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The map label for this gene is yadS [H]

Identifier: 16127910

GI number: 16127910

Start: 3931902

End: 3932591

Strand: Direct

Name: yadS [H]

Synonym: CC_3680

Alternate gene names: 16127910

Gene position: 3931902-3932591 (Clockwise)

Preceding gene: 16127906

Following gene: 16127911

Centisome position: 97.88

GC content: 68.7

Gene sequence:

>690_bases
ATGGTTAGCGCCGCACGCGGACGCGTGCGATGGAGGGGCATGGACTTGCAGCTTGACCCGCTCGGAACCGCGCTTTTCTG
GCTCGACTACGCCGCTGCGGCGGTGTTCGGGGCAACCGGCGCCCTCGCGGCCGCCCGGCGCAAGCATGACATCATCACCT
TCGGATTTTTCGCCGCCATCACCGGCGTGGGCGGGGGCACGCTGCGCGACCTGCTGATCGGAGCCCCTGTGTTCTGGGTG
CAGCGGCCGGGCTACATCCTGGCCTGTCTGGCCGCCGCCACCGTCGTCTGGCTGATGGGCAAGCGCGGCTGGCGGTTCCG
GGCGCTGCTCTGGCTCGACGCGCTCGGCATGGCCGCCTACGCCGTGGTGGGCACGGCCAAGGCGCTTGGGCTTGGCGTTC
ATCCCATCAGCGCTGTGGTGATGGGCGTGCTGACCACCGCCTTTGGCGGCGTCATTCGTGACGTGCTGGCCGAGGAACCG
AACCTTCTGTTGCGTCGGGAAATCTACATCACCGCCGCGCTTCTGGGCGCGGGCGTGTTCGCGGTGCTGAAGCTTATGGG
CGTCGCCTTCTGGCCCGCGGGCATCGCCGGCTTTATCGCCGCGTTTGGCCTTCGCGCTTGCGCGATCCTGTTCGGCTGGA
GCCTTCCCGGGTTCGCCGAGGGCGAGGTTTCGGGCGATGTGCGGCAGTAG

Upstream 100 bases:

>100_bases
CGTCAGGCGCTGGAACCAGCCTTTTTTCTGCTCGGGCTTATCGCTCATCCGCGCCCCTTTAGTCGAACGGGCGAAAGTGT
AAATCGGGATTTAACGGTCA

Downstream 100 bases:

>100_bases
GTCGCAAAACGCCAGCCTGTCGCCCAGGGTTTACCCCTTGCGCTGGCCGCAGCTTCACCCAATATCTGTTGTGCGGGCCG
GGCCCCTCTGACGACCCTCG

Product: YghA protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 229; Mature: 229

Protein sequence:

>229_residues
MVSAARGRVRWRGMDLQLDPLGTALFWLDYAAAAVFGATGALAAARRKHDIITFGFFAAITGVGGGTLRDLLIGAPVFWV
QRPGYILACLAAATVVWLMGKRGWRFRALLWLDALGMAAYAVVGTAKALGLGVHPISAVVMGVLTTAFGGVIRDVLAEEP
NLLLRREIYITAALLGAGVFAVLKLMGVAFWPAGIAGFIAAFGLRACAILFGWSLPGFAEGEVSGDVRQ

Sequences:

>Translated_229_residues
MVSAARGRVRWRGMDLQLDPLGTALFWLDYAAAAVFGATGALAAARRKHDIITFGFFAAITGVGGGTLRDLLIGAPVFWV
QRPGYILACLAAATVVWLMGKRGWRFRALLWLDALGMAAYAVVGTAKALGLGVHPISAVVMGVLTTAFGGVIRDVLAEEP
NLLLRREIYITAALLGAGVFAVLKLMGVAFWPAGIAGFIAAFGLRACAILFGWSLPGFAEGEVSGDVRQ
>Mature_229_residues
MVSAARGRVRWRGMDLQLDPLGTALFWLDYAAAAVFGATGALAAARRKHDIITFGFFAAITGVGGGTLRDLLIGAPVFWV
QRPGYILACLAAATVVWLMGKRGWRFRALLWLDALGMAAYAVVGTAKALGLGVHPISAVVMGVLTTAFGGVIRDVLAEEP
NLLLRREIYITAALLGAGVFAVLKLMGVAFWPAGIAGFIAAFGLRACAILFGWSLPGFAEGEVSGDVRQ

Specific function: Unknown

COG id: COG2860

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0126 family [H]

Homologues:

Organism=Escherichia coli, GI1786352, Length=202, Percent_Identity=35.6435643564356, Blast_Score=95, Evalue=4e-21,
Organism=Escherichia coli, GI87082304, Length=135, Percent_Identity=40, Blast_Score=89, Evalue=2e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005115 [H]

Pfam domain/function: PF03458 UPF0126 [H]

EC number: NA

Molecular weight: Translated: 24122; Mature: 24122

Theoretical pI: Translated: 10.43; Mature: 10.43

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVSAARGRVRWRGMDLQLDPLGTALFWLDYAAAAVFGATGALAAARRKHDIITFGFFAAI
CCCCCCCCEEEECCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH
TGVGGGTLRDLLIGAPVFWVQRPGYILACLAAATVVWLMGKRGWRFRALLWLDALGMAAY
HCCCCHHHHHHHHCCCEEEEECCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH
AVVGTAKALGLGVHPISAVVMGVLTTAFGGVIRDVLAEEPNLLLRREIYITAALLGAGVF
HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH
AVLKLMGVAFWPAGIAGFIAAFGLRACAILFGWSLPGFAEGEVSGDVRQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MVSAARGRVRWRGMDLQLDPLGTALFWLDYAAAAVFGATGALAAARRKHDIITFGFFAAI
CCCCCCCCEEEECCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH
TGVGGGTLRDLLIGAPVFWVQRPGYILACLAAATVVWLMGKRGWRFRALLWLDALGMAAY
HCCCCHHHHHHHHCCCEEEEECCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH
AVVGTAKALGLGVHPISAVVMGVLTTAFGGVIRDVLAEEPNLLLRREIYITAALLGAGVF
HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH
AVLKLMGVAFWPAGIAGFIAAFGLRACAILFGWSLPGFAEGEVSGDVRQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA