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The map label for this gene is csgA [H]

Identifier: 16127209

GI number: 16127209

Start: 3198466

End: 3198903

Strand: Direct

Name: csgA [H]

Synonym: CC_2979

Alternate gene names: 16127209

Gene position: 3198466-3198903 (Clockwise)

Preceding gene: 16127208

Following gene: 16127210

Centisome position: 79.62

GC content: 72.37

Gene sequence:

>438_bases
ATGCGCGCGGTCAGCGCCGAGGCGATGCAGCGCCTGTTCGAGGTCAACGCCGTCATTCCCAGCCTGGTCGCCAAGCACCT
GGCGCCGCTACTGCCCAAGGACGAGCGCAGCGTCATCGCCGCCCTGTCGGCGCGGGTCGGCAGCATCGGCGACAACCGGC
TGGGCGGCTGGCACGCCTATCGCGCCAGCAAGGCGGCCCTGAACATGATGATCCGCTGCCAGGCGCTGGAGCTGCAACGC
GAGCGCCCGCTGGCCGTCTGCGTGGTGCTGCACCCCGGCACGGTCGCCACCGGTCTCAGCGCCCCCTTCGCCCGGTCGCC
CAAGACCCTGTTCACCCCCGACGACGCCGCCCAGCGCCTGCTCAAGGTGCTCTCGCGCCTGCAGCCGGCCGACAGCGGCG
GCTTCTTCGCCCACGACGGCCAGCCCATCCCCTGGTGA

Upstream 100 bases:

>100_bases
GGCCGACCTCGCCCGCCAGCTGCGCGAGCGGGGAACGCTCGGCCTGCTGCTGATCGCCACCGGCCTGCTGCACGACACCG
ACCTGACGCCCGAAAAGAGC

Downstream 100 bases:

>100_bases
GACGCTCGCCCCCTTCCCAACCCTTTTCGGAGACGCCCCGCATGTTGATCCCCAGCGATGTCGCCCGCGCCGTCCGCCGC
ACGACCACGACCTTCGTCCT

Product: C-factor

Products: NA

Alternate protein names: C signal [H]

Number of amino acids: Translated: 145; Mature: 145

Protein sequence:

>145_residues
MRAVSAEAMQRLFEVNAVIPSLVAKHLAPLLPKDERSVIAALSARVGSIGDNRLGGWHAYRASKAALNMMIRCQALELQR
ERPLAVCVVLHPGTVATGLSAPFARSPKTLFTPDDAAQRLLKVLSRLQPADSGGFFAHDGQPIPW

Sequences:

>Translated_145_residues
MRAVSAEAMQRLFEVNAVIPSLVAKHLAPLLPKDERSVIAALSARVGSIGDNRLGGWHAYRASKAALNMMIRCQALELQR
ERPLAVCVVLHPGTVATGLSAPFARSPKTLFTPDDAAQRLLKVLSRLQPADSGGFFAHDGQPIPW
>Mature_145_residues
MRAVSAEAMQRLFEVNAVIPSLVAKHLAPLLPKDERSVIAALSARVGSIGDNRLGGWHAYRASKAALNMMIRCQALELQR
ERPLAVCVVLHPGTVATGLSAPFARSPKTLFTPDDAAQRLLKVLSRLQPADSGGFFAHDGQPIPW

Specific function: Cell-cell signaling protein required for fruiting body morphogenesis. Necessary for cellular aggregation, for spore differentiation, and for gene expression that is initiated after 6 hour of starvation [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Secreted [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To yeast YKL071W [H]

Homologues:

Organism=Drosophila melanogaster, GI24640547, Length=159, Percent_Identity=34.5911949685535, Blast_Score=80, Evalue=3e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002198
- InterPro:   IPR002347
- InterPro:   IPR016040 [H]

Pfam domain/function: PF00106 adh_short [H]

EC number: NA

Molecular weight: Translated: 15645; Mature: 15645

Theoretical pI: Translated: 10.65; Mature: 10.65

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRAVSAEAMQRLFEVNAVIPSLVAKHLAPLLPKDERSVIAALSARVGSIGDNRLGGWHAY
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCCCHHHH
RASKAALNMMIRCQALELQRERPLAVCVVLHPGTVATGLSAPFARSPKTLFTPDDAAQRL
HHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCCCCCCCCCEECCCHHHHHH
LKVLSRLQPADSGGFFAHDGQPIPW
HHHHHHCCCCCCCCEECCCCCCCCC
>Mature Secondary Structure
MRAVSAEAMQRLFEVNAVIPSLVAKHLAPLLPKDERSVIAALSARVGSIGDNRLGGWHAY
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCCCHHHH
RASKAALNMMIRCQALELQRERPLAVCVVLHPGTVATGLSAPFARSPKTLFTPDDAAQRL
HHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCCCCCCCCCEECCCHHHHHH
LKVLSRLQPADSGGFFAHDGQPIPW
HHHHHHCCCCCCCCEECCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2152896; 2107980; 2118510; 1372277 [H]