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The map label for this gene is yhfR [C]

Identifier: 15925839

GI number: 15925839

Start: 149935

End: 150675

Strand: Reverse

Name: yhfR [C]

Synonym: SA0130

Alternate gene names: 15925839

Gene position: 150675-149935 (Counterclockwise)

Preceding gene: 15925844

Following gene: 15925831

Centisome position: 5.35

GC content: 35.63

Gene sequence:

>741_bases
GTGACGCAAACACAACCAAAATTTTTAACGATTTATAATACGTTATATAAAGAAATTCAAATAGGAAAATATCCGAGTGG
CCATGCATTACCTACTGAAAAGGAACTTTGTGCGCGCTTTGATGTCAGTCGTATGACTTTGCGCCAAGCTATAAAATTGT
TAGCCGAAGATGGCATCGTAGAGAGTACAAGAGGGAAGGGACACTTTGTTATTCCACAAACAAATGCCCAACACGCTTCA
AGTATGGATCAATTTAAGCATCCACTTGATCAAATATTGCTAGCTCGCGTATCTATGTCATCAATTAATTATCGTGTTGA
TTTAGAAAGTGAATATACAAATCATTTGTTTGCAAACCATCCTTCTGCCGTCATTGCAATGGAACGCTATTATCAAAAAA
AGGACAATCATTCTAAGCAAGCTGATGCATTTTGCTTTACCTTTATACCGTTAAATGTCATTGACACATTTAAAGTGAAT
ACACAAAACGAAGACGACATGAAGACATTCGTTGAGCAAACGATTTATAGCAATGCATATCAATCAGATTTAAAAATGTC
TATTACCAAAGCGCCCCGCTTCAAAAATCATAGTCACGTGTTTGATGGTGATACACATTGTTGGCTGATTATTGAAACAC
TGTACGCACAAACACCTTATCCAATTATGATTAATAAGTGGTATATTCCACAGGAAATATCTGAATTAACACTGACACGT
ATAAGACAATCGGATTATTAA

Upstream 100 bases:

>100_bases
TTTCAAAGCCTATCTATATTTAATTTTTATAATTTTTCCAATTCGAGTAAAAATTATTGTATGATGAGAGTGATTAAGTA
ACTTTATGGAGGTTGTCTAC

Downstream 100 bases:

>100_bases
AATTATTAAAATATAAGAAATTTTTTGATGACTATTTAGGGAGTTGGTAAGAAATGGAAAAGCTTGTTACAAGCGCAATT
TCATTCAGTCAACTACTGCC

Product: hypothetical protein

Products: NA

Alternate protein names: Transcriptional Regulatory Protein; GntR Family Transcriptional Regulator; Transcriptional Regulator GntR Family; Transcription Regulator; Histidine Utilization Repressor; GntR Family Regulatory Protein; Regulatory Protein GntR HTH

Number of amino acids: Translated: 246; Mature: 245

Protein sequence:

>246_residues
MTQTQPKFLTIYNTLYKEIQIGKYPSGHALPTEKELCARFDVSRMTLRQAIKLLAEDGIVESTRGKGHFVIPQTNAQHAS
SMDQFKHPLDQILLARVSMSSINYRVDLESEYTNHLFANHPSAVIAMERYYQKKDNHSKQADAFCFTFIPLNVIDTFKVN
TQNEDDMKTFVEQTIYSNAYQSDLKMSITKAPRFKNHSHVFDGDTHCWLIIETLYAQTPYPIMINKWYIPQEISELTLTR
IRQSDY

Sequences:

>Translated_246_residues
MTQTQPKFLTIYNTLYKEIQIGKYPSGHALPTEKELCARFDVSRMTLRQAIKLLAEDGIVESTRGKGHFVIPQTNAQHAS
SMDQFKHPLDQILLARVSMSSINYRVDLESEYTNHLFANHPSAVIAMERYYQKKDNHSKQADAFCFTFIPLNVIDTFKVN
TQNEDDMKTFVEQTIYSNAYQSDLKMSITKAPRFKNHSHVFDGDTHCWLIIETLYAQTPYPIMINKWYIPQEISELTLTR
IRQSDY
>Mature_245_residues
TQTQPKFLTIYNTLYKEIQIGKYPSGHALPTEKELCARFDVSRMTLRQAIKLLAEDGIVESTRGKGHFVIPQTNAQHASS
MDQFKHPLDQILLARVSMSSINYRVDLESEYTNHLFANHPSAVIAMERYYQKKDNHSKQADAFCFTFIPLNVIDTFKVNT
QNEDDMKTFVEQTIYSNAYQSDLKMSITKAPRFKNHSHVFDGDTHCWLIIETLYAQTPYPIMINKWYIPQEISELTLTRI
RQSDY

Specific function: Unknown

COG id: COG2188

COG function: function code K; Transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 28601; Mature: 28470

Theoretical pI: Translated: 7.34; Mature: 7.34

Prosite motif: PS50949 HTH_GNTR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTQTQPKFLTIYNTLYKEIQIGKYPSGHALPTEKELCARFDVSRMTLRQAIKLLAEDGIV
CCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHCHHHHHHHHHHHHHHHCCCE
ESTRGKGHFVIPQTNAQHASSMDQFKHPLDQILLARVSMSSINYRVDLESEYTNHLFANH
ECCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCEEEEEECCCHHHHHHCCC
PSAVIAMERYYQKKDNHSKQADAFCFTFIPLNVIDTFKVNTQNEDDMKTFVEQTIYSNAY
CHHHHHHHHHHHHHCCCCCHHCEEEEEEEEECEEEEEEECCCCHHHHHHHHHHHHHHHHH
QSDLKMSITKAPRFKNHSHVFDGDTHCWLIIETLYAQTPYPIMINKWYIPQEISELTLTR
HHHHEEEEECCCCCCCCCEEECCCCEEEEEEEHHHCCCCCCEEEEEEECHHHHHHHHHHH
IRQSDY
HHHCCC
>Mature Secondary Structure 
TQTQPKFLTIYNTLYKEIQIGKYPSGHALPTEKELCARFDVSRMTLRQAIKLLAEDGIV
CCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHCHHHHHHHHHHHHHHHCCCE
ESTRGKGHFVIPQTNAQHASSMDQFKHPLDQILLARVSMSSINYRVDLESEYTNHLFANH
ECCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCEEEEEECCCHHHHHHCCC
PSAVIAMERYYQKKDNHSKQADAFCFTFIPLNVIDTFKVNTQNEDDMKTFVEQTIYSNAY
CHHHHHHHHHHHHHCCCCCHHCEEEEEEEEECEEEEEEECCCCHHHHHHHHHHHHHHHHH
QSDLKMSITKAPRFKNHSHVFDGDTHCWLIIETLYAQTPYPIMINKWYIPQEISELTLTR
HHHHEEEEECCCCCCCCCEEECCCCEEEEEEEHHHCCCCCCEEEEEEECHHHHHHHHHHH
IRQSDY
HHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA