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The map label for this gene is ydaM [H]

Identifier: 15896972

GI number: 15896972

Start: 2991448

End: 2992245

Strand: Direct

Name: ydaM [H]

Synonym: SSO12256

Alternate gene names: 15896972

Gene position: 2991448-2992245 (Clockwise)

Preceding gene: 15899946

Following gene: NA

Centisome position: 99.97

GC content: 34.34

Gene sequence:

>1050_bases
TTGATAGTTCCAGTCAAAAATGAGGAAAGAGTGCTTCCTAGATTATTAGATCGGCTCGTAAATCTAGAATATGACAAGTC
TAAATATGAAATAATAGTAGTAGAAGATGGTTCTACTGATAGAACCTTCCAAATTTGTAAAGAGTACGAGATAAAGTATA
ACAACCTTATAAGATGCTATAGTCTTCCGAGAGCTAACGTACCGAATGGGAAAAGTAGAGCGTTAAATTTTGCCTTAAGG
ATTAGTAAGGGAGAAATTATAGGTATATTCGATGGAGATACAGTACCAAGATTAGATATTTTGGAGTACGTTGAACCAAA
ATTTGAGGATATTACCGTTGGTGCAGTTCAAGGAAAATTAGTTCCAATAAATGTGAGGGAAAGTGTAACAAGTAGATTAG
CTGCTATTGAGGAATTAATATATGAATATTCAATAGCTGGAAGAGCTAAAGTTGGGCTCTTTGTACCAATTGAAGGAACT
TGTTCTTTCATAAGGAAAAGTATAATTATGGAGTTAGGCGGATGGAATGAATATTCTCTCACTGAAGATCTAGATATTAG
CCTCAAAATCGTTAATAAAGGCTGTAAGATCGTTTATTCTCCCACAACTATTAGTTGGAGGGAAGTTCCAGTTAGCTTGA
GGGTTTTAATTAGGCAAAGATTAAGATGGTATAGAGGGCATTTAGAAGTGCAATTAGGCAAACTTAGAAAGATCGATTTA
AGAATAATAGACGGTATACTAATAGTGCTTACGCCATTCTTTATGGTCTTAAATCTGGTGAATTACTCTCTAGTATTAGT
ATACTCTTCTTCCCTATACATTGTCGCAGCAAGCTTAGTTTCTTTAGCCTCTCTGCTTTCATTATTACTTATAATCTTAA
TAGCAAGGAGACATATGATAGAGTATTTCTATATGATTCCTTCGTTCGTTTATATGAACTTTATTGTCGCACTAAACTTC
ACTGCAATATTTTTAGAGTTAATAAGAGCACCTAGAGTGTGGGTAAAAACTGAAAGAAGTGCCAAGGTTACGGGGGAGGT
CATGGGATGA

Upstream 100 bases:

>100_bases
ATAGTATCCTCGTGGACTGTGTATAATGGTATATTATCAATACTCGGGGTAACGTGGAAACCGTTCGAGAGCAAAAATCA
TAGTGGAATAACATTTAGTC

Downstream 100 bases:

>100_bases
TAACTGAATTTTTACTTAAAAAGAAATTAGAAGAACATTTAAGCCATGTAAAGGAAGAGAATACGATATATGTAACAGAT
TTAGTAAGATGCCCCAGAAG

Product: glycosyltransferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 266; Mature: 266

Protein sequence:

>349_residues
MIVPVKNEERVLPRLLDRLVNLEYDKSKYEIIVVEDGSTDRTFQICKEYEIKYNNLIRCYSLPRANVPNGKSRALNFALR
ISKGEIIGIFDGDTVPRLDILEYVEPKFEDITVGAVQGKLVPINVRESVTSRLAAIEELIYEYSIAGRAKVGLFVPIEGT
CSFIRKSIIMELGGWNEYSLTEDLDISLKIVNKGCKIVYSPTTISWREVPVSLRVLIRQRLRWYRGHLEVQLGKLRKIDL
RIIDGILIVLTPFFMVLNLVNYSLVLVYSSSLYIVAASLVSLASLLSLLLIILIARRHMIEYFYMIPSFVYMNFIVALNF
TAIFLELIRAPRVWVKTERSAKVTGEVMG

Sequences:

>Translated_266_residues
MIVPVKNEERVLPRLLDRLVNLEYDKSKYEIIVVEDGSTDRTFQICKEYEIKYNNLIRCYSLPRANVPNGKSRALNFALR
ISKGEIIGIFDGDTVPRLDILEYVEPKFEDITVGAVQGKLVPINVRESVTSRLAAIEELIYEYSIAGRAKVGLFVPIEGT
CSFIRKSIIMELGGWNEYSLTEDLDISLKIVNKGCKIVYSPTTISWREVPVSLRVLIRQRLRWYRGHLEVQLGKLRKIDL
RIIDGILIVLTPFFMVLNLVNYSLVL
>Mature_266_residues
MIVPVKNEERVLPRLLDRLVNLEYDKSKYEIIVVEDGSTDRTFQICKEYEIKYNNLIRCYSLPRANVPNGKSRALNFALR
ISKGEIIGIFDGDTVPRLDILEYVEPKFEDITVGAVQGKLVPINVRESVTSRLAAIEELIYEYSIAGRAKVGLFVPIEGT
CSFIRKSIIMELGGWNEYSLTEDLDISLKIVNKGCKIVYSPTTISWREVPVSLRVLIRQRLRWYRGHLEVQLGKLRKIDL
RIIDGILIVLTPFFMVLNLVNYSLVL

Specific function: Unknown

COG id: COG1215

COG function: function code M; Glycosyltransferases, probably involved in cell wall biogenesis

Gene ontology:

Cell location: Membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 2 family [H]

Homologues:

Organism=Escherichia coli, GI1787259, Length=246, Percent_Identity=31.3008130081301, Blast_Score=92, Evalue=3e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001173 [H]

Pfam domain/function: PF00535 Glycos_transf_2 [H]

EC number: NA

Molecular weight: Translated: 30508; Mature: 30508

Theoretical pI: Translated: 8.80; Mature: 8.80

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIVPVKNEERVLPRLLDRLVNLEYDKSKYEIIVVEDGSTDRTFQICKEYEIKYNNLIRCY
CEECCCCCCHHHHHHHHHHHCCCCCCCEEEEEEEECCCCCHHHHHHHHHCCCCCCEEEEE
SLPRANVPNGKSRALNFALRISKGEIIGIFDGDTVPRLDILEYVEPKFEDITVGAVQGKL
ECCCCCCCCCCHHEEEEEEEECCCCEEEEECCCCCCHHHHHHHCCCCCCEEEEEEECCEE
VPINVRESVTSRLAAIEELIYEYSIAGRAKVGLFVPIEGTCSFIRKSIIMELGGWNEYSL
EEEEHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEECHHHHHHHHHHHHHCCCCCCCCC
TEDLDISLKIVNKGCKIVYSPTTISWREVPVSLRVLIRQRLRWYRGHLEVQLGKLRKIDL
CCCCCEEEEEECCCCEEEECCCCCCHHHCCHHHHHHHHHHHHHHHCCEEEEECCEEEEHH
RIIDGILIVLTPFFMVLNLVNYSLVL
HHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MIVPVKNEERVLPRLLDRLVNLEYDKSKYEIIVVEDGSTDRTFQICKEYEIKYNNLIRCY
CEECCCCCCHHHHHHHHHHHCCCCCCCEEEEEEEECCCCCHHHHHHHHHCCCCCCEEEEE
SLPRANVPNGKSRALNFALRISKGEIIGIFDGDTVPRLDILEYVEPKFEDITVGAVQGKL
ECCCCCCCCCCHHEEEEEEEECCCCEEEEECCCCCCHHHHHHHCCCCCCEEEEEEECCEE
VPINVRESVTSRLAAIEELIYEYSIAGRAKVGLFVPIEGTCSFIRKSIIMELGGWNEYSL
EEEEHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEECHHHHHHHHHHHHHCCCCCCCCC
TEDLDISLKIVNKGCKIVYSPTTISWREVPVSLRVLIRQRLRWYRGHLEVQLGKLRKIDL
CCCCCEEEEEECCCCEEEECCCCCCHHHCCHHHHHHHHHHHHHHHCCEEEEECCEEEEHH
RIIDGILIVLTPFFMVLNLVNYSLVL
HHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9341680; 9384377 [H]