Click here to switch to the map view.

The map label for this gene is yuxL [H]

Identifier: 16127953

GI number: 16127953

Start: 3978261

End: 3980264

Strand: Direct

Name: yuxL [H]

Synonym: CC_3723

Alternate gene names: 16127953

Gene position: 3978261-3980264 (Clockwise)

Preceding gene: 16127952

Following gene: 16127957

Centisome position: 99.04

GC content: 63.62

Gene sequence:

>2004_bases
ATGCTTAGCCGTCGCGCCATTGTCGCGTCGGGCGTTTTCGCGCCCGCGCTGGCCAGCTTTTCGATCGCTAGGGCTCAGGC
CTCACCTCACACCATCGAGGAACTCAGCGCGCCGCCGGTCGACCGCGATGCGGCGCTGTCTCCGAACGGCAAGTTCATCG
CCTTGGCGTCAACGCGTCGGATCGACGAGAACAAGGATGACTCCAGCATCACGATCATCCCGGCCGACAATCCCGAGAAG
ACCCTGACGGTGCTGCCGCTCGGCGATCGAGATATCGCAAACGTCACCTGGGCCAGTGACCGCCGCCTGCTCATCACCCT
GGTGATCCCCCTGCGACGCGGCGGGCCGTCCATCGGGACTCGCCTCGCCTCGACATCAGATCCGGACGAGCGGCCGAAGG
CGCGCCGGGTTCTGGCCATCGACATGGACGGCAAGAACAGTGTCATGCTCTTCGGTAACGATCAGATGCTGCGCGAGGTG
CCGGACCTGGGGGACATCGTTGACCTTTTGCCCGATGATCCCGACCACATCCTGGTCAAGGCCGCCAACTTCAGCGCTGG
GATTTATTGCCTCTACAAGGTCAACATCCTGACCGGTGAACCGGAGCTCTTCGAGCGCGGCACGCTAAAGACCCGGCGCT
GGTTGACCCAAGCCGGCGTTCCGGTTGTCCGCTATGACTACAATGATCGCGGCACCGTTCAGACGATTTATGTCCGGGCG
CCGGGAGAGGCGGCGTGGCGGTTCTTCCGCAAGCTACGCGGCGATCAGCAATCGAAGGCCGAGTTCGAGTTCATAGGCGC
AGCGCCGCAGCCCGGCGTGATCCTGGCGCTCGCGCCCCAGGGCGACGATGGGGCGCTGGCGCTACGCGAGTTTGATCTGC
GCACCCTGGCCCTGGGCAAGACCCTGGCCAGCAAACCCAATCGCGACGCCGAATGGGTTTTGCGAAGCCGCAAGGGCGAG
CTTATGGGCGTGGCCTTCATCGAGGATCGCCTGACCTACCAATTCACCGATCCGCGCATGGAGTCGGTCTATCGCGGCCT
CAACCGTTACCTCGGCGATGTCTGCAACATTCGCATTTTCGATATCAGCGACGACGGCATGCGCTTCCTGGCGCGCGTCA
CCGGTCCCCGTGAACCTGGAACGCTCTATTTCTATGACCGTGTGACAAAGCGCTTCGACGGGATCGGCCAAGCCTATCCG
ACGCTGACGCCCGAGCGCCTGGCGCCCATGGAGACCCTCAGCGTCCGCACCCGCGACGGTGCGACGATCACCGCCTATCT
GACCATTCCGCTGGCGCCTGGCCCCCGGCCCCTGGTCGTGTTTCCGCACGGTGGACCGGAACTGCGCGACCACTACGATT
ATCAGACCTTTGTCCAGGTTCTGGCCGCGCAGGGCTGGTTGGTGTTGCAGCCCAATTTCAGGGGCTCAGGCGGCTACGGG
AAGGCGTTCGCCGACGCCGGTCGCAAGCGCTGGGGCGACCGGATGCAGGAAGACCTCGAGGACGCCGTGGCGCATGTCCT
GGCCAGCGGGCGCGCTGATCCAAAGCGTGTGGCCATCGCCGGCGCGAGTTACGGCGGCTATGCGGCGCTGCAGGGCGCCG
TCCGCAATCCAGATCTCTACAAGGCCGTGGTGTCCATCGCAGGGGACTGCGATCTGGTGGAGTCGATCGCCTTTTCCAGG
ATGCAGGACGGGCCCGATTCACCCTCCTATCTCTATTGGTTGGAGACAATCGGAGACCCCGCCAAGGATCGCGACATGCT
GAGAGCCGCTTCGCCGGCCTTGCACGCCGAAAAGGTGCGAGCGCCGGTGCTGCTGATCCACGGTCTGGAGGACGTGATCG
TTGCGCCCAAACAATCACGAATCATGCAGAGCGCTCTGAAATCGGCGGGAAAGTCGGTCGAACTGATCGAGTTGAAGGAC
GTGGGCCACCGCGATTTGCGTGAGGAGCATTGGAATCTCGTCTACTCGCGAACCGTCCAACACATCGCCAAGGCCTTAGC
CTGA

Upstream 100 bases:

>100_bases
TGTAGACGCGGCCTTAGCGCCTTCGCGCCGCCGACGATCGAGACACTTGCTTGTGGCGACTTCCCTCAATACGCTCGCCT
GAGTTGAGGGGGACAGAGCC

Downstream 100 bases:

>100_bases
CGCCTCACCCGCGCATATCGCCGGTCTCGATAAACCGCTGGTGCCAGGCGAAGGCTTCCATCAGCAGGGTCGGCGACTGC
TGGCCGTAGGAGTCGCGGCG

Product: prolyl oligopeptidase family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 667; Mature: 667

Protein sequence:

>667_residues
MLSRRAIVASGVFAPALASFSIARAQASPHTIEELSAPPVDRDAALSPNGKFIALASTRRIDENKDDSSITIIPADNPEK
TLTVLPLGDRDIANVTWASDRRLLITLVIPLRRGGPSIGTRLASTSDPDERPKARRVLAIDMDGKNSVMLFGNDQMLREV
PDLGDIVDLLPDDPDHILVKAANFSAGIYCLYKVNILTGEPELFERGTLKTRRWLTQAGVPVVRYDYNDRGTVQTIYVRA
PGEAAWRFFRKLRGDQQSKAEFEFIGAAPQPGVILALAPQGDDGALALREFDLRTLALGKTLASKPNRDAEWVLRSRKGE
LMGVAFIEDRLTYQFTDPRMESVYRGLNRYLGDVCNIRIFDISDDGMRFLARVTGPREPGTLYFYDRVTKRFDGIGQAYP
TLTPERLAPMETLSVRTRDGATITAYLTIPLAPGPRPLVVFPHGGPELRDHYDYQTFVQVLAAQGWLVLQPNFRGSGGYG
KAFADAGRKRWGDRMQEDLEDAVAHVLASGRADPKRVAIAGASYGGYAALQGAVRNPDLYKAVVSIAGDCDLVESIAFSR
MQDGPDSPSYLYWLETIGDPAKDRDMLRAASPALHAEKVRAPVLLIHGLEDVIVAPKQSRIMQSALKSAGKSVELIELKD
VGHRDLREEHWNLVYSRTVQHIAKALA

Sequences:

>Translated_667_residues
MLSRRAIVASGVFAPALASFSIARAQASPHTIEELSAPPVDRDAALSPNGKFIALASTRRIDENKDDSSITIIPADNPEK
TLTVLPLGDRDIANVTWASDRRLLITLVIPLRRGGPSIGTRLASTSDPDERPKARRVLAIDMDGKNSVMLFGNDQMLREV
PDLGDIVDLLPDDPDHILVKAANFSAGIYCLYKVNILTGEPELFERGTLKTRRWLTQAGVPVVRYDYNDRGTVQTIYVRA
PGEAAWRFFRKLRGDQQSKAEFEFIGAAPQPGVILALAPQGDDGALALREFDLRTLALGKTLASKPNRDAEWVLRSRKGE
LMGVAFIEDRLTYQFTDPRMESVYRGLNRYLGDVCNIRIFDISDDGMRFLARVTGPREPGTLYFYDRVTKRFDGIGQAYP
TLTPERLAPMETLSVRTRDGATITAYLTIPLAPGPRPLVVFPHGGPELRDHYDYQTFVQVLAAQGWLVLQPNFRGSGGYG
KAFADAGRKRWGDRMQEDLEDAVAHVLASGRADPKRVAIAGASYGGYAALQGAVRNPDLYKAVVSIAGDCDLVESIAFSR
MQDGPDSPSYLYWLETIGDPAKDRDMLRAASPALHAEKVRAPVLLIHGLEDVIVAPKQSRIMQSALKSAGKSVELIELKD
VGHRDLREEHWNLVYSRTVQHIAKALA
>Mature_667_residues
MLSRRAIVASGVFAPALASFSIARAQASPHTIEELSAPPVDRDAALSPNGKFIALASTRRIDENKDDSSITIIPADNPEK
TLTVLPLGDRDIANVTWASDRRLLITLVIPLRRGGPSIGTRLASTSDPDERPKARRVLAIDMDGKNSVMLFGNDQMLREV
PDLGDIVDLLPDDPDHILVKAANFSAGIYCLYKVNILTGEPELFERGTLKTRRWLTQAGVPVVRYDYNDRGTVQTIYVRA
PGEAAWRFFRKLRGDQQSKAEFEFIGAAPQPGVILALAPQGDDGALALREFDLRTLALGKTLASKPNRDAEWVLRSRKGE
LMGVAFIEDRLTYQFTDPRMESVYRGLNRYLGDVCNIRIFDISDDGMRFLARVTGPREPGTLYFYDRVTKRFDGIGQAYP
TLTPERLAPMETLSVRTRDGATITAYLTIPLAPGPRPLVVFPHGGPELRDHYDYQTFVQVLAAQGWLVLQPNFRGSGGYG
KAFADAGRKRWGDRMQEDLEDAVAHVLASGRADPKRVAIAGASYGGYAALQGAVRNPDLYKAVVSIAGDCDLVESIAFSR
MQDGPDSPSYLYWLETIGDPAKDRDMLRAASPALHAEKVRAPVLLIHGLEDVIVAPKQSRIMQSALKSAGKSVELIELKD
VGHRDLREEHWNLVYSRTVQHIAKALA

Specific function: Unknown

COG id: COG1506

COG function: function code E; Dipeptidyl aminopeptidases/acylaminoacyl-peptidases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase S9B family [H]

Homologues:

Organism=Homo sapiens, GI23510451, Length=204, Percent_Identity=28.921568627451, Blast_Score=72, Evalue=2e-12,
Organism=Caenorhabditis elegans, GI25144537, Length=321, Percent_Identity=30.2180685358255, Blast_Score=137, Evalue=2e-32,
Organism=Caenorhabditis elegans, GI25144540, Length=321, Percent_Identity=30.2180685358255, Blast_Score=136, Evalue=4e-32,
Organism=Caenorhabditis elegans, GI25144543, Length=221, Percent_Identity=32.1266968325792, Blast_Score=120, Evalue=3e-27,
Organism=Caenorhabditis elegans, GI17552908, Length=207, Percent_Identity=27.0531400966184, Blast_Score=92, Evalue=1e-18,
Organism=Caenorhabditis elegans, GI25149159, Length=222, Percent_Identity=31.981981981982, Blast_Score=89, Evalue=6e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011042
- InterPro:   IPR011659
- InterPro:   IPR001375 [H]

Pfam domain/function: PF07676 PD40; PF00326 Peptidase_S9 [H]

EC number: NA

Molecular weight: Translated: 73540; Mature: 73540

Theoretical pI: Translated: 7.69; Mature: 7.69

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLSRRAIVASGVFAPALASFSIARAQASPHTIEELSAPPVDRDAALSPNGKFIALASTRR
CCCCCEEHCCCHHHHHHHHHHHHHCCCCCCHHHHCCCCCCCCCCCCCCCCCEEEEEECCC
IDENKDDSSITIIPADNPEKTLTVLPLGDRDIANVTWASDRRLLITLVIPLRRGGPSIGT
CCCCCCCCEEEEEECCCCCCEEEEEECCCCCCCEEEECCCCEEEEEEEEEECCCCCHHHC
RLASTSDPDERPKARRVLAIDMDGKNSVMLFGNDQMLREVPDLGDIVDLLPDDPDHILVK
CCCCCCCCCCCCCCCEEEEEEECCCCEEEEECCCHHHHHCCCHHHHHHHCCCCCCEEEEE
AANFSAGIYCLYKVNILTGEPELFERGTLKTRRWLTQAGVPVVRYDYNDRGTVQTIYVRA
EECCCCCEEEEEEEEEEECCHHHHHCCCCHHHHHHHHCCCEEEEEECCCCCCEEEEEEEC
PGEAAWRFFRKLRGDQQSKAEFEFIGAAPQPGVILALAPQGDDGALALREFDLRTLALGK
CCHHHHHHHHHHCCCCCCCCCEEEECCCCCCCEEEEECCCCCCCEEEEEECCCHHHHHHH
TLASKPNRDAEWVLRSRKGELMGVAFIEDRLTYQFTDPRMESVYRGLNRYLGDVCNIRIF
HHHCCCCCCHHHHHHCCCCCEEEEEEEECCCEEEECCHHHHHHHHHHHHHHCHHHEEEEE
DISDDGMRFLARVTGPREPGTLYFYDRVTKRFDGIGQAYPTLTPERLAPMETLSVRTRDG
EECCCHHHHHHHHCCCCCCCEEEEHHHHHHHHCCCCCCCCCCCHHHHCCCHHEEEEECCC
ATITAYLTIPLAPGPRPLVVFPHGGPELRDHYDYQTFVQVLAAQGWLVLQPNFRGSGGYG
CEEEEEEEEEECCCCCEEEEECCCCCCHHHCCCHHHHHHHHHHCCEEEECCCCCCCCCCC
KAFADAGRKRWGDRMQEDLEDAVAHVLASGRADPKRVAIAGASYGGYAALQGAVRNPDLY
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCHHHHCCCCCCCHHH
KAVVSIAGDCDLVESIAFSRMQDGPDSPSYLYWLETIGDPAKDRDMLRAASPALHAEKVR
HHHHHHCCCHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCHHHHHHHCCCCHHHHHHC
APVLLIHGLEDVIVAPKQSRIMQSALKSAGKSVELIELKDVGHRDLREEHWNLVYSRTVQ
CCEEEEECCHHHEECCCHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHH
HIAKALA
HHHHHHC
>Mature Secondary Structure
MLSRRAIVASGVFAPALASFSIARAQASPHTIEELSAPPVDRDAALSPNGKFIALASTRR
CCCCCEEHCCCHHHHHHHHHHHHHCCCCCCHHHHCCCCCCCCCCCCCCCCCEEEEEECCC
IDENKDDSSITIIPADNPEKTLTVLPLGDRDIANVTWASDRRLLITLVIPLRRGGPSIGT
CCCCCCCCEEEEEECCCCCCEEEEEECCCCCCCEEEECCCCEEEEEEEEEECCCCCHHHC
RLASTSDPDERPKARRVLAIDMDGKNSVMLFGNDQMLREVPDLGDIVDLLPDDPDHILVK
CCCCCCCCCCCCCCCEEEEEEECCCCEEEEECCCHHHHHCCCHHHHHHHCCCCCCEEEEE
AANFSAGIYCLYKVNILTGEPELFERGTLKTRRWLTQAGVPVVRYDYNDRGTVQTIYVRA
EECCCCCEEEEEEEEEEECCHHHHHCCCCHHHHHHHHCCCEEEEEECCCCCCEEEEEEEC
PGEAAWRFFRKLRGDQQSKAEFEFIGAAPQPGVILALAPQGDDGALALREFDLRTLALGK
CCHHHHHHHHHHCCCCCCCCCEEEECCCCCCCEEEEECCCCCCCEEEEEECCCHHHHHHH
TLASKPNRDAEWVLRSRKGELMGVAFIEDRLTYQFTDPRMESVYRGLNRYLGDVCNIRIF
HHHCCCCCCHHHHHHCCCCCEEEEEEEECCCEEEECCHHHHHHHHHHHHHHCHHHEEEEE
DISDDGMRFLARVTGPREPGTLYFYDRVTKRFDGIGQAYPTLTPERLAPMETLSVRTRDG
EECCCHHHHHHHHCCCCCCCEEEEHHHHHHHHCCCCCCCCCCCHHHHCCCHHEEEEECCC
ATITAYLTIPLAPGPRPLVVFPHGGPELRDHYDYQTFVQVLAAQGWLVLQPNFRGSGGYG
CEEEEEEEEEECCCCCEEEEECCCCCCHHHCCCHHHHHHHHHHCCEEEECCCCCCCCCCC
KAFADAGRKRWGDRMQEDLEDAVAHVLASGRADPKRVAIAGASYGGYAALQGAVRNPDLY
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCHHHHCCCCCCCHHH
KAVVSIAGDCDLVESIAFSRMQDGPDSPSYLYWLETIGDPAKDRDMLRAASPALHAEKVR
HHHHHHCCCHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCHHHHHHHCCCCHHHHHHC
APVLLIHGLEDVIVAPKQSRIMQSALKSAGKSVELIELKDVGHRDLREEHWNLVYSRTVQ
CCEEEEECCHHHEECCCHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHH
HIAKALA
HHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9384377; 3098560 [H]