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The map label for this gene is rhtA [H]

Identifier: 16127698

GI number: 16127698

Start: 3712007

End: 3712879

Strand: Direct

Name: rhtA [H]

Synonym: CC_3468

Alternate gene names: 16127698

Gene position: 3712007-3712879 (Clockwise)

Preceding gene: 16127696

Following gene: 16127700

Centisome position: 92.41

GC content: 70.1

Gene sequence:

>873_bases
ATGCCCGGCGCCCGCGCTTCCTTCCTGCCCTATGCGGCGCTCCTGGCCGCGATCGTCACGCTGTGCGTGGGGACCTCGTT
CGCCAAGACCCTGTTCCCGCTGGTCGGCGCCCAAGGCGTCAGCGCCTATCGCGTCGGCTTCTCGGCCCTGATCCTGCTGG
CCATCTGGCGCCCCTGGCGTCATCGGCTCTCCGCCGCCGATCTCCGCGCCGTGGCGATGTACGGCGCGGTGATGGGGACG
ATGAACCTGTGCTTCTACATGTCGATCCGCACCATCCCGCTGGGCGTGGCGATCGCCATCGAGTTCATGGGCCCGCTGGT
CCTGGCGGTGGCCCACTCGCGGCGCCTGATCCATTTCGTCTGGATCGCCCTGGCGGTGCTGGGCCTCGGCCTGCTGCTGC
CGATCAATCCCGGCGCCGAGCCGCTGGATCCGGTGGGCGTCGCCTATGCCTGCGCGGCGGCGGTGATGTGGGCGCTGTAC
ATCATTCTGGGCAAGCGGGCGGCCCACCTGCATGCAGGGCGCTCGGTGGCGCTGGGCATGACCACGGCCGCGCTGATCGT
CGCCCCGATCGGCATCGTCTCGGCCGGGCCTGTGCTGTTTGATCCGAAGATCGCCGCCCTGGGGCTGGTGGTGGCGGTGC
TGTCCAGCGCCATCCCCTATTCGCTGGAGATGATCGCCCTGCGCGGCATCCCCAAGCGCAGCTTCGGCGTCCTGCTCAGT
CTGGAGCCGGCGGTCGGCGCCCTGGCGGGCCTGGCGATCCTGAACGAGCGGCTGAGCCTGACCCAATGGCTGGCCATCGC
CGCCATCGTCGCGGCCTCAGCCGGGACGATCCTCTCCACCCCCGCCGAAGCGGTCAGCGAGGATGTTCCCTGA

Upstream 100 bases:

>100_bases
CATCGGTCGCCATCATGTTCCAGCTTTGTTCGCGGATCAAGTCGGGCGGGCGACCGTGCGGCGTCTGGCCTTCCCAGCGC
CCTCCCCCTAAAGACGGACC

Downstream 100 bases:

>100_bases
TCTCTAGGGTCGTCCGCCGCGTGCGACGAACCAGCCGTTGCGGAAGCTCTGGTCGGCCTTGCCATAGAGGAACGGCGAAC
CGTCGGGCTGGGTGAAGGCG

Product: integral membrane protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 290; Mature: 289

Protein sequence:

>290_residues
MPGARASFLPYAALLAAIVTLCVGTSFAKTLFPLVGAQGVSAYRVGFSALILLAIWRPWRHRLSAADLRAVAMYGAVMGT
MNLCFYMSIRTIPLGVAIAIEFMGPLVLAVAHSRRLIHFVWIALAVLGLGLLLPINPGAEPLDPVGVAYACAAAVMWALY
IILGKRAAHLHAGRSVALGMTTAALIVAPIGIVSAGPVLFDPKIAALGLVVAVLSSAIPYSLEMIALRGIPKRSFGVLLS
LEPAVGALAGLAILNERLSLTQWLAIAAIVAASAGTILSTPAEAVSEDVP

Sequences:

>Translated_290_residues
MPGARASFLPYAALLAAIVTLCVGTSFAKTLFPLVGAQGVSAYRVGFSALILLAIWRPWRHRLSAADLRAVAMYGAVMGT
MNLCFYMSIRTIPLGVAIAIEFMGPLVLAVAHSRRLIHFVWIALAVLGLGLLLPINPGAEPLDPVGVAYACAAAVMWALY
IILGKRAAHLHAGRSVALGMTTAALIVAPIGIVSAGPVLFDPKIAALGLVVAVLSSAIPYSLEMIALRGIPKRSFGVLLS
LEPAVGALAGLAILNERLSLTQWLAIAAIVAASAGTILSTPAEAVSEDVP
>Mature_289_residues
PGARASFLPYAALLAAIVTLCVGTSFAKTLFPLVGAQGVSAYRVGFSALILLAIWRPWRHRLSAADLRAVAMYGAVMGTM
NLCFYMSIRTIPLGVAIAIEFMGPLVLAVAHSRRLIHFVWIALAVLGLGLLLPINPGAEPLDPVGVAYACAAAVMWALYI
ILGKRAAHLHAGRSVALGMTTAALIVAPIGIVSAGPVLFDPKIAALGLVVAVLSSAIPYSLEMIALRGIPKRSFGVLLSL
EPAVGALAGLAILNERLSLTQWLAIAAIVAASAGTILSTPAEAVSEDVP

Specific function: Unknown

COG id: COG5006

COG function: function code R; Predicted permease, DMT superfamily

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 DUF6 domains [H]

Homologues:

Organism=Escherichia coli, GI1787033, Length=292, Percent_Identity=46.2328767123288, Blast_Score=242, Evalue=2e-65,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000620 [H]

Pfam domain/function: PF00892 DUF6 [H]

EC number: NA

Molecular weight: Translated: 30047; Mature: 29915

Theoretical pI: Translated: 9.89; Mature: 9.89

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPGARASFLPYAALLAAIVTLCVGTSFAKTLFPLVGAQGVSAYRVGFSALILLAIWRPWR
CCCCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHH
HRLSAADLRAVAMYGAVMGTMNLCFYMSIRTIPLGVAIAIEFMGPLVLAVAHSRRLIHFV
HHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
WIALAVLGLGLLLPINPGAEPLDPVGVAYACAAAVMWALYIILGKRAAHLHAGRSVALGM
HHHHHHHHHHHEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCCHHHHH
TTAALIVAPIGIVSAGPVLFDPKIAALGLVVAVLSSAIPYSLEMIALRGIPKRSFGVLLS
HHHHHHHHHHHHHCCCCEEECCHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCEEEE
LEPAVGALAGLAILNERLSLTQWLAIAAIVAASAGTILSTPAEAVSEDVP
ECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHCCCHHHHCCCCC
>Mature Secondary Structure 
PGARASFLPYAALLAAIVTLCVGTSFAKTLFPLVGAQGVSAYRVGFSALILLAIWRPWR
CCCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHH
HRLSAADLRAVAMYGAVMGTMNLCFYMSIRTIPLGVAIAIEFMGPLVLAVAHSRRLIHFV
HHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
WIALAVLGLGLLLPINPGAEPLDPVGVAYACAAAVMWALYIILGKRAAHLHAGRSVALGM
HHHHHHHHHHHEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCCHHHHH
TTAALIVAPIGIVSAGPVLFDPKIAALGLVVAVLSSAIPYSLEMIALRGIPKRSFGVLLS
HHHHHHHHHHHHHCCCCEEECCHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCEEEE
LEPAVGALAGLAILNERLSLTQWLAIAAIVAASAGTILSTPAEAVSEDVP
ECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHCCCHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]