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The map label for this gene is gspE-1 [C]

Identifier: 15897080

GI number: 15897080

Start: 98567

End: 100018

Strand: Reverse

Name: gspE-1 [C]

Synonym: SSO0120

Alternate gene names: 15897080

Gene position: 100018-98567 (Counterclockwise)

Preceding gene: 15897081

Following gene: 15897079

Centisome position: 3.34

GC content: 32.16

Gene sequence:

>1452_bases
GTGAGTATATTTTTTCTGAACAATGGTATCATGAATATTCTCCAAGAGTATTCTGTTCTAAATGCTAAAGTCATCATATA
TGAGGAAAATGGGATAGGTTATTATAAAGTAAATGAACCTAACCTAGATCAGAATGAAATTGAGATACTCAATTCTATAT
TAGAATATATCTACTCTACTCCTAGTGTACCTAATATAGAAGAGACAGTAGTTAAGATACTGAAAAATAAGGGTATTAGT
GATCAAGGGATTATCGAAAAAATAATTTATTATTTGAGAAAAAGAATAGGTTATGACGAGTTAACTGTACCCTTAGCTGA
CCCTTATGTTGAAGAAATAGAATGTAAAGGATTCTCATACCCTGTCACTGTAGTTCATAGGATTGTTACAAGATTCCCGA
GATTATATACTAATATAATCTTGGAGCAAGAAGATCACGTACTAAAGGTTATTGAAAAACTCGCTAATAAGGCAGATAAA
CCGGTTAGTATTGCTAAACCATACCTTGAATTTTCCCTGCCTGAGGGTCATAGAGTTGCAGCTACAGTATCTCGTGAGGT
TTCATTACCTGGTTCCACATTTGATATAAGGAAATTCCCACTAAAGCCAATAAGTCCTATATCACTGATTAAAAACGAAT
CGATAAGTTCGCTAATGTTAGCCTATATTTGGTTTTTATTAGATTATAAGCCGTTCTTTTTGATCATAGGTTCTACAGGA
TCTGGAAAGACTACTTTACTTAATTCAATTCTAAGTATGATTAATCCTTTCTTTAAGGTAATTACCATAGAGGATACTCC
AGAAATAAACATAATTCATGATAACTGGATAAGGTTTTTTGCCAGACAATCAATTTCCTCTCAATTTGAAGTATCGTTAA
TGGATTTAGCTAAACTATCATTAAGATATAGACCGGATTATCTAGTTATAGGGGAGATTCGGGGTAAGGAAATAGAGGCA
CTAGTTCATGCATCTGCTTCTGGGCATGGCTCGTTGGCTACATTTCATGCAGGAAATCCACATGAAGCATTGACTAGATT
GCTTAGCCTTCTAAATAAGGATGTTGCTAAATTATTTTTACAAAATCTGTGGGGTATTATAGTTTTAGGAACGCTAAGGG
ATCGTAATGGAAATATAAGGCGTATAATAAGGTCGATTTATGAAATAGTCTATACTAGAGGTAAACTAAGATTTAGGCCA
GTATTAAGATGGTCTTTTTCCTCTAACACATTCATGCCTAACAATATTGATGATTTAATTAAAAGGTCCTATAGGATCAG
TTATATATCAAAGACATATGAAATACCAATTTCAGAAATAACCAAGGAGATTAGTAATAGAGTTAAAACTCTTAATAATT
TTGTGAGTAATAATATTTTAGATCTAGAAGAGTTCAGTGTTTATTTAAAGAAAATAAGTCAAGGTGATAAAGTTGAAACT
AAAGCTATTTAA

Upstream 100 bases:

>100_bases
AGTCTCAATACGAATTTGTTGATACTATTAAGTTATCAATCTTGATGGCTTTAAGTGAAGCAAAGGCTATAAAAGAAGTT
TTAAGTAATTTCGGTATTGT

Downstream 100 bases:

>100_bases
AAAAATGAATTTATTTGAATTAATGAATACAAGAATAAATGAAAATATCAAATATTATGGTGATGATATGGAAAGACTCC
GTAAAGAATATATTGTGATG

Product: Type II secretion system protein, virB homolog (gspE-1)

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 483; Mature: 482

Protein sequence:

>483_residues
MSIFFLNNGIMNILQEYSVLNAKVIIYEENGIGYYKVNEPNLDQNEIEILNSILEYIYSTPSVPNIEETVVKILKNKGIS
DQGIIEKIIYYLRKRIGYDELTVPLADPYVEEIECKGFSYPVTVVHRIVTRFPRLYTNIILEQEDHVLKVIEKLANKADK
PVSIAKPYLEFSLPEGHRVAATVSREVSLPGSTFDIRKFPLKPISPISLIKNESISSLMLAYIWFLLDYKPFFLIIGSTG
SGKTTLLNSILSMINPFFKVITIEDTPEINIIHDNWIRFFARQSISSQFEVSLMDLAKLSLRYRPDYLVIGEIRGKEIEA
LVHASASGHGSLATFHAGNPHEALTRLLSLLNKDVAKLFLQNLWGIIVLGTLRDRNGNIRRIIRSIYEIVYTRGKLRFRP
VLRWSFSSNTFMPNNIDDLIKRSYRISYISKTYEIPISEITKEISNRVKTLNNFVSNNILDLEEFSVYLKKISQGDKVET
KAI

Sequences:

>Translated_483_residues
MSIFFLNNGIMNILQEYSVLNAKVIIYEENGIGYYKVNEPNLDQNEIEILNSILEYIYSTPSVPNIEETVVKILKNKGIS
DQGIIEKIIYYLRKRIGYDELTVPLADPYVEEIECKGFSYPVTVVHRIVTRFPRLYTNIILEQEDHVLKVIEKLANKADK
PVSIAKPYLEFSLPEGHRVAATVSREVSLPGSTFDIRKFPLKPISPISLIKNESISSLMLAYIWFLLDYKPFFLIIGSTG
SGKTTLLNSILSMINPFFKVITIEDTPEINIIHDNWIRFFARQSISSQFEVSLMDLAKLSLRYRPDYLVIGEIRGKEIEA
LVHASASGHGSLATFHAGNPHEALTRLLSLLNKDVAKLFLQNLWGIIVLGTLRDRNGNIRRIIRSIYEIVYTRGKLRFRP
VLRWSFSSNTFMPNNIDDLIKRSYRISYISKTYEIPISEITKEISNRVKTLNNFVSNNILDLEEFSVYLKKISQGDKVET
KAI
>Mature_482_residues
SIFFLNNGIMNILQEYSVLNAKVIIYEENGIGYYKVNEPNLDQNEIEILNSILEYIYSTPSVPNIEETVVKILKNKGISD
QGIIEKIIYYLRKRIGYDELTVPLADPYVEEIECKGFSYPVTVVHRIVTRFPRLYTNIILEQEDHVLKVIEKLANKADKP
VSIAKPYLEFSLPEGHRVAATVSREVSLPGSTFDIRKFPLKPISPISLIKNESISSLMLAYIWFLLDYKPFFLIIGSTGS
GKTTLLNSILSMINPFFKVITIEDTPEINIIHDNWIRFFARQSISSQFEVSLMDLAKLSLRYRPDYLVIGEIRGKEIEAL
VHASASGHGSLATFHAGNPHEALTRLLSLLNKDVAKLFLQNLWGIIVLGTLRDRNGNIRRIIRSIYEIVYTRGKLRFRPV
LRWSFSSNTFMPNNIDDLIKRSYRISYISKTYEIPISEITKEISNRVKTLNNFVSNNILDLEEFSVYLKKISQGDKVETK
AI

Specific function: Involved In A General Secretion Pathway (Gsp) For The Export Of Proteins (By Similarity). [C]

COG id: COG0630

COG function: function code NU; Type IV secretory pathway, VirB11 components, and related ATPases involved in archaeal flagella biosynthesis

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the GSP E family [H]

Homologues:

Organism=Escherichia coli, GI1789723, Length=140, Percent_Identity=32.1428571428571, Blast_Score=64, Evalue=2e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001482 [H]

Pfam domain/function: PF00437 GSPII_E [H]

EC number: NA

Molecular weight: Translated: 55371; Mature: 55240

Theoretical pI: Translated: 9.20; Mature: 9.20

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSIFFLNNGIMNILQEYSVLNAKVIIYEENGIGYYKVNEPNLDQNEIEILNSILEYIYST
CEEEEECCCHHHHHHHHHHCCEEEEEEECCCEEEEECCCCCCCHHHHHHHHHHHHHHHCC
PSVPNIEETVVKILKNKGISDQGIIEKIIYYLRKRIGYDELTVPLADPYVEEIECKGFSY
CCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCEEECCCCCHHHHHHCCCCCC
PVTVVHRIVTRFPRLYTNIILEQEDHVLKVIEKLANKADKPVSIAKPYLEFSLPEGHRVA
HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCHHHCHHHHCCCCCCCEEE
ATVSREVSLPGSTFDIRKFPLKPISPISLIKNESISSLMLAYIWFLLDYKPFFLIIGSTG
EEEEHEECCCCCCEECCCCCCCCCCHHHHHHCCCHHHHHHHHHHHHHCCCCEEEEEECCC
SGKTTLLNSILSMINPFFKVITIEDTPEINIIHDNWIRFFARQSISSQFEVSLMDLAKLS
CCHHHHHHHHHHHHCHHEEEEEECCCCCEEEEHHHHHHHHHHHHCCCHHHHHHHHHHHHH
LRYRPDYLVIGEIRGKEIEALVHASASGHGSLATFHAGNPHEALTRLLSLLNKDVAKLFL
HEECCCEEEEECCCCCHHHHHHEECCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHH
QNLWGIIVLGTLRDRNGNIRRIIRSIYEIVYTRGKLRFRPVLRWSFSSNTFMPNNIDDLI
HHCCCEEEEEEEECCCCCHHHHHHHHHHHHHHCCCEEEEEEEEEECCCCCCCCCCHHHHH
KRSYRISYISKTYEIPISEITKEISNRVKTLNNFVSNNILDLEEFSVYLKKISQGDKVET
HHHHHHEEEHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCC
KAI
CCC
>Mature Secondary Structure 
SIFFLNNGIMNILQEYSVLNAKVIIYEENGIGYYKVNEPNLDQNEIEILNSILEYIYST
EEEEECCCHHHHHHHHHHCCEEEEEEECCCEEEEECCCCCCCHHHHHHHHHHHHHHHCC
PSVPNIEETVVKILKNKGISDQGIIEKIIYYLRKRIGYDELTVPLADPYVEEIECKGFSY
CCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCEEECCCCCHHHHHHCCCCCC
PVTVVHRIVTRFPRLYTNIILEQEDHVLKVIEKLANKADKPVSIAKPYLEFSLPEGHRVA
HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCHHHCHHHHCCCCCCCEEE
ATVSREVSLPGSTFDIRKFPLKPISPISLIKNESISSLMLAYIWFLLDYKPFFLIIGSTG
EEEEHEECCCCCCEECCCCCCCCCCHHHHHHCCCHHHHHHHHHHHHHCCCCEEEEEECCC
SGKTTLLNSILSMINPFFKVITIEDTPEINIIHDNWIRFFARQSISSQFEVSLMDLAKLS
CCHHHHHHHHHHHHCHHEEEEEECCCCCEEEEHHHHHHHHHHHHCCCHHHHHHHHHHHHH
LRYRPDYLVIGEIRGKEIEALVHASASGHGSLATFHAGNPHEALTRLLSLLNKDVAKLFL
HEECCCEEEEECCCCCHHHHHHEECCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHH
QNLWGIIVLGTLRDRNGNIRRIIRSIYEIVYTRGKLRFRPVLRWSFSSNTFMPNNIDDLI
HHCCCEEEEEEEECCCCCHHHHHHHHHHHHHHCCCEEEEEEEEEECCCCCCCCCCHHHHH
KRSYRISYISKTYEIPISEITKEISNRVKTLNNFVSNNILDLEEFSVYLKKISQGDKVET
HHHHHHEEEHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCC
KAI
CCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]