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The map label for this gene is yrbD [C]

Identifier: 16127924

GI number: 16127924

Start: 3946706

End: 3947218

Strand: Direct

Name: yrbD [C]

Synonym: CC_3694

Alternate gene names: 16127924

Gene position: 3946706-3947218 (Clockwise)

Preceding gene: 16127923

Following gene: 16127925

Centisome position: 98.25

GC content: 69.01

Gene sequence:

>513_bases
ATGGCATTGCGCGAACAATGGGCCGAAACGGCCATGGGCGTGGTCGTCCTCGCCCTGACGGCGGGGTTCCTGACCTATTC
GCTGACCGTGGGCGGCGTGCACATGAAGCGGGGCGACTACGAGATCAGCGCCAAGTTCGGCGAAGCCGGCTCGCTTGCCC
CGGGGGCTGCGGTCACGGTCGCGGGCGTCAAGGTCGGCACGGTCTCGCAGATTACGCTGGAGCCCAAGACCTATCTGGCC
GTGGCCAAGTTGAGCATCGACCCGACGGTCAAGCTGCCTGCGGACTCCACCGCCAAGATCACCAGCGACGGCCTGCTGGG
CGGCGCCCACGTGGCCATCGCGCCGGGCGCGTCACTGGACGACCTGAAGCCGGGCGGCGAGATCGAGAACACGCAAGGCG
CCGTCGATCTGTTCGGCCTGATCGGCTCGGTGATCCGGCCGCAAGGCGGCGCGGCGACGACCTCGACGCCCGCTGAGGCC
AATCCGGCCACCCAGCCGGCCGAGAGCTACTGA

Upstream 100 bases:

>100_bases
CGACAACGCCGGCGGCAACATCGACGTGCTGATCAACCAGCTTCAGAAGGGCGGCTCGGGTCGTCGCTAGGCGGGACCTG
GACTGGAAGGACAACGGCAT

Downstream 100 bases:

>100_bases
CATGACCGCGGCCGAGGCGGCCCGGCGGGTCGCCACCCATCCCATCCAGGCCCTGGGGCGCTCGACCCTGGCCACCGTGC
GCATGGTCGGCGCGGTCGGC

Product: ABC transporter substrate-binding protein

Products: NA

Alternate protein names: Luene Transport System Ttg2C Protein; Luene Tolerance Protein; Organic Solvent Resistance Transport System Ttg2C Protein; Mammalian Cell Entry Related Domain Protein; Cell Entry-Like Protein; Mammalian Cell Entry Domain-Containing Protein; ABC-Type Transport System Protein

Number of amino acids: Translated: 170; Mature: 169

Protein sequence:

>170_residues
MALREQWAETAMGVVVLALTAGFLTYSLTVGGVHMKRGDYEISAKFGEAGSLAPGAAVTVAGVKVGTVSQITLEPKTYLA
VAKLSIDPTVKLPADSTAKITSDGLLGGAHVAIAPGASLDDLKPGGEIENTQGAVDLFGLIGSVIRPQGGAATTSTPAEA
NPATQPAESY

Sequences:

>Translated_170_residues
MALREQWAETAMGVVVLALTAGFLTYSLTVGGVHMKRGDYEISAKFGEAGSLAPGAAVTVAGVKVGTVSQITLEPKTYLA
VAKLSIDPTVKLPADSTAKITSDGLLGGAHVAIAPGASLDDLKPGGEIENTQGAVDLFGLIGSVIRPQGGAATTSTPAEA
NPATQPAESY
>Mature_169_residues
ALREQWAETAMGVVVLALTAGFLTYSLTVGGVHMKRGDYEISAKFGEAGSLAPGAAVTVAGVKVGTVSQITLEPKTYLAV
AKLSIDPTVKLPADSTAKITSDGLLGGAHVAIAPGASLDDLKPGGEIENTQGAVDLFGLIGSVIRPQGGAATTSTPAEAN
PATQPAESY

Specific function: Unknown

COG id: COG1463

COG function: function code Q; ABC-type transport system involved in resistance to organic solvents, periplasmic component

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17093; Mature: 16961

Theoretical pI: Translated: 4.67; Mature: 4.67

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MALREQWAETAMGVVVLALTAGFLTYSLTVGGVHMKRGDYEISAKFGEAGSLAPGAAVTV
CCHHHHHHHHHHHHHHHHHHHHHHEEEEEECCEEEECCCEEEEEECCCCCCCCCCCEEEE
AGVKVGTVSQITLEPKTYLAVAKLSIDPTVKLPADSTAKITSDGLLGGAHVAIAPGASLD
ECEEECCEEEEEECCCEEEEEEEEECCCCEECCCCCCCEEECCCCCCCCEEEEECCCCCC
DLKPGGEIENTQGAVDLFGLIGSVIRPQGGAATTSTPAEANPATQPAESY
CCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
ALREQWAETAMGVVVLALTAGFLTYSLTVGGVHMKRGDYEISAKFGEAGSLAPGAAVTV
CHHHHHHHHHHHHHHHHHHHHHHEEEEEECCEEEECCCEEEEEECCCCCCCCCCCEEEE
AGVKVGTVSQITLEPKTYLAVAKLSIDPTVKLPADSTAKITSDGLLGGAHVAIAPGASLD
ECEEECCEEEEEECCCEEEEEEEEECCCCEECCCCCCCEEECCCCCCCCEEEEECCCCCC
DLKPGGEIENTQGAVDLFGLIGSVIRPQGGAATTSTPAEANPATQPAESY
CCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA