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The map label for this gene is yqfA [H]

Identifier: 16127717

GI number: 16127717

Start: 3729018

End: 3729716

Strand: Direct

Name: yqfA [H]

Synonym: CC_3487

Alternate gene names: 16127717

Gene position: 3729018-3729716 (Clockwise)

Preceding gene: 16127716

Following gene: 16127718

Centisome position: 92.83

GC content: 67.67

Gene sequence:

>699_bases
ATGACCGAACTCACCATCACCAGCCAAGCGACCGACTTGGCCATCGCCAAGCCGGGCCGGCACTATCCAACGCCGGCGGC
CAAGTGCGCCGACCTCGTCGTCCACCTGGCGGGCCTAGCCTTCGCCCTGATGGGTGGCGGCATCCTGCTGGGCCTGGCGT
TCGGCCTGGGCAATCTGGGCCAGGTCGCGGCGGTCAGCATCTACACCGTGGGTCTGATCCTGATGCTGTCGCTGTCGACG
GCCTACAACTTCGCCAAGGCCCGCTGGCGTCCGCTGCTGCGCCGCTTTGACCACGCCGGCATCTTCGTGATGATCGCCGC
GTCGTACACGCCCTTCACCACCCAGAACCTGCACGGCTGGTGGTCCATCGGCATGACCACGGCGGTCTGGACCGTGGCCG
GCGTCGGCGTGCTGGCAAAGCTGTTGCTGCCGGGCCTGGACAAGCGCTTCTGGGTGGGCCTGTACCTCGCCCTAGGCTGG
CTGGTGCTGGTGGCCATCAAGCCGATGATCGAGGGCCTGTCCTGGCCGGCCCTGCTGCTGCTGGCGATCGGCGGGATCGT
CTATTCGACCGGCACAATCTTCTACCTGATGCGCCGCCTGAAGTTCCGCCGCGCCATCTGGCACGGCCACGTCATCGGCG
GCGCGGGCCTGCACTATGCCGCCGTTCTGGTGGGCGTGGTCCTGACCGGCGCGCACTAA

Upstream 100 bases:

>100_bases
TCGTGTCGCCTCGGCCCTTTCGCGGCCATGATGATCGACGCTTATATGTCGCGGAACGAACCTATGCTTCGCGCATACTG
CAAGCCACCAGAGCCGGGCC

Downstream 100 bases:

>100_bases
CCTTCGGAGGCCTGGCGTGGAGAAGGACCCGGCCGGCAGTTTCAGCCTGCAAGGCTTCTTCCGGGACTGGAAGTCCAACG
ACCCGCTGCGCGGCAAGCGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 232; Mature: 231

Protein sequence:

>232_residues
MTELTITSQATDLAIAKPGRHYPTPAAKCADLVVHLAGLAFALMGGGILLGLAFGLGNLGQVAAVSIYTVGLILMLSLST
AYNFAKARWRPLLRRFDHAGIFVMIAASYTPFTTQNLHGWWSIGMTTAVWTVAGVGVLAKLLLPGLDKRFWVGLYLALGW
LVLVAIKPMIEGLSWPALLLLAIGGIVYSTGTIFYLMRRLKFRRAIWHGHVIGGAGLHYAAVLVGVVLTGAH

Sequences:

>Translated_232_residues
MTELTITSQATDLAIAKPGRHYPTPAAKCADLVVHLAGLAFALMGGGILLGLAFGLGNLGQVAAVSIYTVGLILMLSLST
AYNFAKARWRPLLRRFDHAGIFVMIAASYTPFTTQNLHGWWSIGMTTAVWTVAGVGVLAKLLLPGLDKRFWVGLYLALGW
LVLVAIKPMIEGLSWPALLLLAIGGIVYSTGTIFYLMRRLKFRRAIWHGHVIGGAGLHYAAVLVGVVLTGAH
>Mature_231_residues
TELTITSQATDLAIAKPGRHYPTPAAKCADLVVHLAGLAFALMGGGILLGLAFGLGNLGQVAAVSIYTVGLILMLSLSTA
YNFAKARWRPLLRRFDHAGIFVMIAASYTPFTTQNLHGWWSIGMTTAVWTVAGVGVLAKLLLPGLDKRFWVGLYLALGWL
VLVAIKPMIEGLSWPALLLLAIGGIVYSTGTIFYLMRRLKFRRAIWHGHVIGGAGLHYAAVLVGVVLTGAH

Specific function: Unknown

COG id: COG1272

COG function: function code R; Predicted membrane protein, hemolysin III homolog

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0073 (Hly-III) family [H]

Homologues:

Organism=Homo sapiens, GI154759275, Length=212, Percent_Identity=28.7735849056604, Blast_Score=64, Evalue=9e-11,
Organism=Escherichia coli, GI1789266, Length=199, Percent_Identity=37.1859296482412, Blast_Score=117, Evalue=8e-28,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004254
- InterPro:   IPR005744 [H]

Pfam domain/function: PF03006 HlyIII [H]

EC number: NA

Molecular weight: Translated: 24863; Mature: 24732

Theoretical pI: Translated: 10.61; Mature: 10.61

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTELTITSQATDLAIAKPGRHYPTPAAKCADLVVHLAGLAFALMGGGILLGLAFGLGNLG
CCCEEEECCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
QVAAVSIYTVGLILMLSLSTAYNFAKARWRPLLRRFDHAGIFVMIAASYTPFTTQNLHGW
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCHH
WSIGMTTAVWTVAGVGVLAKLLLPGLDKRFWVGLYLALGWLVLVAIKPMIEGLSWPALLL
HHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH
LAIGGIVYSTGTIFYLMRRLKFRRAIWHGHVIGGAGLHYAAVLVGVVLTGAH
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
TELTITSQATDLAIAKPGRHYPTPAAKCADLVVHLAGLAFALMGGGILLGLAFGLGNLG
CCEEEECCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
QVAAVSIYTVGLILMLSLSTAYNFAKARWRPLLRRFDHAGIFVMIAASYTPFTTQNLHGW
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCHH
WSIGMTTAVWTVAGVGVLAKLLLPGLDKRFWVGLYLALGWLVLVAIKPMIEGLSWPALLL
HHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH
LAIGGIVYSTGTIFYLMRRLKFRRAIWHGHVIGGAGLHYAAVLVGVVLTGAH
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]