Click here to switch to the map view.

The map label for this gene is pinE [C]

Identifier: 16127601

GI number: 16127601

Start: 3618234

End: 3618743

Strand: Direct

Name: pinE [C]

Synonym: CC_3371

Alternate gene names: 16127601

Gene position: 3618234-3618743 (Clockwise)

Preceding gene: 16127600

Following gene: 16127607

Centisome position: 90.07

GC content: 70.39

Gene sequence:

>510_bases
GTGGGCGGTCGCGGTTTTCCCCTCGCCAGAGGGCGGCGGGTTTGCGATGGGCGGATGATGAAAGTCGTCGGCTACTACCG
CGTCCCGCCCGCGCCGGGGGTGTTCTTCAGCCCCGCCCAGGAGGAGCGCCTGCTGCTGCTGGGCTGCGAGCAGGTGTTCA
GTGACCGCTGCCTGGCCTCGGGCGTCGTGCGGCCGGGCCTCGAGCGCGCCCTTGAAGCCCTGGAGCCTGGCGGCGTGCTA
GGCGCACCCAGCCTGCACGCGCTTGGCGGCGATCTGGTCGCGGTGATGGACATCGTGCTGAAGCTGCGCGCGCGCGACCT
GCATCTCGTGATCCAGCAGCCCGAGATCGACACGCGTCAGAACTCTGGGTTCTTTGACGCCTGCCAGGCCCTGGCCGCCT
TCAACGGCGAGCGCGCCATGGTCCGCCGCGCCGAGACCGCCCTGGTCGCCAAGGGCGCCAAGGCGGGCGGGTTGAAGGGC
CTGAAGGCGGCCGAGGACAAATCCGAATAG

Upstream 100 bases:

>100_bases
TCGCGCCTGATCGGTCGTCCGACCACGCCTTGGACTGCGTTCGTCGCGGGCGTCCTGGAGTCGCTCTAGCCCCGCCTGAC
CGCGACCGCCCGCGAAGTCT

Downstream 100 bases:

>100_bases
CCCTCGTTTTCGTGTCATCCCGGATCGCCCCTGCGGGCCGTCCGGGATGACACGGGGATTGTCGGGCTCTGGGACAGCCC
CCTTAAACCTTCAACCGGTA

Product: DNA invertase

Products: NA

Alternate protein names: DNA Integration/Recombination/Inversion Protein

Number of amino acids: Translated: 169; Mature: 168

Protein sequence:

>169_residues
MGGRGFPLARGRRVCDGRMMKVVGYYRVPPAPGVFFSPAQEERLLLLGCEQVFSDRCLASGVVRPGLERALEALEPGGVL
GAPSLHALGGDLVAVMDIVLKLRARDLHLVIQQPEIDTRQNSGFFDACQALAAFNGERAMVRRAETALVAKGAKAGGLKG
LKAAEDKSE

Sequences:

>Translated_169_residues
MGGRGFPLARGRRVCDGRMMKVVGYYRVPPAPGVFFSPAQEERLLLLGCEQVFSDRCLASGVVRPGLERALEALEPGGVL
GAPSLHALGGDLVAVMDIVLKLRARDLHLVIQQPEIDTRQNSGFFDACQALAAFNGERAMVRRAETALVAKGAKAGGLKG
LKAAEDKSE
>Mature_168_residues
GGRGFPLARGRRVCDGRMMKVVGYYRVPPAPGVFFSPAQEERLLLLGCEQVFSDRCLASGVVRPGLERALEALEPGGVLG
APSLHALGGDLVAVMDIVLKLRARDLHLVIQQPEIDTRQNSGFFDACQALAAFNGERAMVRRAETALVAKGAKAGGLKGL
KAAEDKSE

Specific function: This Protein Catalyzes The Inversion Of An 1800-Bp E.Coli DNA Fragment, The P Region, Which Can Exist In Either Orientation. The Function Of The Inversion Is Not Yet Clear. [C]

COG id: COG1961

COG function: function code L; Site-specific recombinases, DNA invertase Pin homologs

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18015; Mature: 17884

Theoretical pI: Translated: 9.00; Mature: 9.00

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGGRGFPLARGRRVCDGRMMKVVGYYRVPPAPGVFFSPAQEERLLLLGCEQVFSDRCLAS
CCCCCCCHHCCCCCCCCHHHHHHHEEECCCCCCCEECCCCCCCEEEEEHHHHHHHHHHHH
GVVRPGLERALEALEPGGVLGAPSLHALGGDLVAVMDIVLKLRARDLHLVIQQPEIDTRQ
CCCCCCHHHHHHHHCCCCCCCCCCHHHHCCHHHHHHHHHHHHHCCCEEEEEECCCCCCCC
NSGFFDACQALAAFNGERAMVRRAETALVAKGAKAGGLKGLKAAEDKSE
CCCHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
GGRGFPLARGRRVCDGRMMKVVGYYRVPPAPGVFFSPAQEERLLLLGCEQVFSDRCLAS
CCCCCCHHCCCCCCCCHHHHHHHEEECCCCCCCEECCCCCCCEEEEEHHHHHHHHHHHH
GVVRPGLERALEALEPGGVLGAPSLHALGGDLVAVMDIVLKLRARDLHLVIQQPEIDTRQ
CCCCCCHHHHHHHHCCCCCCCCCCHHHHCCHHHHHHHHHHHHHCCCEEEEEECCCCCCCC
NSGFFDACQALAAFNGERAMVRRAETALVAKGAKAGGLKGLKAAEDKSE
CCCHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA