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The map label for this gene is ygiF [H]

Identifier: 16127752

GI number: 16127752

Start: 3764763

End: 3766292

Strand: Direct

Name: ygiF [H]

Synonym: CC_3522

Alternate gene names: 16127752

Gene position: 3764763-3766292 (Clockwise)

Preceding gene: 16127749

Following gene: 16127763

Centisome position: 93.72

GC content: 73.14

Gene sequence:

>1530_bases
TTGGCAAGAGTTCCGCTAGAGCAGTTGCTGACGCGCTGGGGAGACGCTCTGTTCATGGATCATGAGATCGAGCTGAAGTT
CCTGATCCCGCCCGAGGCGGCCGAGGCGATCCTTGACGTCCTGGACGGCGAGGGCGCGGTGCGCCAGCTCGACGCCACCT
ATTACGACACCGCCGATCACGCGCTGCGCCGGGCCGGCTTTGGCCTGCGGGTGCGCGACGGCGAGGGCGGGCGCAAGCAG
ACCCTGAAGTCGGCCTCGGCGGGCGGGGTGTTCTCGCGCGGCGAATGGGAAGAGACGATCGCGGGGCCGACGCCCGATCG
CGACGCCCTGGCCCGCACGCCGGTGGGCGAGATGCTGGCCGAGGCGGCGCTGGCGCCGGTGTTCACCGCCCGGGTCGAGC
GGACTATCCGCATGGTCGCGGCCGGCGAGACGCTGATCGAGGTCGCCCTGGATCGCGGCGAGCTCAGCGCCGGCGAGCGT
CAGGCCACTGTCTGCGAGCTCGAGCTGGAACTGAAGACGGGCGAGCCGCAGGCGCTGTTCGATCTGGCCCGCACCCTGGC
CCGGCACGCGCCGCTGCGGCTGTCGCTGATCAGCAAGGCCGAGCGCGGCTATGGCCTGGCGGCCGGCGACGCGGCGCCGC
GCGTTCGCCGCCAGACGGCGGCCCTGGGTCCGGAGGCGAGCGTCGAGGCGGCGTTGCAGGCGATCGGCCAGGCGGGCCTG
GCTCACCTGTGCGCGGCGCTGGAGGCCCTGCGCGAGCGGCCCGCGCCGGACAGCGTCCACCAGGCGCGCGTCGCCGCCCG
TCGCCTCCGGGCGATGCTGAAGATCTTCAAGCCGCTATCGCGCGACGCCGCCGCCCTGGCGCTGGACGCCGAGCTCGACT
GGCTGGCCGGCGAGCTGGACGCCGCCCGCGATCTCGACGTCTTCGTCGGCGAGGTCTGGGAAGGCTCGGCGGCGACCTTC
GAGGGCCGCGAGGCCTTCGAGCGCGGCCTGAAGGCCGCCCGGGCCACCGCCTATCTGCGCATGGAGGCCGCCCTCGAAAG
CCCGCGCGCGCGCGATGTCCTCCTCGAAGCCGCCGCCTGGCTCGAAGCCGGCGCCTGGACCAGCGATCCCGCCCTCGCCG
AGCTCCGCACGATCGCCGCGGCCGCCTATGCTGCCGACAGACTTGATCGTCTGCGCCGCCGGATGAAGAAGGGCGCCAAG
CATTTTGACGCCCTCGACGCTCACGCGCGCCACCGGCTGCGCCTGAAGGGCAAGACCCTCCGCTACGCCGCCGAGGACCT
GGCGCCGCTCTTCCCGAACCACCCGCGCCGCGCCGAACGCTTCCTCGCCGCAGCCAAGGCGGTGCAGGACACCCTGGGCG
TGCTCAACGACCGCGCCATCCGCAGGGATCTGGTGAACAGCTGCGTCCATGGCGACGCGACCCTGGCGCGCGCGGCTACG
GAGGCGCTGCTCCCGTGCGACGGCGACAAGCTTCTACGCGCCGCCCGCGGGGCGCTGGACGACCTGCTGGACGCCAAATC
GTTCTGGTGA

Upstream 100 bases:

>100_bases
GCAGGGCGAACAGGGCCTCGACCTCGGCAAGCGTCCAGTCGTGGCGGGGGGAAGCGGTGATCTCACTCATGGCCGCGACG
TTTGGACCGACACATGACGA

Downstream 100 bases:

>100_bases
TCGGATCCGGAAACGAAAAAAGCCGCCCGAAGGCGGCTTCTTGTCGATCAGTCCACTGGGTGCGGGGACAGGATTTGAAC
CTGTGACCTTCAGGTTATGA

Product: hypothetical protein

Products: NA

Alternate protein names: ORFXE [H]

Number of amino acids: Translated: 509; Mature: 508

Protein sequence:

>509_residues
MARVPLEQLLTRWGDALFMDHEIELKFLIPPEAAEAILDVLDGEGAVRQLDATYYDTADHALRRAGFGLRVRDGEGGRKQ
TLKSASAGGVFSRGEWEETIAGPTPDRDALARTPVGEMLAEAALAPVFTARVERTIRMVAAGETLIEVALDRGELSAGER
QATVCELELELKTGEPQALFDLARTLARHAPLRLSLISKAERGYGLAAGDAAPRVRRQTAALGPEASVEAALQAIGQAGL
AHLCAALEALRERPAPDSVHQARVAARRLRAMLKIFKPLSRDAAALALDAELDWLAGELDAARDLDVFVGEVWEGSAATF
EGREAFERGLKAARATAYLRMEAALESPRARDVLLEAAAWLEAGAWTSDPALAELRTIAAAAYAADRLDRLRRRMKKGAK
HFDALDAHARHRLRLKGKTLRYAAEDLAPLFPNHPRRAERFLAAAKAVQDTLGVLNDRAIRRDLVNSCVHGDATLARAAT
EALLPCDGDKLLRAARGALDDLLDAKSFW

Sequences:

>Translated_509_residues
MARVPLEQLLTRWGDALFMDHEIELKFLIPPEAAEAILDVLDGEGAVRQLDATYYDTADHALRRAGFGLRVRDGEGGRKQ
TLKSASAGGVFSRGEWEETIAGPTPDRDALARTPVGEMLAEAALAPVFTARVERTIRMVAAGETLIEVALDRGELSAGER
QATVCELELELKTGEPQALFDLARTLARHAPLRLSLISKAERGYGLAAGDAAPRVRRQTAALGPEASVEAALQAIGQAGL
AHLCAALEALRERPAPDSVHQARVAARRLRAMLKIFKPLSRDAAALALDAELDWLAGELDAARDLDVFVGEVWEGSAATF
EGREAFERGLKAARATAYLRMEAALESPRARDVLLEAAAWLEAGAWTSDPALAELRTIAAAAYAADRLDRLRRRMKKGAK
HFDALDAHARHRLRLKGKTLRYAAEDLAPLFPNHPRRAERFLAAAKAVQDTLGVLNDRAIRRDLVNSCVHGDATLARAAT
EALLPCDGDKLLRAARGALDDLLDAKSFW
>Mature_508_residues
ARVPLEQLLTRWGDALFMDHEIELKFLIPPEAAEAILDVLDGEGAVRQLDATYYDTADHALRRAGFGLRVRDGEGGRKQT
LKSASAGGVFSRGEWEETIAGPTPDRDALARTPVGEMLAEAALAPVFTARVERTIRMVAAGETLIEVALDRGELSAGERQ
ATVCELELELKTGEPQALFDLARTLARHAPLRLSLISKAERGYGLAAGDAAPRVRRQTAALGPEASVEAALQAIGQAGLA
HLCAALEALRERPAPDSVHQARVAARRLRAMLKIFKPLSRDAAALALDAELDWLAGELDAARDLDVFVGEVWEGSAATFE
GREAFERGLKAARATAYLRMEAALESPRARDVLLEAAAWLEAGAWTSDPALAELRTIAAAAYAADRLDRLRRRMKKGAKH
FDALDAHARHRLRLKGKTLRYAAEDLAPLFPNHPRRAERFLAAAKAVQDTLGVLNDRAIRRDLVNSCVHGDATLARAATE
ALLPCDGDKLLRAARGALDDLLDAKSFW

Specific function: Unknown

COG id: COG3025

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To H.influenzae HI_1598 [H]

Homologues:

Organism=Escherichia coli, GI1789434, Length=212, Percent_Identity=40.0943396226415, Blast_Score=121, Evalue=9e-29,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008172
- InterPro:   IPR004206 [H]

Pfam domain/function: PF01928 CYTH [H]

EC number: NA

Molecular weight: Translated: 55184; Mature: 55053

Theoretical pI: Translated: 6.53; Mature: 6.53

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MARVPLEQLLTRWGDALFMDHEIELKFLIPPEAAEAILDVLDGEGAVRQLDATYYDTADH
CCCCCHHHHHHHCCCEEEECCCEEEEEECCCHHHHHHHHHHCCCCHHHHHCCHHHHHHHH
ALRRAGFGLRVRDGEGGRKQTLKSASAGGVFSRGEWEETIAGPTPDRDALARTPVGEMLA
HHHHCCCCEEEECCCCCHHHHHHHCCCCCCCCCCCCHHHCCCCCCCHHHHHCCCHHHHHH
EAALAPVFTARVERTIRMVAAGETLIEVALDRGELSAGERQATVCELELELKTGEPQALF
HHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCCCCCCEEEEEEEEEECCCCHHHH
DLARTLARHAPLRLSLISKAERGYGLAAGDAAPRVRRQTAALGPEASVEAALQAIGQAGL
HHHHHHHHCCCCHHHHHHHHHCCCCEECCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHH
AHLCAALEALRERPAPDSVHQARVAARRLRAMLKIFKPLSRDAAALALDAELDWLAGELD
HHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHEEECCCHHHHHHHHC
AARDLDVFVGEVWEGSAATFEGREAFERGLKAARATAYLRMEAALESPRARDVLLEAAAW
CCCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH
LEAGAWTSDPALAELRTIAAAAYAADRLDRLRRRMKKGAKHFDALDAHARHRLRLKGKTL
HHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHH
RYAAEDLAPLFPNHPRRAERFLAAAKAVQDTLGVLNDRAIRRDLVNSCVHGDATLARAAT
HHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH
EALLPCDGDKLLRAARGALDDLLDAKSFW
HHHCCCCHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
ARVPLEQLLTRWGDALFMDHEIELKFLIPPEAAEAILDVLDGEGAVRQLDATYYDTADH
CCCCHHHHHHHCCCEEEECCCEEEEEECCCHHHHHHHHHHCCCCHHHHHCCHHHHHHHH
ALRRAGFGLRVRDGEGGRKQTLKSASAGGVFSRGEWEETIAGPTPDRDALARTPVGEMLA
HHHHCCCCEEEECCCCCHHHHHHHCCCCCCCCCCCCHHHCCCCCCCHHHHHCCCHHHHHH
EAALAPVFTARVERTIRMVAAGETLIEVALDRGELSAGERQATVCELELELKTGEPQALF
HHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCCCCCCEEEEEEEEEECCCCHHHH
DLARTLARHAPLRLSLISKAERGYGLAAGDAAPRVRRQTAALGPEASVEAALQAIGQAGL
HHHHHHHHCCCCHHHHHHHHHCCCCEECCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHH
AHLCAALEALRERPAPDSVHQARVAARRLRAMLKIFKPLSRDAAALALDAELDWLAGELD
HHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHEEECCCHHHHHHHHC
AARDLDVFVGEVWEGSAATFEGREAFERGLKAARATAYLRMEAALESPRARDVLLEAAAW
CCCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH
LEAGAWTSDPALAELRTIAAAAYAADRLDRLRRRMKKGAKHFDALDAHARHRLRLKGKTL
HHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHH
RYAAEDLAPLFPNHPRRAERFLAAAKAVQDTLGVLNDRAIRRDLVNSCVHGDATLARAAT
HHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH
EALLPCDGDKLLRAARGALDDLLDAKSFW
HHHCCCCHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8412694; 9278503 [H]