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The map label for this gene is 15897012

Identifier: 15897012

GI number: 15897012

Start: 36667

End: 37320

Strand: Reverse

Name: 15897012

Synonym: SSO0042

Alternate gene names: NA

Gene position: 37320-36667 (Counterclockwise)

Preceding gene: 15897013

Following gene: 15897009

Centisome position: 1.25

GC content: 58.26

Gene sequence:

>654_bases
GTGGGCAGGTTGTACGGGGTGAGGAAGAAGTTGTTGGAGATTTCCTTCAAGCTTGAGGAGAAGTGCCTACCCAGTTACCT
CCCTGCGAGCGCGCATCTCGTGGACTTCATGGCGTGGCTAGTGGACTCCTTCCTACTGGACTTACCTCCTGGGAAGAGGA
GCGTGGAGACCTTTCGGGAGAAGGCGGAGCTGGAGAGGAGGGAAGGTAACTTGGAGAGGGCCGGGAAGCTGCTCTCCCTG
GGGAGAACCAAGAGGAGGTTCGAGGGAAGGTGGACCAAGAAGAGAGGGGTCTCGCACTACGGGCTTAAGGCCGTGGCCGT
GATCTCCGTCTCCCTCTTCATGAGGTCCATCACGGTGAAGCCAGCCAACTTCTCGGACAAGAGGTTCAAGTCACCGCTCA
AGGGGATTAAGATCGCGGACAGGGGATTCTCTCCCTCCCCGACACAGCTCATAGCGCGGGAGAAGCCCTTCACTACCCTG
AGGGCCCACGTGGAGTTCTTCGGCACCTACCTGAACGCGTTCTGGAGGCCCTACGGGACCACGACCTGGAGGAACGACGT
CTTCCTTCACGTCCTGGGAGTGATCTACAACATCAAGATATTCCTCGCGATCCAACGGAGGACTCCTCCAGAACGTAGAG
CCGTTCAGCTCTGA

Upstream 100 bases:

>100_bases
GTATTCATTAAGGCCAATACAATGGAATTATTTTCAATAATATTTTATAAAATAATACTAGACTATAGACTTACTGGAAG
TAGTAACGCTGCACGACTTC

Downstream 100 bases:

>100_bases
GACGCACCTCCTCGCGATCAGACAACGCTATGCGCGATAGGTAAATCCTCTCGTCTTGATATTTTTCCATTATAAAGTTT
TTCTCGGTGATCCAGGTCCT

Product: second ORF in transposon ISC1234

Products: NA

Alternate protein names: Transposase

Number of amino acids: Translated: 217; Mature: 216

Protein sequence:

>217_residues
MGRLYGVRKKLLEISFKLEEKCLPSYLPASAHLVDFMAWLVDSFLLDLPPGKRSVETFREKAELERREGNLERAGKLLSL
GRTKRRFEGRWTKKRGVSHYGLKAVAVISVSLFMRSITVKPANFSDKRFKSPLKGIKIADRGFSPSPTQLIAREKPFTTL
RAHVEFFGTYLNAFWRPYGTTTWRNDVFLHVLGVIYNIKIFLAIQRRTPPERRAVQL

Sequences:

>Translated_217_residues
MGRLYGVRKKLLEISFKLEEKCLPSYLPASAHLVDFMAWLVDSFLLDLPPGKRSVETFREKAELERREGNLERAGKLLSL
GRTKRRFEGRWTKKRGVSHYGLKAVAVISVSLFMRSITVKPANFSDKRFKSPLKGIKIADRGFSPSPTQLIAREKPFTTL
RAHVEFFGTYLNAFWRPYGTTTWRNDVFLHVLGVIYNIKIFLAIQRRTPPERRAVQL
>Mature_216_residues
GRLYGVRKKLLEISFKLEEKCLPSYLPASAHLVDFMAWLVDSFLLDLPPGKRSVETFREKAELERREGNLERAGKLLSLG
RTKRRFEGRWTKKRGVSHYGLKAVAVISVSLFMRSITVKPANFSDKRFKSPLKGIKIADRGFSPSPTQLIAREKPFTTLR
AHVEFFGTYLNAFWRPYGTTTWRNDVFLHVLGVIYNIKIFLAIQRRTPPERRAVQL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 25072; Mature: 24941

Theoretical pI: Translated: 11.24; Mature: 11.24

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGRLYGVRKKLLEISFKLEEKCLPSYLPASAHLVDFMAWLVDSFLLDLPPGKRSVETFRE
CCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHH
KAELERREGNLERAGKLLSLGRTKRRFEGRWTKKRGVSHYGLKAVAVISVSLFMRSITVK
HHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCHHHCCCCHHCHHHHHHHHHHHHHHHHCCC
PANFSDKRFKSPLKGIKIADRGFSPSPTQLIAREKPFTTLRAHVEFFGTYLNAFWRPYGT
CCCCCHHHHHCHHHCCEEECCCCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCC
TTWRNDVFLHVLGVIYNIKIFLAIQRRTPPERRAVQL
CCCCHHHHHHHHHHHHHHHHEEEEECCCCCHHCCCCC
>Mature Secondary Structure 
GRLYGVRKKLLEISFKLEEKCLPSYLPASAHLVDFMAWLVDSFLLDLPPGKRSVETFRE
CCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHH
KAELERREGNLERAGKLLSLGRTKRRFEGRWTKKRGVSHYGLKAVAVISVSLFMRSITVK
HHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCHHHCCCCHHCHHHHHHHHHHHHHHHHCCC
PANFSDKRFKSPLKGIKIADRGFSPSPTQLIAREKPFTTLRAHVEFFGTYLNAFWRPYGT
CCCCCHHHHHCHHHCCEEECCCCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCC
TTWRNDVFLHVLGVIYNIKIFLAIQRRTPPERRAVQL
CCCCHHHHHHHHHHHHHHHHEEEEECCCCCHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA