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The map label for this gene is yrbE [C]

Identifier: 16127925

GI number: 16127925

Start: 3947220

End: 3948029

Strand: Direct

Name: yrbE [C]

Synonym: CC_3695

Alternate gene names: 16127925

Gene position: 3947220-3948029 (Clockwise)

Preceding gene: 16127924

Following gene: 16127926

Centisome position: 98.26

GC content: 69.63

Gene sequence:

>810_bases
ATGACCGCGGCCGAGGCGGCCCGGCGGGTCGCCACCCATCCCATCCAGGCCCTGGGGCGCTCGACCCTGGCCACCGTGCG
CATGGTCGGCGCGGTCGGCGTCTTCGCCGTGCGCGGGGTCATCGCGGCCCTCACGCCGATCTGGTTCCTCAGCCAGCTGC
GCCGGCAGATCGTCGCGATCGGCTTCTTTTCGCTGCCGGTCGTGGGCCTTACCGCCGTATTCACCGGCGCGGCCCTGGCG
CTGAACATCTTCACCGGCGGGGGCCGGTTCAACGCCGAGCAGGTCATGCCCCAGATCGTCGCGCTGGGCATCACGCGCGA
ACTGGGCCCCGTGCTCGCAGCGCTGATGCTGGCCGGCCGGGTTTCGGCGGCCATCGCCGCCGAGATCGGGGCCATGCGCG
CGACCGAGCAGATCGACGCCATGCGCACCCTGTCGACCGACCCCTTCCGCTATCTGGTCGCGCCCCGCCTGCTGGCGGCG
GTGCTGACGCTGCCGCTGCTCACCGCCGTGGCCGACATCATCGGCATCGCCGGCGGCTGGCTGGTGGCCACGCGGGTGCT
GGAGTTCAATCCGACCGTCTATATCCGCAACACCATCGACTTCCTTGAGAGCTGGGACATCATCTCGGGCCTGATCAAGG
CGGCGGTGTTCGGCTTCATCGTGGCCCTGATGGGCTGCTATCACGGCTACAACGCCTCGGGCGGCGCGCGCGGCGTCGGC
CGGGCCACGACCCACGCGGTGGTCTCCTCGGCGATACTGATCTTCGCCACGGACTATCTCCTGACCACCCTTTTCACGCA
CATGTCATGA

Upstream 100 bases:

>100_bases
GGCCTGATCGGCTCGGTGATCCGGCCGCAAGGCGGCGCGGCGACGACCTCGACGCCCGCTGAGGCCAATCCGGCCACCCA
GCCGGCCGAGAGCTACTGAC

Downstream 100 bases:

>100_bases
CGAGCCAGGTTCCAAAACTCGCCTGGAAGGGCGTCACCAAGCAGTTCGGGGATCGCAAGGTCCTCGACCAGCTCGACCTG
TCCGTCGCCCCCGGCCGCTC

Product: ABC transporter permease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 269; Mature: 268

Protein sequence:

>269_residues
MTAAEAARRVATHPIQALGRSTLATVRMVGAVGVFAVRGVIAALTPIWFLSQLRRQIVAIGFFSLPVVGLTAVFTGAALA
LNIFTGGGRFNAEQVMPQIVALGITRELGPVLAALMLAGRVSAAIAAEIGAMRATEQIDAMRTLSTDPFRYLVAPRLLAA
VLTLPLLTAVADIIGIAGGWLVATRVLEFNPTVYIRNTIDFLESWDIISGLIKAAVFGFIVALMGCYHGYNASGGARGVG
RATTHAVVSSAILIFATDYLLTTLFTHMS

Sequences:

>Translated_269_residues
MTAAEAARRVATHPIQALGRSTLATVRMVGAVGVFAVRGVIAALTPIWFLSQLRRQIVAIGFFSLPVVGLTAVFTGAALA
LNIFTGGGRFNAEQVMPQIVALGITRELGPVLAALMLAGRVSAAIAAEIGAMRATEQIDAMRTLSTDPFRYLVAPRLLAA
VLTLPLLTAVADIIGIAGGWLVATRVLEFNPTVYIRNTIDFLESWDIISGLIKAAVFGFIVALMGCYHGYNASGGARGVG
RATTHAVVSSAILIFATDYLLTTLFTHMS
>Mature_268_residues
TAAEAARRVATHPIQALGRSTLATVRMVGAVGVFAVRGVIAALTPIWFLSQLRRQIVAIGFFSLPVVGLTAVFTGAALAL
NIFTGGGRFNAEQVMPQIVALGITRELGPVLAALMLAGRVSAAIAAEIGAMRATEQIDAMRTLSTDPFRYLVAPRLLAAV
LTLPLLTAVADIIGIAGGWLVATRVLEFNPTVYIRNTIDFLESWDIISGLIKAAVFGFIVALMGCYHGYNASGGARGVGR
ATTHAVVSSAILIFATDYLLTTLFTHMS

Specific function: Could be part of an ABC transporter complex [H]

COG id: COG0767

COG function: function code Q; ABC-type transport system involved in resistance to organic solvents, permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the mlaE permease family [H]

Homologues:

Organism=Escherichia coli, GI1789585, Length=255, Percent_Identity=34.1176470588235, Blast_Score=145, Evalue=3e-36,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003453 [H]

Pfam domain/function: PF02405 DUF140 [H]

EC number: NA

Molecular weight: Translated: 28314; Mature: 28183

Theoretical pI: Translated: 10.48; Mature: 10.48

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
TAAEAARRVATHPIQALGRSTLATVRMVGAVGVFAVRGVIAALTPIWFLSQLRRQIVAI
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GFFSLPVVGLTAVFTGAALALNIFTGGGRFNAEQVMPQIVALGITRELGPVLAALMLAGR
HHHHHHHHHHHHHHHHHHHHEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VSAAIAAEIGAMRATEQIDAMRTLSTDPFRYLVAPRLLAAVLTLPLLTAVADIIGIAGGW
HHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHH
LVATRVLEFNPTVYIRNTIDFLESWDIISGLIKAAVFGFIVALMGCYHGYNASGGARGVG
HHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
RATTHAVVSSAILIFATDYLLTTLFTHMS
HHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA