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The map label for this gene is sufB [C]

Identifier: 15926506

GI number: 15926506

Start: 884238

End: 885635

Strand: Direct

Name: sufB [C]

Synonym: SA0778

Alternate gene names: 15926506

Gene position: 884238-885635 (Clockwise)

Preceding gene: 15926505

Following gene: 15926508

Centisome position: 31.41

GC content: 34.41

Gene sequence:

>1398_bases
ATGGCTAAAAAAGCACCTGATGTTGGGGATTATAAATATGGATTCCACGACGATGATGTATCCATTTTCAGATCAGAACG
TGGTTTAACTGAGAATATCGTTAGAGAAATTTCTAACATGAAAAATGAGCCGGAATGGATGTTAGATTTCCGTCTTAAAT
CATTAAAATTGTTTTATAAAATGCCAATGCCTCAATGGGGTGGCGACTTATCAGAATTGAATTTCGATGACATTACTTAC
TATGTAAAGCCTTCAGAACAAGCTGAACGTTCATGGGATGAAGTGCCAGAAGAAATTAAAAGAACTTTCGATAAATTAGG
AATTCCTGAAGCTGAACAAAAATATTTAGCTGGTGTTTCTGCTCAATATGAATCTGAAGTTGTTTACCATAATATGGAAA
AAGAACTTGAAGAAAAAGGTATTATCTTTAAAGATACAGATAGTGCTTTACAAGAAAATGAAGAATTATTCAAAAAATAC
TTTGCTTCTGTAGTACCTGCAGCAGATAACAAATTTGCGGCGTTAAACTCAGCAGTATGGTCAGGTGGTTCGTTCATTTA
TGTACCTAAAAATATCAAACTAGATACGCCACTACAAGCTTATTTCCGTATTAACTCTGAGAACATGGGTCAATTTGAAC
GTACATTAATCATTGCTGATGAAGGTGCTTCTGTACATTACGTAGAAGGTTGTACTGCACCAGTTTATACAACTAGTTCT
TTACACTCTGCTGTTGTGGAAATCATTGTGCATAAAGATGCGCACGTTCGTTATACTACGATTCAAAACTGGGCGAACAA
TGTATACAATTTAGTTACAAAACGTACTTTTGTTTATGAAAACGGAAATATGGAATGGGTAGATGGTAACTTAGGTTCTA
AGTTAACGATGAAATATCCAAACTGTGTTCTTTTAGGTGAAGGTGCAAAAGGTAGTACATTATCTATTGCATTTGCTGGT
AAAGGACAAGTTCAAGATGCCGGTGCTAAAATGATTCATAAAGCGCCAAATACATCTTCAACGATTGTTTCTAAATCTAT
TTCTAAAAATGGTGGTAAAGTTATTTATCGCGGTATTGTTCATTTTGGACGTAAAGCAAAAGGTGCTCGTTCAAATATTG
AATGTGATACATTAATCTTAGATAACGAATCAACATCAGATACAATTCCATATAACGAAGTATTCAACGATCAAATATCA
TTAGAACATGAAGCCAAGGTTTCAAAAGTTTCTGAAGAACAATTATTTTATCTAATGAGTCGTGGTATTTCTGAAGAAGA
AGCGACAGAAATGATTGTTATGGGATTCATCGAACCATTTACAAAAGAACTTCCAATGGAATACGCGGTCGAAATGAACC
GTTTAATCAAGTTCGAAATGGAAGGTAGTATTGGATAG

Upstream 100 bases:

>100_bases
AATTTTTATAAGATGTCATGTCATTGTTATAATATGGTTTACATCATGAATTAAAAACTTACGCACGCCGTTGTAAATAT
ATTTTTAAGGAGTGATTGAA

Downstream 100 bases:

>100_bases
CTTTAAACAGCGTTGTTAAGCCATTCTTGACTTCCGGAAATGGGTATTGATACCATTTTGATACTGAATATAACAAAAAG
CCACATTACTGTGGCTTTTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 465; Mature: 464

Protein sequence:

>465_residues
MAKKAPDVGDYKYGFHDDDVSIFRSERGLTENIVREISNMKNEPEWMLDFRLKSLKLFYKMPMPQWGGDLSELNFDDITY
YVKPSEQAERSWDEVPEEIKRTFDKLGIPEAEQKYLAGVSAQYESEVVYHNMEKELEEKGIIFKDTDSALQENEELFKKY
FASVVPAADNKFAALNSAVWSGGSFIYVPKNIKLDTPLQAYFRINSENMGQFERTLIIADEGASVHYVEGCTAPVYTTSS
LHSAVVEIIVHKDAHVRYTTIQNWANNVYNLVTKRTFVYENGNMEWVDGNLGSKLTMKYPNCVLLGEGAKGSTLSIAFAG
KGQVQDAGAKMIHKAPNTSSTIVSKSISKNGGKVIYRGIVHFGRKAKGARSNIECDTLILDNESTSDTIPYNEVFNDQIS
LEHEAKVSKVSEEQLFYLMSRGISEEEATEMIVMGFIEPFTKELPMEYAVEMNRLIKFEMEGSIG

Sequences:

>Translated_465_residues
MAKKAPDVGDYKYGFHDDDVSIFRSERGLTENIVREISNMKNEPEWMLDFRLKSLKLFYKMPMPQWGGDLSELNFDDITY
YVKPSEQAERSWDEVPEEIKRTFDKLGIPEAEQKYLAGVSAQYESEVVYHNMEKELEEKGIIFKDTDSALQENEELFKKY
FASVVPAADNKFAALNSAVWSGGSFIYVPKNIKLDTPLQAYFRINSENMGQFERTLIIADEGASVHYVEGCTAPVYTTSS
LHSAVVEIIVHKDAHVRYTTIQNWANNVYNLVTKRTFVYENGNMEWVDGNLGSKLTMKYPNCVLLGEGAKGSTLSIAFAG
KGQVQDAGAKMIHKAPNTSSTIVSKSISKNGGKVIYRGIVHFGRKAKGARSNIECDTLILDNESTSDTIPYNEVFNDQIS
LEHEAKVSKVSEEQLFYLMSRGISEEEATEMIVMGFIEPFTKELPMEYAVEMNRLIKFEMEGSIG
>Mature_464_residues
AKKAPDVGDYKYGFHDDDVSIFRSERGLTENIVREISNMKNEPEWMLDFRLKSLKLFYKMPMPQWGGDLSELNFDDITYY
VKPSEQAERSWDEVPEEIKRTFDKLGIPEAEQKYLAGVSAQYESEVVYHNMEKELEEKGIIFKDTDSALQENEELFKKYF
ASVVPAADNKFAALNSAVWSGGSFIYVPKNIKLDTPLQAYFRINSENMGQFERTLIIADEGASVHYVEGCTAPVYTTSSL
HSAVVEIIVHKDAHVRYTTIQNWANNVYNLVTKRTFVYENGNMEWVDGNLGSKLTMKYPNCVLLGEGAKGSTLSIAFAGK
GQVQDAGAKMIHKAPNTSSTIVSKSISKNGGKVIYRGIVHFGRKAKGARSNIECDTLILDNESTSDTIPYNEVFNDQISL
EHEAKVSKVSEEQLFYLMSRGISEEEATEMIVMGFIEPFTKELPMEYAVEMNRLIKFEMEGSIG

Specific function: Unknown

COG id: COG0719

COG function: function code O; ABC-type transport system involved in Fe-S cluster assembly, permease component

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0051 (ycf24) family [H]

Homologues:

Organism=Escherichia coli, GI87081955, Length=478, Percent_Identity=41.6317991631799, Blast_Score=379, Evalue=1e-106,
Organism=Escherichia coli, GI1787971, Length=154, Percent_Identity=26.6233766233766, Blast_Score=74, Evalue=2e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010231
- InterPro:   IPR000825 [H]

Pfam domain/function: PF01458 UPF0051 [H]

EC number: NA

Molecular weight: Translated: 52532; Mature: 52401

Theoretical pI: Translated: 4.81; Mature: 4.81

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAKKAPDVGDYKYGFHDDDVSIFRSERGLTENIVREISNMKNEPEWMLDFRLKSLKLFYK
CCCCCCCCCCCCCCCCCCCHHHHHHCCCCHHHHHHHHHCCCCCCCCEEHHHHHHHHHHHC
MPMPQWGGDLSELNFDDITYYVKPSEQAERSWDEVPEEIKRTFDKLGIPEAEQKYLAGVS
CCCCCCCCCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCC
AQYESEVVYHNMEKELEEKGIIFKDTDSALQENEELFKKYFASVVPAADNKFAALNSAVW
CCCCCHHHHHHHHHHHHHCCCEEECCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHC
SGGSFIYVPKNIKLDTPLQAYFRINSENMGQFERTLIIADEGASVHYVEGCTAPVYTTSS
CCCCEEEECCCCEECCCCEEEEEECCCCCCCEEEEEEEEECCCEEEEECCCCCCEEECHH
LHSAVVEIIVHKDAHVRYTTIQNWANNVYNLVTKRTFVYENGNMEWVDGNLGSKLTMKYP
HHHHHHHHHEECCCCEEEEEHHHHHHHHHHHHHCEEEEEECCCEEEEECCCCCEEEEECC
NCVLLGEGAKGSTLSIAFAGKGQVQDAGAKMIHKAPNTSSTIVSKSISKNGGKVIYRGIV
CEEEEECCCCCCEEEEEECCCCCCCHHHHHHHHCCCCCCHHHHHHHHCCCCCEEEEEHHH
HFGRKAKGARSNIECDTLILDNESTSDTIPYNEVFNDQISLEHEAKVSKVSEEQLFYLMS
HHCCCCCCCCCCCCEEEEEECCCCCCCCCCHHHHCCCCCCCCHHHHHHHHHHHHHHHHHH
RGISEEEATEMIVMGFIEPFTKELPMEYAVEMNRLIKFEMEGSIG
CCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHEEEEEECCCCC
>Mature Secondary Structure 
AKKAPDVGDYKYGFHDDDVSIFRSERGLTENIVREISNMKNEPEWMLDFRLKSLKLFYK
CCCCCCCCCCCCCCCCCCHHHHHHCCCCHHHHHHHHHCCCCCCCCEEHHHHHHHHHHHC
MPMPQWGGDLSELNFDDITYYVKPSEQAERSWDEVPEEIKRTFDKLGIPEAEQKYLAGVS
CCCCCCCCCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCC
AQYESEVVYHNMEKELEEKGIIFKDTDSALQENEELFKKYFASVVPAADNKFAALNSAVW
CCCCCHHHHHHHHHHHHHCCCEEECCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHC
SGGSFIYVPKNIKLDTPLQAYFRINSENMGQFERTLIIADEGASVHYVEGCTAPVYTTSS
CCCCEEEECCCCEECCCCEEEEEECCCCCCCEEEEEEEEECCCEEEEECCCCCCEEECHH
LHSAVVEIIVHKDAHVRYTTIQNWANNVYNLVTKRTFVYENGNMEWVDGNLGSKLTMKYP
HHHHHHHHHEECCCCEEEEEHHHHHHHHHHHHHCEEEEEECCCEEEEECCCCCEEEEECC
NCVLLGEGAKGSTLSIAFAGKGQVQDAGAKMIHKAPNTSSTIVSKSISKNGGKVIYRGIV
CEEEEECCCCCCEEEEEECCCCCCCHHHHHHHHCCCCCCHHHHHHHHCCCCCEEEEEHHH
HFGRKAKGARSNIECDTLILDNESTSDTIPYNEVFNDQISLEHEAKVSKVSEEQLFYLMS
HHCCCCCCCCCCCCEEEEEECCCCCCCCCCHHHHCCCCCCCCHHHHHHHHHHHHHHHHHH
RGISEEEATEMIVMGFIEPFTKELPMEYAVEMNRLIKFEMEGSIG
CCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHEEEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA