDRQLITFRTPLYR
MVI

Specific function: Unknown

COG id: COG0446

COG function: function code R; Uncharacterized NAD(FAD)-dependent dehydrogenases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 1.5.3.1

Molecular weight: Translated: 55528; Mature: 55528

Theoretical pI: Translated: 9.34; Mature: 9.34

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRSSKMDMPIVLSKRHRRLRSMKDCEPGLPYNEIVENGKRIDLCYSKQYKKYTKKIEIRV
CCCCCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHCCCCEEEEEHHHHHHHHHHEEEEEE
GTSILHNKLLRIFPNIVKIYSKHFINLPDLITENTEKRELIFIELENLIIGGGTSGLGVL
CHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHCCCCCCCEEEEEEEEEEEEECCCCCHHHH
SEISKEEKTLLISSNIESNTDIPYPLPQINKDEFSKLLRDTINENKDRILEGILLGKFDE
HHHCCCCCEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHEECCCC
GIGFLTKDKILMVRAKRVFLATGGRYIPPIFDGNDIPGIISKNLYLRYGNRITKAIALGN
CCCEEECCCEEEEEEEEEEEEECCCCCCCCCCCCCCCHHHCCCEEEEECCCEEEEEECCC
SDDIIKVLFKVEKRVIINNGVLFLSKYYKELIDELGVEIINTNNLKVKREKGGMLKIITN
CCHHHHHHHHHHCEEEEECCCHHHHHHHHHHHHHCCEEEEECCCEEEEECCCCEEEEEEC
ERSFDSNILVYAIVKQPKIDHSYNIGIPYNFSEYFHIYMPIHSIEGKTNDNIYIVGGMRG
CCCCCCCEEEEEEECCCCCCCCEECCCCCCHHHEEEEEEEEEECCCCCCCCEEEEECCCC
ISDEYTSFLSGKTAVNEKYLDEFINNLKDYTYIYDYYYQKNPKENPSPYIYGNKGYVCEC
CCHHHHHHHCCCHHCCHHHHHHHHHHHHHCEEEEEEEECCCCCCCCCCEEECCCCCEEEE
EDITLSEVNRQVGRGFSKVEEIKRTIGLGTGECQGKLCTYSLGSFLGDRQLITFRTPLYR
CCCCHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCEEEEEHHHHCCCCEEEEEECCHHH
MVI
HCC
>Mature Secondary Structure
MRSSKMDMPIVLSKRHRRLRSMKDCEPGLPYNEIVENGKRIDLCYSKQYKKYTKKIEIRV
CCCCCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHCCCCEEEEEHHHHHHHHHHEEEEEE
GTSILHNKLLRIFPNIVKIYSKHFINLPDLITENTEKRELIFIELENLIIGGGTSGLGVL
CHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHCCCCCCCEEEEEEEEEEEEECCCCCHHHH
SEISKEEKTLLISSNIESNTDIPYPLPQINKDEFSKLLRDTINENKDRILEGILLGKFDE
HHHCCCCCEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHEECCCC
GIGFLTKDKILMVRAKRVFLATGGRYIPPIFDGNDIPGIISKNLYLRYGNRITKAIALGN
CCCEEECCCEEEEEEEEEEEEECCCCCCCCCCCCCCCHHHCCCEEEEECCCEEEEEECCC
SDDIIKVLFKVEKRVIINNGVLFLSKYYKELIDELGVEIINTNNLKVKREKGGMLKIITN
CCHHHHHHHHHHCEEEEECCCHHHHHHHHHHHHHCCEEEEECCCEEEEECCCCEEEEEEC
ERSFDSNILVYAIVKQPKIDHSYNIGIPYNFSEYFHIYMPIHSIEGKTNDNIYIVGGMRG
CCCCCCCEEEEEEECCCCCCCCEECCCCCCHHHEEEEEEEEEECCCCCCCCEEEEECCCC
ISDEYTSFLSGKTAVNEKYLDEFINNLKDYTYIYDYYYQKNPKENPSPYIYGNKGYVCEC
CCHHHHHHHCCCHHCCHHHHHHHHHHHHHCEEEEEEEECCCCCCCCCCEEECCCCCEEEE
EDITLSEVNRQVGRGFSKVEEIKRTIGLGTGECQGKLCTYSLGSFLGDRQLITFRTPLYR
CCCCHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCEEEEEHHHHCCCCEEEEEECCHHH
MVI
HCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: sarcosine; H2O; O2

Specific reaction: sarcosine + H2O + O2 = glycine + formaldehyde + H2O2

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA