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The map label for this gene is 15928241

Identifier: 15928241

GI number: 15928241

Start: 2762612

End: 2763304

Strand: Reverse

Name: 15928241

Synonym: SA2448

Alternate gene names: NA

Gene position: 2763304-2762612 (Counterclockwise)

Preceding gene: 15928245

Following gene: 15928240

Centisome position: 98.17

GC content: 38.1

Gene sequence:

>693_bases
ATGAATTATTCGCCAAAACAAGGTGTAAGAAGTCATGGTTTACCGCACGACCCATTTAAAAGTAGTACAGTACCTCGTCC
AATAGGTTGGATTTCTACTGTATCGAAAGATGGGAAAGATAATTTAGCGCCTTATAGTCAGTATCAAAACTTAACTTGGG
ATCCGCCTATGGTTATGTTCGCAGCAAATCAATCTGTTCTTGGTGATCATGAGCGTAAAGATACAGTAAAAAATGCAGAA
GAGACAGGGTGGTTTGTATGGAACATGGCCACGTATGATTTAAGAGAAGCTGTTAATTTATCGTCGAAGGCACTACCACC
TGAAGAGGATGAATTTGAATATGCAGGTGTGACGAAAGAAGCATGTATAGAAGCACCAGGTTATCGAGTCAAAGAATCGC
CAGTACATTTTGAATGTGAGTACGTTCAAACGATTCGTATTCCGACAGGAGACCCAGTATCTACCGTAGATATTGTTATA
GGAAGAGTTGCCCAAGTTCATATTGACGATAAGGTTATTCTTGATAATGGTAAATTGGACATTAAGTCGATTAAACCTAT
TGCCAGATTAGGATATTACGATTACACAGTAGTGAATGAGATATTTGAAATGAAAGCACCTGCAGCTTCTAAAGAAGAGT
TAGCAGGTTTAGAAGGAAGAAATTTCGATAATCAATCAGATGAAAAGAGATAA

Upstream 100 bases:

>100_bases
ATATAGTTTCTACTTATAAATAAATTGTTTATTTATATTAGACGCTTATGTAAAGAGGGCGTAACCTTAAATGTAATTAC
TTATAAGGGGTGAAGATAGT

Downstream 100 bases:

>100_bases
GTAATTTAATCATTTTAGTGAATTCAATGCATTGTTACTAAATATTCAACTTAGTAGCGATGCATTTTTTCGCTTTATAA
ATGAAAATGTTAAAGCAATA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 230; Mature: 230

Protein sequence:

>230_residues
MNYSPKQGVRSHGLPHDPFKSSTVPRPIGWISTVSKDGKDNLAPYSQYQNLTWDPPMVMFAANQSVLGDHERKDTVKNAE
ETGWFVWNMATYDLREAVNLSSKALPPEEDEFEYAGVTKEACIEAPGYRVKESPVHFECEYVQTIRIPTGDPVSTVDIVI
GRVAQVHIDDKVILDNGKLDIKSIKPIARLGYYDYTVVNEIFEMKAPAASKEELAGLEGRNFDNQSDEKR

Sequences:

>Translated_230_residues
MNYSPKQGVRSHGLPHDPFKSSTVPRPIGWISTVSKDGKDNLAPYSQYQNLTWDPPMVMFAANQSVLGDHERKDTVKNAE
ETGWFVWNMATYDLREAVNLSSKALPPEEDEFEYAGVTKEACIEAPGYRVKESPVHFECEYVQTIRIPTGDPVSTVDIVI
GRVAQVHIDDKVILDNGKLDIKSIKPIARLGYYDYTVVNEIFEMKAPAASKEELAGLEGRNFDNQSDEKR
>Mature_230_residues
MNYSPKQGVRSHGLPHDPFKSSTVPRPIGWISTVSKDGKDNLAPYSQYQNLTWDPPMVMFAANQSVLGDHERKDTVKNAE
ETGWFVWNMATYDLREAVNLSSKALPPEEDEFEYAGVTKEACIEAPGYRVKESPVHFECEYVQTIRIPTGDPVSTVDIVI
GRVAQVHIDDKVILDNGKLDIKSIKPIARLGYYDYTVVNEIFEMKAPAASKEELAGLEGRNFDNQSDEKR

Specific function: Unknown

COG id: COG1853

COG function: function code R; Conserved protein/domain typically associated with flavoprotein oxygenases, DIM6/NTAB family

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the flavoredoxin family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002563
- InterPro:   IPR012349
- InterPro:   IPR009002 [H]

Pfam domain/function: PF01613 Flavin_Reduct [H]

EC number: NA

Molecular weight: Translated: 25867; Mature: 25867

Theoretical pI: Translated: 4.80; Mature: 4.80

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNYSPKQGVRSHGLPHDPFKSSTVPRPIGWISTVSKDGKDNLAPYSQYQNLTWDPPMVMF
CCCCCCCCHHHCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCHHHHCCCCCCCCEEEE
AANQSVLGDHERKDTVKNAEETGWFVWNMATYDLREAVNLSSKALPPEEDEFEYAGVTKE
ECCCCHHCCCHHHHHHCCHHHCCEEEEEEHHHHHHHHHCCHHCCCCCCCCCEEECCCCHH
ACIEAPGYRVKESPVHFECEYVQTIRIPTGDPVSTVDIVIGRVAQVHIDDKVILDNGKLD
HHHCCCCCCEECCCCEEEEEEEEEEECCCCCCCHHHHHHHHHHEEEEECCEEEEECCCEE
IKSIKPIARLGYYDYTVVNEIFEMKAPAASKEELAGLEGRNFDNQSDEKR
HHHCCHHHHHCCCHHHHHHHHHHHCCCCCCHHHHCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MNYSPKQGVRSHGLPHDPFKSSTVPRPIGWISTVSKDGKDNLAPYSQYQNLTWDPPMVMF
CCCCCCCCHHHCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCHHHHCCCCCCCCEEEE
AANQSVLGDHERKDTVKNAEETGWFVWNMATYDLREAVNLSSKALPPEEDEFEYAGVTKE
ECCCCHHCCCHHHHHHCCHHHCCEEEEEEHHHHHHHHHCCHHCCCCCCCCCEEECCCCHH
ACIEAPGYRVKESPVHFECEYVQTIRIPTGDPVSTVDIVIGRVAQVHIDDKVILDNGKLD
HHHCCCCCCEECCCCEEEEEEEEEEECCCCCCCHHHHHHHHHHEEEEECCEEEEECCCEE
IKSIKPIARLGYYDYTVVNEIFEMKAPAASKEELAGLEGRNFDNQSDEKR
HHHCCHHHHHCCCHHHHHHHHHHHCCCCCCHHHHCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9537320 [H]