| Definition | Caulobacter crescentus CB15 chromosome, complete genome. |
|---|---|
| Accession | NC_002696 |
| Length | 4,016,947 |
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The map label for this gene is 16127485
Identifier: 16127485
GI number: 16127485
Start: 3516370
End: 3517212
Strand: Direct
Name: 16127485
Synonym: CC_3255
Alternate gene names: NA
Gene position: 3516370-3517212 (Clockwise)
Preceding gene: 16127484
Following gene: 16127486
Centisome position: 87.54
GC content: 67.97
Gene sequence:
>843_bases ATGACCCCTTCCGCCGGCCTTGGCCTCAAATCGCAGCACTATGGCGACGCGATCGCATGCGACGCCGAGGGCCTCTGGTT CGAGGTTCATCCTGAAAACTACATGTCCGCCGGAGGGCCCCGTCTCGCCGCTCTCGAAGCCGTGCGAGCGCGGCGTCCCG TCTCGCTACATGGCGTGGGGCTGTCTCTGGCGGCCGACACCGACCCGGATCCCGAGCATCTGCAAGCCCTGAAGCGGCTC GTCGATCGCTTCGACCCGTTCGTCGTTTCCGAACATCTGGCCTGGTCGACCCATCGCGGGGCGCATCATCCAGACCTCCT GCCCTTCCCCCGCACACGCGCCGCCCTCGACCGCATCTGCGGCAATGTCGCCCGGATGCAGGACGCCCTGCAGCGCCGCG TGCTCATCGAGAACCCCTCGCTCTACCTTCCGCTCAAGGGGCATGCGCTGGACGAGGTCGACTTTCTCGAGGCCCTGGCG ACCCGCACCGGCTGCGGACTGCTCGTGGACGTCAACAACGTCTTCGTCAGCGCCCAGAATCTCGGCTATGCGCCCGAGAC CTATCTGGACGCCCTGCCCGCTCACGCCATCGGTGAGATCCATCTGGCCGGGCACGCGCCGGATCCGGGCGGCTCAAACC TCCTGATCGACACCCACGGCGCGCCGGTCGCGGAGGTGGTTTGGACGCTGTATGCGCGCCTGATCGCGCGCATCGGGCCA CGCCCAACCCTGATCGAGCGTGACGACGACATTCCTGACTTCGCCGCCCTGATGGCCGAACGCAACCGCGCCGTCGCCGT GCTGGCGTCCGGCCAGACCGCTCGCGAGCCCGCGCATGTCTGA
Upstream 100 bases:
>100_bases GGCTCGCTGACGCCGAAGGCCTAACGCCGACCATCGTTCCCCGTCGCTTCCGGCCGCCCCCAAAGAGCGGTCGGGAGCGG CGCGCCTCGAAGATCAGACC
Downstream 100 bases:
>100_bases GTTGCTGGCCTTCCAGGACGCCTTTGTCGCCGCTCTCGCGGGCGAGGACGAGCGCCTTTCGCCTTGGTGCGCAGGGCACG ATACGCCTCAGGGTCTCGGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 280; Mature: 279
Protein sequence:
>280_residues MTPSAGLGLKSQHYGDAIACDAEGLWFEVHPENYMSAGGPRLAALEAVRARRPVSLHGVGLSLAADTDPDPEHLQALKRL VDRFDPFVVSEHLAWSTHRGAHHPDLLPFPRTRAALDRICGNVARMQDALQRRVLIENPSLYLPLKGHALDEVDFLEALA TRTGCGLLVDVNNVFVSAQNLGYAPETYLDALPAHAIGEIHLAGHAPDPGGSNLLIDTHGAPVAEVVWTLYARLIARIGP RPTLIERDDDIPDFAALMAERNRAVAVLASGQTAREPAHV
Sequences:
>Translated_280_residues MTPSAGLGLKSQHYGDAIACDAEGLWFEVHPENYMSAGGPRLAALEAVRARRPVSLHGVGLSLAADTDPDPEHLQALKRL VDRFDPFVVSEHLAWSTHRGAHHPDLLPFPRTRAALDRICGNVARMQDALQRRVLIENPSLYLPLKGHALDEVDFLEALA TRTGCGLLVDVNNVFVSAQNLGYAPETYLDALPAHAIGEIHLAGHAPDPGGSNLLIDTHGAPVAEVVWTLYARLIARIGP RPTLIERDDDIPDFAALMAERNRAVAVLASGQTAREPAHV >Mature_279_residues TPSAGLGLKSQHYGDAIACDAEGLWFEVHPENYMSAGGPRLAALEAVRARRPVSLHGVGLSLAADTDPDPEHLQALKRLV DRFDPFVVSEHLAWSTHRGAHHPDLLPFPRTRAALDRICGNVARMQDALQRRVLIENPSLYLPLKGHALDEVDFLEALAT RTGCGLLVDVNNVFVSAQNLGYAPETYLDALPAHAIGEIHLAGHAPDPGGSNLLIDTHGAPVAEVVWTLYARLIARIGPR PTLIERDDDIPDFAALMAERNRAVAVLASGQTAREPAHV
Specific function: Unknown
COG id: COG3220
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0276 family
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y3255_CAUCR (Q9A3E9)
Other databases:
- EMBL: AE005673 - PIR: E87652 - RefSeq: NP_422049.1 - ProteinModelPortal: Q9A3E9 - SMR: Q9A3E9 - GeneID: 943381 - GenomeReviews: AE005673_GR - KEGG: ccr:CC_3255 - NMPDR: fig|190650.1.peg.3229 - TIGR: CC_3255 - HOGENOM: HBG306331 - OMA: PLLIDSH - ProtClustDB: PRK05409 - HAMAP: MF_00697 - InterPro: IPR007801 - InterPro: IPR013022 - Gene3D: G3DSA:3.20.20.150
Pfam domain/function: PF05114 DUF692; SSF51658 Xyl_isomerase-like_TIM-brl
EC number: NA
Molecular weight: Translated: 30264; Mature: 30132
Theoretical pI: Translated: 6.00; Mature: 6.00
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTPSAGLGLKSQHYGDAIACDAEGLWFEVHPENYMSAGGPRLAALEAVRARRPVSLHGVG CCCCCCCCCCCCCCCCEEEECCCCCEEEECCHHHHCCCCCHHHHHHHHHHCCCCEEECCC LSLAADTDPDPEHLQALKRLVDRFDPFVVSEHLAWSTHRGAHHPDLLPFPRTRAALDRIC EEEECCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHH GNVARMQDALQRRVLIENPSLYLPLKGHALDEVDFLEALATRTGCGLLVDVNNVFVSAQN HHHHHHHHHHHHCEEECCCCEEEEECCCCCCHHHHHHHHHHHCCCEEEEECCCEEEEECC LGYAPETYLDALPAHAIGEIHLAGHAPDPGGSNLLIDTHGAPVAEVVWTLYARLIARIGP CCCCCHHHHHHCCCHHCCEEEEECCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHCCC RPTLIERDDDIPDFAALMAERNRAVAVLASGQTAREPAHV CCCEECCCCCCHHHHHHHHCCCCEEEEEECCCCCCCCCCC >Mature Secondary Structure TPSAGLGLKSQHYGDAIACDAEGLWFEVHPENYMSAGGPRLAALEAVRARRPVSLHGVG CCCCCCCCCCCCCCCEEEECCCCCEEEECCHHHHCCCCCHHHHHHHHHHCCCCEEECCC LSLAADTDPDPEHLQALKRLVDRFDPFVVSEHLAWSTHRGAHHPDLLPFPRTRAALDRIC EEEECCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHH GNVARMQDALQRRVLIENPSLYLPLKGHALDEVDFLEALATRTGCGLLVDVNNVFVSAQN HHHHHHHHHHHHCEEECCCCEEEEECCCCCCHHHHHHHHHHHCCCEEEEECCCEEEEECC LGYAPETYLDALPAHAIGEIHLAGHAPDPGGSNLLIDTHGAPVAEVVWTLYARLIARIGP CCCCCHHHHHHCCCHHCCEEEEECCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHCCC RPTLIERDDDIPDFAALMAERNRAVAVLASGQTAREPAHV CCCEECCCCCCHHHHHHHHCCCCEEEEEECCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11259647