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The map label for this gene is int

Identifier: 15927603

GI number: 15927603

Start: 2071100

End: 2072272

Strand: Direct

Name: int

Synonym: SA1835

Alternate gene names: 15927603

Gene position: 2071100-2072272 (Clockwise)

Preceding gene: 15927602

Following gene: 15927606

Centisome position: 73.58

GC content: 33.25

Gene sequence:

>1173_bases
ATGGCAAGTTATGAAAAACGCGGAAATACATGGCGCTATCGTATATCACTAGGAAAAGACGCAGAAACGGGCAAATATAA
ATATATTTCAAACTCAGGTTTTAAACGCAAATCAGACGCTAAACATCACGCTGAAATGGTTGAGCGTCAATTAAGAAATG
GCGATTATATCGCACCGTCCACATCTACATTTAAACAGGTTGCTGACGATTGGATATCACAATATGCTAACGAAGTAAAA
GTAAGTAGTGTCAGAGCACGCGAGAAAGCCATACATCATGCTATAGAACGCTTTAAGAACAAACCAATACAAACTATCAA
AAAACACGATTATCAACGTTTTGTAAACGATATAAGCATACAGTATAGCAAGAATTATGTTGATAGCATTGTAACCTCTA
CAAATATGATATTTAAGTACGCTTATGATATGAAATTAATAAGAATATTGCCTAGCGAGGGTATTAAACGACCTAAAAAG
AAAGTTAGTGTGGAAGAATTAGAAGATACTGAGATACATAAAAAGTTTCTTGAAAAAGATGAATTATTTCAATTTCTGGA
AATTGCCAAAAATCACCATTCGCCACAAAATAGCTTTGAAGTGTTTTATACATTAGCATATACAGGCATGCGTGCAGGTG
AATTATTGGCATTGAAGTGGTCTGATATAGACTTTGAGAATAACACAATCAATATTACAAAGACTTATTACAATCCGAAT
AACAATAAAAAGCAATATCAAATACTTACGCCAAAAACTGAAAGCTCAATCGGAAAAATTTCAGTTGATCCTCATGTGAT
TAAATTACTCAAAAATTATAAAGTGGATGTACAGGACACATGGAAAAACGAGTTGTATGTAGATAACAATTTCGTTTTTA
CTGATGTTAACGGCTATCCCCTCGTAATTAAGAAACTACAGTTATGGATAAAAGCTATACTTAAAAAGACTAACATAACT
AATAAACAAATAAGCACTCATTCATTTCGTCATACTCATTGCGCGTTACTTATAGAGGCTGGTGTGCATATTAAGGAAAT
ACAAGAACGCTTGCGACACAAAGATATAAACACCACTATGAACATCTACGCTAAGATTACGAACTCATACAAAAAAGACG
CTTCCCAAAAGTTTAGTAAACTCATGGAAAACGTCTCAAAAGATTTATTTTAA

Upstream 100 bases:

>100_bases
AATAAAGGCGAAAAAAGTACGACTCTACATAAAGAAATTTTACAAACTGATAGCCGTTTATCTAGTGATATTTTTAAAGA
ATATTAATCGAGGTGATCAA

Downstream 100 bases:

>100_bases
AATTTCTATGACCAAATTACGACCACCCAATATTACAAACTTTATAAAATCAGCGTTTAACAGTCGTTTTACATCATTCC
CGGCATGCCACCCATGTTAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 390; Mature: 389

Protein sequence:

>390_residues
MASYEKRGNTWRYRISLGKDAETGKYKYISNSGFKRKSDAKHHAEMVERQLRNGDYIAPSTSTFKQVADDWISQYANEVK
VSSVRAREKAIHHAIERFKNKPIQTIKKHDYQRFVNDISIQYSKNYVDSIVTSTNMIFKYAYDMKLIRILPSEGIKRPKK
KVSVEELEDTEIHKKFLEKDELFQFLEIAKNHHSPQNSFEVFYTLAYTGMRAGELLALKWSDIDFENNTINITKTYYNPN
NNKKQYQILTPKTESSIGKISVDPHVIKLLKNYKVDVQDTWKNELYVDNNFVFTDVNGYPLVIKKLQLWIKAILKKTNIT
NKQISTHSFRHTHCALLIEAGVHIKEIQERLRHKDINTTMNIYAKITNSYKKDASQKFSKLMENVSKDLF

Sequences:

>Translated_390_residues
MASYEKRGNTWRYRISLGKDAETGKYKYISNSGFKRKSDAKHHAEMVERQLRNGDYIAPSTSTFKQVADDWISQYANEVK
VSSVRAREKAIHHAIERFKNKPIQTIKKHDYQRFVNDISIQYSKNYVDSIVTSTNMIFKYAYDMKLIRILPSEGIKRPKK
KVSVEELEDTEIHKKFLEKDELFQFLEIAKNHHSPQNSFEVFYTLAYTGMRAGELLALKWSDIDFENNTINITKTYYNPN
NNKKQYQILTPKTESSIGKISVDPHVIKLLKNYKVDVQDTWKNELYVDNNFVFTDVNGYPLVIKKLQLWIKAILKKTNIT
NKQISTHSFRHTHCALLIEAGVHIKEIQERLRHKDINTTMNIYAKITNSYKKDASQKFSKLMENVSKDLF
>Mature_389_residues
ASYEKRGNTWRYRISLGKDAETGKYKYISNSGFKRKSDAKHHAEMVERQLRNGDYIAPSTSTFKQVADDWISQYANEVKV
SSVRAREKAIHHAIERFKNKPIQTIKKHDYQRFVNDISIQYSKNYVDSIVTSTNMIFKYAYDMKLIRILPSEGIKRPKKK
VSVEELEDTEIHKKFLEKDELFQFLEIAKNHHSPQNSFEVFYTLAYTGMRAGELLALKWSDIDFENNTINITKTYYNPNN
NKKQYQILTPKTESSIGKISVDPHVIKLLKNYKVDVQDTWKNELYVDNNFVFTDVNGYPLVIKKLQLWIKAILKKTNITN
KQISTHSFRHTHCALLIEAGVHIKEIQERLRHKDINTTMNIYAKITNSYKKDASQKFSKLMENVSKDLF

Specific function: Putative integrase that is involved in the insertion of the integrative and conjugative element ICEBs1. Required for the excision of ICEBs1 from the donor cell genome and subsequent integration in the recipient cell genome. Appears not to be transferred t

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the 'phage' integrase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011010
- InterPro:   IPR013762
- InterPro:   IPR002104
- InterPro:   IPR023109 [H]

Pfam domain/function: PF00589 Phage_integrase [H]

EC number: NA

Molecular weight: Translated: 45744; Mature: 45613

Theoretical pI: Translated: 10.08; Mature: 10.08

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MASYEKRGNTWRYRISLGKDAETGKYKYISNSGFKRKSDAKHHAEMVERQLRNGDYIAPS
CCCCCCCCCEEEEEEEECCCCCCCCEEEECCCCCCCCCCHHHHHHHHHHHHCCCCEECCC
TSTFKQVADDWISQYANEVKVSSVRAREKAIHHAIERFKNKPIQTIKKHDYQRFVNDISI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHEE
QYSKNYVDSIVTSTNMIFKYAYDMKLIRILPSEGIKRPKKKVSVEELEDTEIHKKFLEKD
EECHHHHHHHHHHHHHHHHHHHCEEEEEECCCHHCCCHHHHCCHHHHHHHHHHHHHHCHH
ELFQFLEIAKNHHSPQNSFEVFYTLAYTGMRAGELLALKWSDIDFENNTINITKTYYNPN
HHHHHHHHHHHCCCCCCCHHEEEEEECCCCCCCCEEEEEECCCCCCCCEEEEEEEEECCC
NNKKQYQILTPKTESSIGKISVDPHVIKLLKNYKVDVQDTWKNELYVDNNFVFTDVNGYP
CCCEEEEEECCCCCCCCCEEECCHHHHHHHHHCCCCEEECCCCCEEECCCEEEEECCCCH
LVIKKLQLWIKAILKKTNITNKQISTHSFRHTHCALLIEAGVHIKEIQERLRHKDINTTM
HHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHEEHHHCCCCHHHHHHHHHHCCCCCHH
NIYAKITNSYKKDASQKFSKLMENVSKDLF
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
ASYEKRGNTWRYRISLGKDAETGKYKYISNSGFKRKSDAKHHAEMVERQLRNGDYIAPS
CCCCCCCCEEEEEEEECCCCCCCCEEEECCCCCCCCCCHHHHHHHHHHHHCCCCEECCC
TSTFKQVADDWISQYANEVKVSSVRAREKAIHHAIERFKNKPIQTIKKHDYQRFVNDISI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHEE
QYSKNYVDSIVTSTNMIFKYAYDMKLIRILPSEGIKRPKKKVSVEELEDTEIHKKFLEKD
EECHHHHHHHHHHHHHHHHHHHCEEEEEECCCHHCCCHHHHCCHHHHHHHHHHHHHHCHH
ELFQFLEIAKNHHSPQNSFEVFYTLAYTGMRAGELLALKWSDIDFENNTINITKTYYNPN
HHHHHHHHHHHCCCCCCCHHEEEEEECCCCCCCCEEEEEECCCCCCCCEEEEEEEEECCC
NNKKQYQILTPKTESSIGKISVDPHVIKLLKNYKVDVQDTWKNELYVDNNFVFTDVNGYP
CCCEEEEEECCCCCCCCCEEECCHHHHHHHHHCCCCEEECCCCCEEECCCEEEEECCCCH
LVIKKLQLWIKAILKKTNITNKQISTHSFRHTHCALLIEAGVHIKEIQERLRHKDINTTM
HHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHEEHHHCCCCHHHHHHHHHHCCCCCHH
NIYAKITNSYKKDASQKFSKLMENVSKDLF
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]