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The map label for this gene is acrR [C]

Identifier: 15928157

GI number: 15928157

Start: 2654584

End: 2655141

Strand: Direct

Name: acrR [C]

Synonym: SA2364

Alternate gene names: 15928157

Gene position: 2654584-2655141 (Clockwise)

Preceding gene: 15928152

Following gene: 15928158

Centisome position: 94.31

GC content: 31.36

Gene sequence:

>558_bases
ATGCGAAAAGATGCAAAAGAGAATAGACAACGAATTGAAGAAATAGCGCACAAACTTTTTGATGAAGAAGGCGTTGAAAA
CATTAGTATGAATCGTATTGCTAAAGAACTAGGTATCGGTATGGGGACATTGTATCGACATTTCAAAGATAAAAGCGATT
TATGCTACTACGTCATACAAAGAGACCTTGATATTTTTATCACTCATTTTAAGCAAATTAAAGATGACTATCATTCTAAT
TATGAGGTTATGCAAGTGTCGTTAGATTATCTTTTACAATTTAAAATCGATAATAAGGCACTACTGCAATGTATTGAAGC
AGGCAACAATAAATTACGTTTTTACCAAAGCGCATTTTATCAAGAATTATTTGATTTTTATTATGACTTATTTAAAAGCG
ATGACGACACTTACACGAAGTTCAAAACAGATATGCTGTTGCAATCATTATCAACTAGTGTATTTGCCTTCCAAATAGAG
CATCGCCATATTTCAATTGAAGCGTACAGAAATTATTTATTAAACATTTATTTAGATGAGGTGGAACGTAATGACTAA

Upstream 100 bases:

>100_bases
ATAGTTATTGCAAATTCATTGCTAACTTTCTTAACACGTTTTATAATAAACGGATAGTTATCCGTTTGTCAATTTTAGAG
AATTTTAAGTAGGTGTAATC

Downstream 100 bases:

>100_bases
AATTGTGTTAATCACAGGAGGCAATAAAGGGTTAGGCTATGCAAGTGCAGAGGCACTTAAAGCATTGGGTTACAAAGTTT
ATATAGGTTCTCGGAATGAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 185; Mature: 185

Protein sequence:

>185_residues
MRKDAKENRQRIEEIAHKLFDEEGVENISMNRIAKELGIGMGTLYRHFKDKSDLCYYVIQRDLDIFITHFKQIKDDYHSN
YEVMQVSLDYLLQFKIDNKALLQCIEAGNNKLRFYQSAFYQELFDFYYDLFKSDDDTYTKFKTDMLLQSLSTSVFAFQIE
HRHISIEAYRNYLLNIYLDEVERND

Sequences:

>Translated_185_residues
MRKDAKENRQRIEEIAHKLFDEEGVENISMNRIAKELGIGMGTLYRHFKDKSDLCYYVIQRDLDIFITHFKQIKDDYHSN
YEVMQVSLDYLLQFKIDNKALLQCIEAGNNKLRFYQSAFYQELFDFYYDLFKSDDDTYTKFKTDMLLQSLSTSVFAFQIE
HRHISIEAYRNYLLNIYLDEVERND
>Mature_185_residues
MRKDAKENRQRIEEIAHKLFDEEGVENISMNRIAKELGIGMGTLYRHFKDKSDLCYYVIQRDLDIFITHFKQIKDDYHSN
YEVMQVSLDYLLQFKIDNKALLQCIEAGNNKLRFYQSAFYQELFDFYYDLFKSDDDTYTKFKTDMLLQSLSTSVFAFQIE
HRHISIEAYRNYLLNIYLDEVERND

Specific function: Potential Regulator Protein For The Acrab Genes. [C]

COG id: COG1309

COG function: function code K; Transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH tetR-type DNA-binding domain

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y2364_STAAN (Q7A3C7)

Other databases:

- EMBL:   BA000018
- PIR:   C90063
- RefSeq:   NP_375690.1
- ProteinModelPortal:   Q7A3C7
- STRING:   Q7A3C7
- EnsemblBacteria:   EBSTAT00000002032
- GeneID:   1125293
- GenomeReviews:   BA000018_GR
- KEGG:   sau:SA2364
- eggNOG:   COG1309
- GeneTree:   EBGT00050000025380
- HOGENOM:   HBG694083
- OMA:   HALMVTE
- ProtClustDB:   CLSK886085
- BioCyc:   SAUR158879:SA2364-MONOMER
- InterPro:   IPR009057
- InterPro:   IPR015893
- InterPro:   IPR001647
- Gene3D:   G3DSA:1.10.357.10
- PRINTS:   PR00455

Pfam domain/function: PF00440 TetR_N; SSF46689 Homeodomain_like

EC number: NA

Molecular weight: Translated: 22333; Mature: 22333

Theoretical pI: Translated: 5.13; Mature: 5.13

Prosite motif: PS01081 HTH_TETR_1; PS50977 HTH_TETR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRKDAKENRQRIEEIAHKLFDEEGVENISMNRIAKELGIGMGTLYRHFKDKSDLCYYVIQ
CCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCHHHHHHHHCCCCHHHHHHHH
RDLDIFITHFKQIKDDYHSNYEVMQVSLDYLLQFKIDNKALLQCIEAGNNKLRFYQSAFY
HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHEECCCCHHHHHHHHCCCCHHHHHHHHHH
QELFDFYYDLFKSDDDTYTKFKTDMLLQSLSTSVFAFQIEHRHISIEAYRNYLLNIYLDE
HHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHEEEEEECCEEHHHHHHHHHHHHHHHH
VERND
HCCCC
>Mature Secondary Structure
MRKDAKENRQRIEEIAHKLFDEEGVENISMNRIAKELGIGMGTLYRHFKDKSDLCYYVIQ
CCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCHHHHHHHHCCCCHHHHHHHH
RDLDIFITHFKQIKDDYHSNYEVMQVSLDYLLQFKIDNKALLQCIEAGNNKLRFYQSAFY
HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHEECCCCHHHHHHHHCCCCHHHHHHHHHH
QELFDFYYDLFKSDDDTYTKFKTDMLLQSLSTSVFAFQIEHRHISIEAYRNYLLNIYLDE
HHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHEEEEEECCEEHHHHHHHHHHHHHHHH
VERND
HCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11418146