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The map label for this gene is glxA [H]

Identifier: 16127190

GI number: 16127190

Start: 3183169

End: 3184107

Strand: Direct

Name: glxA [H]

Synonym: CC_2960

Alternate gene names: 16127190

Gene position: 3183169-3184107 (Clockwise)

Preceding gene: 16127188

Following gene: 16127195

Centisome position: 79.24

GC content: 71.88

Gene sequence:

>939_bases
ATGTCCCGCGCGATCGGCTTTCTCGTCTATCCGGGCTTCCAACTGCTGGACGCCACCGGCCCGATCGCGGCGTTCGAGAT
CGCCGGCCGGCTGGCGCCCGGCGCCTACAGCCTGCACTTTTTGTCGCTGCGCGGGGGTCTCATCCCCAGCACCTCGGGCA
TGGTCGTGCAGACCAAGGCCCTGGCCGAGGCCCCGCCGCTGGACACCCTGCTGATCGCCGGCGGCGACGCCGTGAAGGTT
CCGGCCAGTTGCCCCGAAACCCTGGCCTTTGTCCGCCAGGCCGGTCGCTCGGCGCGCCGCGTGGCCAGCGTCTGTTCGGG
AACCTATGTCCTGGCCGAGGCGGGCCTCTTGGACGGCAAGCGCGCCACCACCCACTGGAGCCGGACCAAGGACTTCCAGC
GCCGCTATCCGCATGTGCGGCTCGAGCCCGACCGCATCTGGATCCAGGACGGGGCGGTGTGGAGTTCGGCGGGCATCACC
GCCGGCATCGACCTGTCCCTGGCCCTGATCGGCGCCGACGAGGGCGAGGCCGTGGCCCGCCGCACAGCCCAGCAACTGGT
GGTCTATCACCACCGCCCGGGCGGCCAGTCACAGCACTCGGCGCTCATTGACCTGCGCCCCGGCCGCTTCGACGGCCTGC
TGTCCTGGGCGCGGCAGAACCTGTCTGAACCGCTGAGCGTCGAACAACTGGCCGACCGCGCCGCCATGAGCCCGCGCAAC
TTCGCCCGCCTGTTCGCCCAGGAAACCGGCGTCACCCCCGCCAAGGCCATCGAACGCCTGCGCGTCGAAGCCGCCCGCGC
CCTGCTCGACAGCCAGCCGCTGCAGGTCGAGGACGTGGCCCTGGAGACGGGCTTTGGCGATCCGGAGCGGATGCGGCGGG
CTTTCATCCGGGCGTTCGGACAGCCGCCGCAGGCGCTGCGGCGGGCGCGGGCGGGCTAG

Upstream 100 bases:

>100_bases
GCTCATGCGATGGTCTCCGTCACAATCGAGTGTGAAGATGACTCGACGGGGCGCTGGCGGAAATGACATAGTTCCCGCGA
TTTCAGCCAAGGCGTCCGCC

Downstream 100 bases:

>100_bases
CGGGGAGAAACGCCCCCTCCGTCACGCGGCTGCGCCGCGCGCCACCTCCCCCGCAAGCGGGGCAGGAGGGTTCGGTGTCC
TCCTCACCCGTGAACGGGGG

Product: AraC family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 312; Mature: 311

Protein sequence:

>312_residues
MSRAIGFLVYPGFQLLDATGPIAAFEIAGRLAPGAYSLHFLSLRGGLIPSTSGMVVQTKALAEAPPLDTLLIAGGDAVKV
PASCPETLAFVRQAGRSARRVASVCSGTYVLAEAGLLDGKRATTHWSRTKDFQRRYPHVRLEPDRIWIQDGAVWSSAGIT
AGIDLSLALIGADEGEAVARRTAQQLVVYHHRPGGQSQHSALIDLRPGRFDGLLSWARQNLSEPLSVEQLADRAAMSPRN
FARLFAQETGVTPAKAIERLRVEAARALLDSQPLQVEDVALETGFGDPERMRRAFIRAFGQPPQALRRARAG

Sequences:

>Translated_312_residues
MSRAIGFLVYPGFQLLDATGPIAAFEIAGRLAPGAYSLHFLSLRGGLIPSTSGMVVQTKALAEAPPLDTLLIAGGDAVKV
PASCPETLAFVRQAGRSARRVASVCSGTYVLAEAGLLDGKRATTHWSRTKDFQRRYPHVRLEPDRIWIQDGAVWSSAGIT
AGIDLSLALIGADEGEAVARRTAQQLVVYHHRPGGQSQHSALIDLRPGRFDGLLSWARQNLSEPLSVEQLADRAAMSPRN
FARLFAQETGVTPAKAIERLRVEAARALLDSQPLQVEDVALETGFGDPERMRRAFIRAFGQPPQALRRARAG
>Mature_311_residues
SRAIGFLVYPGFQLLDATGPIAAFEIAGRLAPGAYSLHFLSLRGGLIPSTSGMVVQTKALAEAPPLDTLLIAGGDAVKVP
ASCPETLAFVRQAGRSARRVASVCSGTYVLAEAGLLDGKRATTHWSRTKDFQRRYPHVRLEPDRIWIQDGAVWSSAGITA
GIDLSLALIGADEGEAVARRTAQQLVVYHHRPGGQSQHSALIDLRPGRFDGLLSWARQNLSEPLSVEQLADRAAMSPRNF
ARLFAQETGVTPAKAIERLRVEAARALLDSQPLQVEDVALETGFGDPERMRRAFIRAFGQPPQALRRARAG

Specific function: Positive Activator Of Genes Required For L-Rhamnose Utilization, Probably Of The Rhamnose Transporter Gene (Rhat). [C]

COG id: COG4977

COG function: function code K; Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH araC/xylS-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1790339, Length=105, Percent_Identity=32.3809523809524, Blast_Score=69, Evalue=3e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009057
- InterPro:   IPR012287
- InterPro:   IPR018062
- InterPro:   IPR020449
- InterPro:   IPR018060
- InterPro:   IPR002818 [H]

Pfam domain/function: PF01965 DJ-1_PfpI; PF00165 HTH_AraC [H]

EC number: NA

Molecular weight: Translated: 33664; Mature: 33533

Theoretical pI: Translated: 10.22; Mature: 10.22

Prosite motif: PS01124 HTH_ARAC_FAMILY_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSRAIGFLVYPGFQLLDATGPIAAFEIAGRLAPGAYSLHFLSLRGGLIPSTSGMVVQTKA
CCCCEEEEEECCHHEECCCCCCHHHHHHHCCCCCCEEEEEEEECCCCCCCCCCCEEEEHH
LAEAPPLDTLLIAGGDAVKVPASCPETLAFVRQAGRSARRVASVCSGTYVLAEAGLLDGK
HCCCCCCCEEEEECCCEEECCCCCHHHHHHHHHHCHHHHHHHHHHCCCEEEEECCCCCCC
RATTHWSRTKDFQRRYPHVRLEPDRIWIQDGAVWSSAGITAGIDLSLALIGADEGEAVAR
CCCCCCHHHHHHHHHCCCEEECCCEEEEECCCEEECCCCEECCCEEEEEEECCCCHHHHH
RTAQQLVVYHHRPGGQSQHSALIDLRPGRFDGLLSWARQNLSEPLSVEQLADRAAMSPRN
HHHHHHEEEEECCCCCCCCCEEEEECCCCHHHHHHHHHHCCCCCCCHHHHHHHHHCCHHH
FARLFAQETGVTPAKAIERLRVEAARALLDSQPLQVEDVALETGFGDPERMRRAFIRAFG
HHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCHHHHHHHHHHHHC
QPPQALRRARAG
CCHHHHHHHCCC
>Mature Secondary Structure 
SRAIGFLVYPGFQLLDATGPIAAFEIAGRLAPGAYSLHFLSLRGGLIPSTSGMVVQTKA
CCCEEEEEECCHHEECCCCCCHHHHHHHCCCCCCEEEEEEEECCCCCCCCCCCEEEEHH
LAEAPPLDTLLIAGGDAVKVPASCPETLAFVRQAGRSARRVASVCSGTYVLAEAGLLDGK
HCCCCCCCEEEEECCCEEECCCCCHHHHHHHHHHCHHHHHHHHHHCCCEEEEECCCCCCC
RATTHWSRTKDFQRRYPHVRLEPDRIWIQDGAVWSSAGITAGIDLSLALIGADEGEAVAR
CCCCCCHHHHHHHHHCCCEEECCCEEEEECCCEEECCCCEECCCEEEEEEECCCCHHHHH
RTAQQLVVYHHRPGGQSQHSALIDLRPGRFDGLLSWARQNLSEPLSVEQLADRAAMSPRN
HHHHHHEEEEECCCCCCCCCEEEEECCCCHHHHHHHHHHCCCCCCCHHHHHHHHHCCHHH
FARLFAQETGVTPAKAIERLRVEAARALLDSQPLQVEDVALETGFGDPERMRRAFIRAFG
HHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCHHHHHHHHHHHHC
QPPQALRRARAG
CCHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11481430 [H]