Click here to switch to the map view.

The map label for this gene is hpS-1 [C]

Identifier: 15897103

GI number: 15897103

Start: 127134

End: 127763

Strand: Direct

Name: hpS-1 [C]

Synonym: SSO0151

Alternate gene names: 15897103

Gene position: 127134-127763 (Clockwise)

Preceding gene: 15897100

Following gene: 15897104

Centisome position: 4.25

GC content: 36.19

Gene sequence:

>630_bases
TTGTCATCTTCTCTCGATGACTATCCTCTTTCTTTAAAGACAATGTACGATATAGCTGAGTTTATACTCAGAGCGGCTAA
AGCAATAAAACCAGAACAAACAATTAAGATGGTAAATGAATTAGAAAATTTCTATAAAAATAACCGAAATGGAAAGGTAT
TGGTAATGGGGGCTGGGAGAAGCGGACTAGTAGGAAGAGCTTTTGCTATGAGGTTACTTCATTTAGGTTTTAACTCCTAT
GTTCTAGGAGAAACCATAGTACCTGCTATTGGAAAGAACGATATAGTAGTTGCTATTTCAGGTTCTGGTAGAACTAAACT
AATTCTGACAGCTGCAGAAGCGGCAAAAGAAGCCGGAGCTAAATTAATATCAATAACAAGTTATTTCGATAGTCCCCTAG
CAAAAATATCTGATGTGGTAATCGAAATTCCAGGTAGGACAAAATACTCAAAGAATGAGGACTATTTCGCTAGACAAATA
CTTGGAATAACTGAGCCGTTAGCACCATTAGGTACACTATTTGAGGATACTACGCAAATTTTCTTAGATGGTATTGTAGC
AGAGCTCATGATAAGGTTGAAGAAGACTGAAGAAGATTTGAGGTTAATTCATGCAAATATTGAACTATAG

Upstream 100 bases:

>100_bases
CAAAATCTCAATTCAATATAATTGATCTAAGAACAGAGTATATCAGAAAGAGCAATGCTTATATAATAAGCAAAGTAAGA
TAATAATTGGCGGTTCTAAT

Downstream 100 bases:

>100_bases
TTTCTCTTCAGTCACCCATAATTTTTAATTTATAGAATAAATATGGGTATAGAAAACTTTACCGCAAAGATCGTTGGATT
ATCAATAGTATCGCTGCTTG

Product: D-arabino 3-hexulose 6-phosphate formaldehyde lyase (hpS-1)

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 209; Mature: 208

Protein sequence:

>209_residues
MSSSLDDYPLSLKTMYDIAEFILRAAKAIKPEQTIKMVNELENFYKNNRNGKVLVMGAGRSGLVGRAFAMRLLHLGFNSY
VLGETIVPAIGKNDIVVAISGSGRTKLILTAAEAAKEAGAKLISITSYFDSPLAKISDVVIEIPGRTKYSKNEDYFARQI
LGITEPLAPLGTLFEDTTQIFLDGIVAELMIRLKKTEEDLRLIHANIEL

Sequences:

>Translated_209_residues
MSSSLDDYPLSLKTMYDIAEFILRAAKAIKPEQTIKMVNELENFYKNNRNGKVLVMGAGRSGLVGRAFAMRLLHLGFNSY
VLGETIVPAIGKNDIVVAISGSGRTKLILTAAEAAKEAGAKLISITSYFDSPLAKISDVVIEIPGRTKYSKNEDYFARQI
LGITEPLAPLGTLFEDTTQIFLDGIVAELMIRLKKTEEDLRLIHANIEL
>Mature_208_residues
SSSLDDYPLSLKTMYDIAEFILRAAKAIKPEQTIKMVNELENFYKNNRNGKVLVMGAGRSGLVGRAFAMRLLHLGFNSYV
LGETIVPAIGKNDIVVAISGSGRTKLILTAAEAAKEAGAKLISITSYFDSPLAKISDVVIEIPGRTKYSKNEDYFARQIL
GITEPLAPLGTLFEDTTQIFLDGIVAELMIRLKKTEEDLRLIHANIEL

Specific function: Unknown

COG id: COG0794

COG function: function code M; Predicted sugar phosphate isomerase involved in capsule formation

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 SIS domain [H]

Homologues:

Organism=Escherichia coli, GI1788767, Length=104, Percent_Identity=35.5769230769231, Blast_Score=66, Evalue=2e-12,

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017552
- InterPro:   IPR001347 [H]

Pfam domain/function: PF01380 SIS [H]

EC number: NA

Molecular weight: Translated: 22981; Mature: 22850

Theoretical pI: Translated: 7.64; Mature: 7.64

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSSSLDDYPLSLKTMYDIAEFILRAAKAIKPEQTIKMVNELENFYKNNRNGKVLVMGAGR
CCCCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCEEEEEECCC
SGLVGRAFAMRLLHLGFNSYVLGETIVPAIGKNDIVVAISGSGRTKLILTAAEAAKEAGA
CCCHHHHHHHHHHHHCCCCEECCHHHHCCCCCCCEEEEEECCCCEEEEEEHHHHHHHCCC
KLISITSYFDSPLAKISDVVIEIPGRTKYSKNEDYFARQILGITEPLAPLGTLFEDTTQI
CEEEHHHHHCCHHHHHHHHEEECCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHH
FLDGIVAELMIRLKKTEEDLRLIHANIEL
HHHHHHHHHHHHHHCCHHHHEEEEECCCC
>Mature Secondary Structure 
SSSLDDYPLSLKTMYDIAEFILRAAKAIKPEQTIKMVNELENFYKNNRNGKVLVMGAGR
CCCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCEEEEEECCC
SGLVGRAFAMRLLHLGFNSYVLGETIVPAIGKNDIVVAISGSGRTKLILTAAEAAKEAGA
CCCHHHHHHHHHHHHCCCCEECCHHHHCCCCCCCEEEEEECCCCEEEEEEHHHHHHHCCC
KLISITSYFDSPLAKISDVVIEIPGRTKYSKNEDYFARQILGITEPLAPLGTLFEDTTQI
CEEEHHHHHCCHHHHHHHHEEECCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHH
FLDGIVAELMIRLKKTEEDLRLIHANIEL
HHHHHHHHHHHHHHCCHHHHEEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10382966 [H]