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The map label for this gene is yggU [C]

Identifier: 16127852

GI number: 16127852

Start: 3880956

End: 3881252

Strand: Direct

Name: yggU [C]

Synonym: CC_3622

Alternate gene names: 16127852

Gene position: 3880956-3881252 (Clockwise)

Preceding gene: 16127851

Following gene: 16127853

Centisome position: 96.61

GC content: 70.03

Gene sequence:

>297_bases
TTGGCTGACGGCGTGGCGGTGACGCTCGTGGTGCGCCTGACCCCGAGGGGCGGGCGAGACGCCGCCGAGGGTTGGGCGCT
TGACGCCGACGGCCGCCTCTATCTGAAGGTGAGGGTCGCCAGTCCGCCCGTCGAGGGCGCGGCGAATGCGGCCCTCATCG
CCTTTCTGGCAAAGACCCTGAAGATTCCTCGCTCGGCCGTACGACTGGCGGCTGGCGAAACCGCGCGGCTAAAGCGTCTC
GAACTGGAGGGCGTGGACCCAGCCGATGTCGCACGCGCGTTCGGGCCGCCGAACTAG

Upstream 100 bases:

>100_bases
CTCGGCGGCGTCGACATCAGCCCGATCGTTGTTCTGCTGATCATTTCGGGCGTGCAGAACTATCTGCTGCCTGCGCTTCA
AGGCACGCTGATCGCTCTTC

Downstream 100 bases:

>100_bases
CGCGGGTCGGCATTATTGGGATTTTATGCCCCAAAACCTGCCCCAATGGCAGTAACGCGCAAAAATCTTCCGGTGCGCGC
CGGACACCCAAGCCGTTGAC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 98; Mature: 97

Protein sequence:

>98_residues
MADGVAVTLVVRLTPRGGRDAAEGWALDADGRLYLKVRVASPPVEGAANAALIAFLAKTLKIPRSAVRLAAGETARLKRL
ELEGVDPADVARAFGPPN

Sequences:

>Translated_98_residues
MADGVAVTLVVRLTPRGGRDAAEGWALDADGRLYLKVRVASPPVEGAANAALIAFLAKTLKIPRSAVRLAAGETARLKRL
ELEGVDPADVARAFGPPN
>Mature_97_residues
ADGVAVTLVVRLTPRGGRDAAEGWALDADGRLYLKVRVASPPVEGAANAALIAFLAKTLKIPRSAVRLAAGETARLKRLE
LEGVDPADVARAFGPPN

Specific function: Unknown

COG id: COG1872

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0235 family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y3622_CAUCR (Q9A2E3)

Other databases:

- EMBL:   AE005673
- PIR:   D87698
- RefSeq:   NP_422416.1
- ProteinModelPortal:   Q9A2E3
- SMR:   Q9A2E3
- GeneID:   940695
- GenomeReviews:   AE005673_GR
- KEGG:   ccr:CC_3622
- NMPDR:   fig|190650.1.peg.3596
- TIGR:   CC_3622
- HOGENOM:   HBG472132
- OMA:   ARKKILR
- ProtClustDB:   CLSK891601
- HAMAP:   MF_00634
- InterPro:   IPR003746
- Gene3D:   G3DSA:3.30.1200.10

Pfam domain/function: PF02594 DUF167; SSF69786 DUF167

EC number: NA

Molecular weight: Translated: 10201; Mature: 10070

Theoretical pI: Translated: 10.45; Mature: 10.45

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
0.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MADGVAVTLVVRLTPRGGRDAAEGWALDADGRLYLKVRVASPPVEGAANAALIAFLAKTL
CCCCEEEEEEEEECCCCCCCCCCCEEECCCCEEEEEEEECCCCCCCCCHHHHHHHHHHHH
KIPRSAVRLAAGETARLKRLELEGVDPADVARAFGPPN
HCCHHHHHHHCCCCCEEEEEEECCCCHHHHHHHCCCCC
>Mature Secondary Structure 
ADGVAVTLVVRLTPRGGRDAAEGWALDADGRLYLKVRVASPPVEGAANAALIAFLAKTL
CCCEEEEEEEEECCCCCCCCCCCEEECCCCEEEEEEEECCCCCCCCCHHHHHHHHHHHH
KIPRSAVRLAAGETARLKRLELEGVDPADVARAFGPPN
HCCHHHHHHHCCCCCEEEEEEECCCCHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11259647