Click here to switch to the map view.

The map label for this gene is ywoC [H]

Identifier: 15925891

GI number: 15925891

Start: 212277

End: 212774

Strand: Reverse

Name: ywoC [H]

Synonym: SA0181

Alternate gene names: 15925891

Gene position: 212774-212277 (Counterclockwise)

Preceding gene: 15925892

Following gene: 15925890

Centisome position: 7.56

GC content: 35.94

Gene sequence:

>498_bases
ATGGATTATGCGCCACATACAGCTGAAAATGTCGTTCAAAACGCTAATAAATTAATAGATGTTTTTAGAAAAAACAATGG
CTTTATCGCTTTTGTTCGCGTGAATTTCTATGATGGTAAAGATGTATTGCAACCAAATGCAATGATCTCATTACCACCAA
AAGAAGGCGACGACTACAGTCGTTTCCATCATTTATTAGACAAGAGAGATGACGATTTTGTCATAGACAAACGACATTTT
AGTGCATTTGTAGGAACAGATTTGGACTTACAATTGCGACGTCGAGGAATTGATACGATTGTTCTTGGTGGTGTCGCAAC
GCATATTGGCGTAGATACGACAGCGCGAGATGCCTATCAATTAAACTACAATCAGTTTTTTGTTACAGATATGATGAGTG
CACAAAACGAAACGCTACATCAATTTCCAATAGATAATGTATTCCCATTAATGGGACAAACAATAACTACAAACGACTTT
CTAAATATATTGAACTAA

Upstream 100 bases:

>100_bases
AAGCGAATACTTTATTAAACGAAAAGGACTCTGATATAAGATGATTAATTTTAATAAAACCGCTTTAGTGTTAATCGACC
TGCAAGAAGGTATACTTAAG

Downstream 100 bases:

>100_bases
ACATACACTTACCCCCTTCGATCATGTTGAAGGGGGTATCTTTATTTTACAAAGTATTAATACGTCGGGTTGTCTAACCT
CCTATCTATAAACTTAGCCT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 165; Mature: 165

Protein sequence:

>165_residues
MDYAPHTAENVVQNANKLIDVFRKNNGFIAFVRVNFYDGKDVLQPNAMISLPPKEGDDYSRFHHLLDKRDDDFVIDKRHF
SAFVGTDLDLQLRRRGIDTIVLGGVATHIGVDTTARDAYQLNYNQFFVTDMMSAQNETLHQFPIDNVFPLMGQTITTNDF
LNILN

Sequences:

>Translated_165_residues
MDYAPHTAENVVQNANKLIDVFRKNNGFIAFVRVNFYDGKDVLQPNAMISLPPKEGDDYSRFHHLLDKRDDDFVIDKRHF
SAFVGTDLDLQLRRRGIDTIVLGGVATHIGVDTTARDAYQLNYNQFFVTDMMSAQNETLHQFPIDNVFPLMGQTITTNDF
LNILN
>Mature_165_residues
MDYAPHTAENVVQNANKLIDVFRKNNGFIAFVRVNFYDGKDVLQPNAMISLPPKEGDDYSRFHHLLDKRDDDFVIDKRHF
SAFVGTDLDLQLRRRGIDTIVLGGVATHIGVDTTARDAYQLNYNQFFVTDMMSAQNETLHQFPIDNVFPLMGQTITTNDF
LNILN

Specific function: Unknown

COG id: COG1335

COG function: function code Q; Amidases related to nicotinamidase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the isochorismatase family [H]

Homologues:

Organism=Escherichia coli, GI87081992, Length=166, Percent_Identity=38.5542168674699, Blast_Score=116, Evalue=7e-28,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016291
- InterPro:   IPR000868 [H]

Pfam domain/function: PF00857 Isochorismatase [H]

EC number: NA

Molecular weight: Translated: 18869; Mature: 18869

Theoretical pI: Translated: 5.16; Mature: 5.16

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDYAPHTAENVVQNANKLIDVFRKNNGFIAFVRVNFYDGKDVLQPNAMISLPPKEGDDYS
CCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEEEEEEECCCCCCCCCCEEEECCCCCCHHH
RFHHLLDKRDDDFVIDKRHFSAFVGTDLDLQLRRRGIDTIVLGGVATHIGVDTTARDAYQ
HHHHHHCCCCCCEEEEHHHHHHHHCCCCCHHHHHCCCCEEEECCCHHHCCCCCCCCCEEE
LNYNQFFVTDMMSAQNETLHQFPIDNVFPLMGQTITTNDFLNILN
ECCCEEEEHHHHHCCCCCHHHCCCCCHHHHCCCEECCHHHHHHCC
>Mature Secondary Structure
MDYAPHTAENVVQNANKLIDVFRKNNGFIAFVRVNFYDGKDVLQPNAMISLPPKEGDDYS
CCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEEEEEEECCCCCCCCCCEEEECCCCCCHHH
RFHHLLDKRDDDFVIDKRHFSAFVGTDLDLQLRRRGIDTIVLGGVATHIGVDTTARDAYQ
HHHHHHCCCCCCEEEEHHHHHHHHCCCCCHHHHHCCCCEEEECCCHHHCCCCCCCCCEEE
LNYNQFFVTDMMSAQNETLHQFPIDNVFPLMGQTITTNDFLNILN
ECCCEEEEHHHHHCCCCCHHHCCCCCHHHHCCCEECCHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9353933; 9384377 [H]