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The map label for this gene is acoR [H]

Identifier: 16127809

GI number: 16127809

Start: 3834058

End: 3835002

Strand: Direct

Name: acoR [H]

Synonym: CC_3579

Alternate gene names: 16127809

Gene position: 3834058-3835002 (Clockwise)

Preceding gene: 16127807

Following gene: 16127810

Centisome position: 95.45

GC content: 72.38

Gene sequence:

>945_bases
ATGGCCGAACCAGGCCATGCCGAGAGGGTTCTGTCGGTGCTGCGCGACGGCGCGGCCACGCCGCTGGCCGCCTCATGGCG
TCGCAGCCTGACCCTGCATCAGCTGGACCCCGAAAACCGCAAGCCGCCTGAAACCCTGTCCGGCGCCGAGCTGAAGGCGG
CGCAGGAGCAGATGGGGCCCCTGCTGGCCGCCGCCCAAGACAATCTCGACGCCCTGTTCCAGGCCGTCGGCGACGGCGGC
TGCTGCGTGTTGCTGACCAACGCCGACGGCGTGCCGGTCGACCGGCGGGGCGTCTCGGCGGACGATCCGGTGTTCCGGCG
CTGGGGCCTCTGGAACGGCGCGGTGTGGAGCGAGGCCCGCGAGGGGACCAACGGCATCGGCACCTGCCTCGCCGAGCAAC
GCGTGCTGACCATCCATCGCGACCAGCACTTCCACACGCGCAACATTGGCCTGTCCTGCACCGTGGCGCCACTGTTCGAC
CCCTGCGGCCGCATCGCCGGCGCGCTGGATGTGTCCTCGTGTCGCCCCGGTCTGGACAGCCTGACGGGGCTGGTCGAACG
CGCGGTCACTGACGCCGCGCGGCGTATTGAGGCGCGCGCCTTCCGCGAGGCCTACCCCGGCGCGCGCATTGTGCTGTTGC
CCGACACCGCCGCCGACCGCGCGTCGGTCCCGATGCTGGCGGTCGACGCCGACGACGTGGTGATCGGCGCCACCCGCGCC
GCCCGCCTCGCCCTGAAGCTGACCGACGAGACCCTGAAACGCGGCCTGCCCTCGCCGGATCGTTCGGCCGATCTCGACGA
GGCCGAACGCGCCGCCGTCCGCCGCGCCCTCACCCAGGCCGGCGGCAATGTCTCGGCCGCCGCCGGCTTGCTTGGCCTGT
CTCGCGCCACCCTGAACCGCAAGCTCAAGCGGCTGGATCTGGCGCGCGGACGCGAATTCCACTGA

Upstream 100 bases:

>100_bases
CCCGAATTGAGCCGTCCGTAGAACGCCGGACTTGCGCGGCCCCTTCCCGCTACGTCATGCTGACGTCCAAGTCGGGAAAG
CCTGACGCGGAGGAAACGCG

Downstream 100 bases:

>100_bases
ACCTGTCTCAGTTCTGAGACACACGGCGCCGGCTCGATCGTCGAGGTGGCGCCACGCCGCGCTGTTCACGCCAAGCTCGC
CTCCAAGACGCCTCGACGGC

Product: transcriptional regulator, internal deletion

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 314; Mature: 313

Protein sequence:

>314_residues
MAEPGHAERVLSVLRDGAATPLAASWRRSLTLHQLDPENRKPPETLSGAELKAAQEQMGPLLAAAQDNLDALFQAVGDGG
CCVLLTNADGVPVDRRGVSADDPVFRRWGLWNGAVWSEAREGTNGIGTCLAEQRVLTIHRDQHFHTRNIGLSCTVAPLFD
PCGRIAGALDVSSCRPGLDSLTGLVERAVTDAARRIEARAFREAYPGARIVLLPDTAADRASVPMLAVDADDVVIGATRA
ARLALKLTDETLKRGLPSPDRSADLDEAERAAVRRALTQAGGNVSAAAGLLGLSRATLNRKLKRLDLARGREFH

Sequences:

>Translated_314_residues
MAEPGHAERVLSVLRDGAATPLAASWRRSLTLHQLDPENRKPPETLSGAELKAAQEQMGPLLAAAQDNLDALFQAVGDGG
CCVLLTNADGVPVDRRGVSADDPVFRRWGLWNGAVWSEAREGTNGIGTCLAEQRVLTIHRDQHFHTRNIGLSCTVAPLFD
PCGRIAGALDVSSCRPGLDSLTGLVERAVTDAARRIEARAFREAYPGARIVLLPDTAADRASVPMLAVDADDVVIGATRA
ARLALKLTDETLKRGLPSPDRSADLDEAERAAVRRALTQAGGNVSAAAGLLGLSRATLNRKLKRLDLARGREFH
>Mature_313_residues
AEPGHAERVLSVLRDGAATPLAASWRRSLTLHQLDPENRKPPETLSGAELKAAQEQMGPLLAAAQDNLDALFQAVGDGGC
CVLLTNADGVPVDRRGVSADDPVFRRWGLWNGAVWSEAREGTNGIGTCLAEQRVLTIHRDQHFHTRNIGLSCTVAPLFDP
CGRIAGALDVSSCRPGLDSLTGLVERAVTDAARRIEARAFREAYPGARIVLLPDTAADRASVPMLAVDADDVVIGATRAA
RLALKLTDETLKRGLPSPDRSADLDEAERAAVRRALTQAGGNVSAAAGLLGLSRATLNRKLKRLDLARGREFH

Specific function: Required for sigma-54-dependent transcription of acoXABC [H]

COG id: COG3284

COG function: function code QK; Transcriptional activator of acetoin/glycerol metabolism

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 sigma-54 factor interaction domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003593
- InterPro:   IPR020441
- InterPro:   IPR009057
- InterPro:   IPR002197
- InterPro:   IPR002078 [H]

Pfam domain/function: PF02954 HTH_8; PF00158 Sigma54_activat [H]

EC number: NA

Molecular weight: Translated: 33492; Mature: 33361

Theoretical pI: Translated: 7.47; Mature: 7.47

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAEPGHAERVLSVLRDGAATPLAASWRRSLTLHQLDPENRKPPETLSGAELKAAQEQMGP
CCCCCHHHHHHHHHHCCCCCCHHHHHHHCCEEEECCCCCCCCCCCCCCCHHHHHHHHHCH
LLAAAQDNLDALFQAVGDGGCCVLLTNADGVPVDRRGVSADDPVFRRWGLWNGAVWSEAR
HHHHHHCCHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCHHHHHCCCCCHHHHHHH
EGTNGIGTCLAEQRVLTIHRDQHFHTRNIGLSCTVAPLFDPCGRIAGALDVSSCRPGLDS
CCCCHHHHHHHHCCEEEEECCCCEEECCCCCEEEEHHHHHHHHHHHCCCCHHHCCCCHHH
LTGLVERAVTDAARRIEARAFREAYPGARIVLLPDTAADRASVPMLAVDADDVVIGATRA
HHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCEEEECCCCEEEECHHH
ARLALKLTDETLKRGLPSPDRSADLDEAERAAVRRALTQAGGNVSAAAGLLGLSRATLNR
HHEEEEECHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH
KLKRLDLARGREFH
HHHHHHHHCCCCCC
>Mature Secondary Structure 
AEPGHAERVLSVLRDGAATPLAASWRRSLTLHQLDPENRKPPETLSGAELKAAQEQMGP
CCCCHHHHHHHHHHCCCCCCHHHHHHHCCEEEECCCCCCCCCCCCCCCHHHHHHHHHCH
LLAAAQDNLDALFQAVGDGGCCVLLTNADGVPVDRRGVSADDPVFRRWGLWNGAVWSEAR
HHHHHHCCHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCHHHHHCCCCCHHHHHHH
EGTNGIGTCLAEQRVLTIHRDQHFHTRNIGLSCTVAPLFDPCGRIAGALDVSSCRPGLDS
CCCCHHHHHHHHCCEEEEECCCCEEECCCCCEEEEHHHHHHHHHHHCCCCHHHCCCCHHH
LTGLVERAVTDAARRIEARAFREAYPGARIVLLPDTAADRASVPMLAVDADDVVIGATRA
HHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCEEEECCCCEEEECHHH
ARLALKLTDETLKRGLPSPDRSADLDEAERAAVRRALTQAGGNVSAAAGLLGLSRATLNR
HHEEEEECHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH
KLKRLDLARGREFH
HHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1378052 [H]